Molecular profiling, including TERT promoter mutations, of acral lentiginous melanomas

Detalhes bibliográficos
Autor(a) principal: Vazquez, Vinícius Lima
Data de Publicação: 2016
Outros Autores: Vicente, Anna L., Carloni, Adriana C., Berardinelli,Gustavo, Soares, Paula, Scapulatempo-Neto, Cristovam, Martinho, Olga, Reis, R. M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/45092
Resumo: Acral lentiginous melanoma (ALM) is the less common subtype with singular characterization. TERT (human telomerase reverse transcriptase) promoter mutations have being described as recurrent in melanomas and infrequent in ALM, but their real incidence and clinical relevance is unclear. The objectives of this study were to describe the prevalence of TERT promoter mutations in ALM, and correlate with the molecular profile of other drive genes and clinical features. Sixty-one samples from 48 patients with ALM were analyzed. After DNA isolation, the mutation profiles of the hotspot region of BRAF, NRAS, KIT, PDGFRA, and TERT genes were determined by PCR amplification followed by direct Sanger sequencing. KIT, PDGFRA, and VEGFR2 gene amplification was performed by quantitative PCR. Clinical information such as survival, clinical stage, and Breslow tumor classification were obtained from medical records. TERT promoter mutations were found in 9.3% of the cases, BRAF in 10.3%, NRAS in 7.5%, KIT in 20.7%, and PDGFRA in 14.8% of ALM. None of the cases showed KIT, PDGFRA, or VEGFR2 gene amplification. We found an association between KIT mutations and advanced Clark level (IV and V, P=0.043) and TERT promoter mutations with low mitotic index. No other significant associations were observed between mutation profile and patients' clinical features nor survival rates. Oncogenic TERT promoter mutations are present in a fraction of ALMs. No relevant associations were found between TERT mutation status and clinical/molecular features nor survival. Mutations of KIT and PDGFRA are the most common genetic alterations, and they can be therapeutic targets for these patients.
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spelling Molecular profiling, including TERT promoter mutations, of acral lentiginous melanomasAcral lentiginousMelanomaMolecular profileTERT promoter mutationScience & TechnologyAcral lentiginous melanoma (ALM) is the less common subtype with singular characterization. TERT (human telomerase reverse transcriptase) promoter mutations have being described as recurrent in melanomas and infrequent in ALM, but their real incidence and clinical relevance is unclear. The objectives of this study were to describe the prevalence of TERT promoter mutations in ALM, and correlate with the molecular profile of other drive genes and clinical features. Sixty-one samples from 48 patients with ALM were analyzed. After DNA isolation, the mutation profiles of the hotspot region of BRAF, NRAS, KIT, PDGFRA, and TERT genes were determined by PCR amplification followed by direct Sanger sequencing. KIT, PDGFRA, and VEGFR2 gene amplification was performed by quantitative PCR. Clinical information such as survival, clinical stage, and Breslow tumor classification were obtained from medical records. TERT promoter mutations were found in 9.3% of the cases, BRAF in 10.3%, NRAS in 7.5%, KIT in 20.7%, and PDGFRA in 14.8% of ALM. None of the cases showed KIT, PDGFRA, or VEGFR2 gene amplification. We found an association between KIT mutations and advanced Clark level (IV and V, P=0.043) and TERT promoter mutations with low mitotic index. No other significant associations were observed between mutation profile and patients' clinical features nor survival rates. Oncogenic TERT promoter mutations are present in a fraction of ALMs. No relevant associations were found between TERT mutation status and clinical/molecular features nor survival. Mutations of KIT and PDGFRA are the most common genetic alterations, and they can be therapeutic targets for these patients.This project was supported by FAPESP - Brazil (2012/4194-1) to Vinicius de Lima Vazquez.info:eu-repo/semantics/publishedVersionLippincott, Williams & WilkinsUniversidade do MinhoVazquez, Vinícius LimaVicente, Anna L.Carloni, Adriana C.Berardinelli,GustavoSoares, PaulaScapulatempo-Neto, CristovamMartinho, OlgaReis, R. M.20162016-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/45092engDe Lima Vazquez, V., Vicente, A. L., Carloni, A., Berardinelli, G., Soares, P., Scapulatempo, C., . . . Reis, R. M. (2016). Molecular profiling, including TERT promoter mutations, of acral lentiginous melanomas. Melanoma Research, 26(2), 93-99. doi: 10.1097/cmr.00000000000002220960-893110.1097/cmr.000000000000022226709572http://meta.wkhealth.com/pt/pt-core/template-journal/lwwgateway/media/landingpage.htm?issn=0960-8931&volume=26&issue=2&spage=93info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:18:24Zoai:repositorium.sdum.uminho.pt:1822/45092Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:11:13.877315Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Molecular profiling, including TERT promoter mutations, of acral lentiginous melanomas
title Molecular profiling, including TERT promoter mutations, of acral lentiginous melanomas
spellingShingle Molecular profiling, including TERT promoter mutations, of acral lentiginous melanomas
Vazquez, Vinícius Lima
Acral lentiginous
Melanoma
Molecular profile
TERT promoter mutation
Science & Technology
title_short Molecular profiling, including TERT promoter mutations, of acral lentiginous melanomas
title_full Molecular profiling, including TERT promoter mutations, of acral lentiginous melanomas
title_fullStr Molecular profiling, including TERT promoter mutations, of acral lentiginous melanomas
title_full_unstemmed Molecular profiling, including TERT promoter mutations, of acral lentiginous melanomas
title_sort Molecular profiling, including TERT promoter mutations, of acral lentiginous melanomas
author Vazquez, Vinícius Lima
author_facet Vazquez, Vinícius Lima
Vicente, Anna L.
