Grapevine and wine metabolomics-based guidelines for fair data and metadata management
Autor(a) principal: | |
---|---|
Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.14/36044 |
Resumo: | In the era of big and omics data, good organization, management, and description of experimental data are crucial for achieving high-quality datasets. This, in turn, is essential for the export of robust results, to publish reliable papers, make data more easily available, and unlock the huge potential of data reuse. Lately, more and more journals now require authors to share data and metadata according to the FAIR (Findable, Accessible, Interoperable, Reusable) principles. This work aims to provide a step-by-step guideline for the FAIR data and metadata management specific to grapevine and wine science. In detail, the guidelines include recommendations for the organization of data and metadata regarding (i) meaningful information on experimental design and phenotyping, (ii) sample collection, (iii) sample preparation, (iv) chemotype analysis, (v) data analysis (vi) metabolite annotation, and (vii) basic ontologies. We hope that these guidelines will be helpful for the grapevine and wine metabolomics community and that it will benefit from the true potential of data usage in creating new knowledge being revealed. |
id |
RCAP_bb74a4cb426b38ae40f9013081c65f5e |
---|---|
oai_identifier_str |
oai:repositorio.ucp.pt:10400.14/36044 |
network_acronym_str |
RCAP |
network_name_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository_id_str |
7160 |
spelling |
Grapevine and wine metabolomics-based guidelines for fair data and metadata managementChromatographyMass spectrometryMetabolitesOmicsOpen-dataPlantsVitisWineIn the era of big and omics data, good organization, management, and description of experimental data are crucial for achieving high-quality datasets. This, in turn, is essential for the export of robust results, to publish reliable papers, make data more easily available, and unlock the huge potential of data reuse. Lately, more and more journals now require authors to share data and metadata according to the FAIR (Findable, Accessible, Interoperable, Reusable) principles. This work aims to provide a step-by-step guideline for the FAIR data and metadata management specific to grapevine and wine science. In detail, the guidelines include recommendations for the organization of data and metadata regarding (i) meaningful information on experimental design and phenotyping, (ii) sample collection, (iii) sample preparation, (iv) chemotype analysis, (v) data analysis (vi) metabolite annotation, and (vii) basic ontologies. We hope that these guidelines will be helpful for the grapevine and wine metabolomics community and that it will benefit from the true potential of data usage in creating new knowledge being revealed.Veritati - Repositório Institucional da Universidade Católica PortuguesaSavoi, StefaniaArapitsas, PanagiotisDuchêne, ÉricNikolantonaki, MariaOntañón, IgnacioCarlin, SilviaSchwander, FlorianGougeon, Régis D.Ferreira, António César SilvaTheodoridis, GeorgiosTöpfer, ReinhardVrhovsek, UrskaAdam-Blondon, Anne FrancoisePezzotti, MarioMattivi, Fulvio2021-11-24T16:01:25Z2021-112021-11-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.14/36044eng2218-198910.3390/metabo111107578511893870134822415000725112700001info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-12-12T01:34:46Zoai:repositorio.ucp.pt:10400.14/36044Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:29:16.233267Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Grapevine and wine metabolomics-based guidelines for fair data and metadata management |
title |
Grapevine and wine metabolomics-based guidelines for fair data and metadata management |
spellingShingle |
Grapevine and wine metabolomics-based guidelines for fair data and metadata management Savoi, Stefania Chromatography Mass spectrometry Metabolites Omics Open-data Plants Vitis Wine |
title_short |
Grapevine and wine metabolomics-based guidelines for fair data and metadata management |
title_full |
Grapevine and wine metabolomics-based guidelines for fair data and metadata management |
title_fullStr |
Grapevine and wine metabolomics-based guidelines for fair data and metadata management |
title_full_unstemmed |
Grapevine and wine metabolomics-based guidelines for fair data and metadata management |
title_sort |
Grapevine and wine metabolomics-based guidelines for fair data and metadata management |
author |
Savoi, Stefania |
author_facet |
Savoi, Stefania Arapitsas, Panagiotis Duchêne, Éric Nikolantonaki, Maria Ontañón, Ignacio Carlin, Silvia Schwander, Florian Gougeon, Régis D. Ferreira, António César Silva Theodoridis, Georgios Töpfer, Reinhard Vrhovsek, Urska Adam-Blondon, Anne Francoise Pezzotti, Mario Mattivi, Fulvio |
author_role |
author |
author2 |
Arapitsas, Panagiotis Duchêne, Éric Nikolantonaki, Maria Ontañón, Ignacio Carlin, Silvia Schwander, Florian Gougeon, Régis D. Ferreira, António César Silva Theodoridis, Georgios Töpfer, Reinhard Vrhovsek, Urska Adam-Blondon, Anne Francoise Pezzotti, Mario Mattivi, Fulvio |
author2_role |
author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Veritati - Repositório Institucional da Universidade Católica Portuguesa |
dc.contributor.author.fl_str_mv |
Savoi, Stefania Arapitsas, Panagiotis Duchêne, Éric Nikolantonaki, Maria Ontañón, Ignacio Carlin, Silvia Schwander, Florian Gougeon, Régis D. Ferreira, António César Silva Theodoridis, Georgios Töpfer, Reinhard Vrhovsek, Urska Adam-Blondon, Anne Francoise Pezzotti, Mario Mattivi, Fulvio |
dc.subject.por.fl_str_mv |
Chromatography Mass spectrometry Metabolites Omics Open-data Plants Vitis Wine |
topic |
Chromatography Mass spectrometry Metabolites Omics Open-data Plants Vitis Wine |
description |
In the era of big and omics data, good organization, management, and description of experimental data are crucial for achieving high-quality datasets. This, in turn, is essential for the export of robust results, to publish reliable papers, make data more easily available, and unlock the huge potential of data reuse. Lately, more and more journals now require authors to share data and metadata according to the FAIR (Findable, Accessible, Interoperable, Reusable) principles. This work aims to provide a step-by-step guideline for the FAIR data and metadata management specific to grapevine and wine science. In detail, the guidelines include recommendations for the organization of data and metadata regarding (i) meaningful information on experimental design and phenotyping, (ii) sample collection, (iii) sample preparation, (iv) chemotype analysis, (v) data analysis (vi) metabolite annotation, and (vii) basic ontologies. We hope that these guidelines will be helpful for the grapevine and wine metabolomics community and that it will benefit from the true potential of data usage in creating new knowledge being revealed. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-11-24T16:01:25Z 2021-11 2021-11-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.14/36044 |
url |
http://hdl.handle.net/10400.14/36044 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
2218-1989 10.3390/metabo11110757 85118938701 34822415 000725112700001 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
|
_version_ |
1799132012691324928 |