Carloni, Adriana C.
Berardinelli,Gustavo
Soares, Paula
Scapulatempo-Neto, Cristovam
Martinho, Olga
Reis, R. M.
author_role author
author2 Vicente, Anna L.
Carloni, Adriana C.
Berardinelli,Gustavo
Soares, Paula
Scapulatempo-Neto, Cristovam
Martinho, Olga
Reis, R. M.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Vazquez, Vinícius Lima
Vicente, Anna L.
Carloni, Adriana C.
Berardinelli,Gustavo
Soares, Paula
Scapulatempo-Neto, Cristovam
Martinho, Olga
Reis, R. M.
dc.subject.por.fl_str_mv Acral lentiginous
Melanoma
Molecular profile
TERT promoter mutation
Science & Technology
topic Acral lentiginous
Melanoma
Molecular profile
TERT promoter mutation
Science & Technology
description Acral lentiginous melanoma (ALM) is the less common subtype with singular characterization. TERT (human telomerase reverse transcriptase) promoter mutations have being described as recurrent in melanomas and infrequent in ALM, but their real incidence and clinical relevance is unclear. The objectives of this study were to describe the prevalence of TERT promoter mutations in ALM, and correlate with the molecular profile of other drive genes and clinical features. Sixty-one samples from 48 patients with ALM were analyzed. After DNA isolation, the mutation profiles of the hotspot region of BRAF, NRAS, KIT, PDGFRA, and TERT genes were determined by PCR amplification followed by direct Sanger sequencing. KIT, PDGFRA, and VEGFR2 gene amplification was performed by quantitative PCR. Clinical information such as survival, clinical stage, and Breslow tumor classification were obtained from medical records. TERT promoter mutations were found in 9.3% of the cases, BRAF in 10.3%, NRAS in 7.5%, KIT in 20.7%, and PDGFRA in 14.8% of ALM. None of the cases showed KIT, PDGFRA, or VEGFR2 gene amplification. We found an association between KIT mutations and advanced Clark level (IV and V, P=0.043) and TERT promoter mutations with low mitotic index. No other significant associations were observed between mutation profile and patients' clinical features nor survival rates. Oncogenic TERT promoter mutations are present in a fraction of ALMs. No relevant associations were found between TERT mutation status and clinical/molecular features nor survival. Mutations of KIT and PDGFRA are the most common genetic alterations, and they can be therapeutic targets for these patients.
publishDate 2016
dc.date.none.fl_str_mv 2016
2016-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/45092
url http://hdl.handle.net/1822/45092
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv De Lima Vazquez, V., Vicente, A. L., Carloni, A., Berardinelli, G., Soares, P., Scapulatempo, C., . . . Reis, R. M. (2016). Molecular profiling, including TERT promoter mutations, of acral lentiginous melanomas. Melanoma Research, 26(2), 93-99. doi: 10.1097/cmr.0000000000000222
0960-8931
10.1097/cmr.0000000000000222
26709572
http://meta.wkhealth.com/pt/pt-core/template-journal/lwwgateway/media/landingpage.htm?issn=0960-8931&volume=26&issue=2&spage=93
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Lippincott, Williams & Wilkins
publisher.none.fl_str_mv Lippincott, Williams & Wilkins
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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