Grapevine and wine metabolomics-based guidelines for fair data and metadata management

Detalhes bibliográficos
Autor(a) principal: Savoi, Stefania
Data de Publicação: 2021
Outros Autores: Arapitsas, Panagiotis, Duchêne, Éric, Nikolantonaki, Maria, Ontañón, Ignacio, Carlin, Silvia, Schwander, Florian, Gougeon, Régis D., Ferreira, António César Silva, Theodoridis, Georgios, Töpfer, Reinhard, Vrhovsek, Urska, Adam-Blondon, Anne Francoise, Pezzotti, Mario, Mattivi, Fulvio
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.14/36044
Resumo: In the era of big and omics data, good organization, management, and description of experimental data are crucial for achieving high-quality datasets. This, in turn, is essential for the export of robust results, to publish reliable papers, make data more easily available, and unlock the huge potential of data reuse. Lately, more and more journals now require authors to share data and metadata according to the FAIR (Findable, Accessible, Interoperable, Reusable) principles. This work aims to provide a step-by-step guideline for the FAIR data and metadata management specific to grapevine and wine science. In detail, the guidelines include recommendations for the organization of data and metadata regarding (i) meaningful information on experimental design and phenotyping, (ii) sample collection, (iii) sample preparation, (iv) chemotype analysis, (v) data analysis (vi) metabolite annotation, and (vii) basic ontologies. We hope that these guidelines will be helpful for the grapevine and wine metabolomics community and that it will benefit from the true potential of data usage in creating new knowledge being revealed.
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spelling Grapevine and wine metabolomics-based guidelines for fair data and metadata managementChromatographyMass spectrometryMetabolitesOmicsOpen-dataPlantsVitisWineIn the era of big and omics data, good organization, management, and description of experimental data are crucial for achieving high-quality datasets. This, in turn, is essential for the export of robust results, to publish reliable papers, make data more easily available, and unlock the huge potential of data reuse. Lately, more and more journals now require authors to share data and metadata according to the FAIR (Findable, Accessible, Interoperable, Reusable) principles. This work aims to provide a step-by-step guideline for the FAIR data and metadata management specific to grapevine and wine science. In detail, the guidelines include recommendations for the organization of data and metadata regarding (i) meaningful information on experimental design and phenotyping, (ii) sample collection, (iii) sample preparation, (iv) chemotype analysis, (v) data analysis (vi) metabolite annotation, and (vii) basic ontologies. We hope that these guidelines will be helpful for the grapevine and wine metabolomics community and that it will benefit from the true potential of data usage in creating new knowledge being revealed.Veritati - Repositório Institucional da Universidade Católica PortuguesaSavoi, StefaniaArapitsas, PanagiotisDuchêne, ÉricNikolantonaki, MariaOntañón, IgnacioCarlin, SilviaSchwander, FlorianGougeon, Régis D.Ferreira, António César SilvaTheodoridis, GeorgiosTöpfer, ReinhardVrhovsek, UrskaAdam-Blondon, Anne FrancoisePezzotti, MarioMattivi, Fulvio2021-11-24T16:01:25Z2021-112021-11-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.14/36044eng2218-198910.3390/metabo111107578511893870134822415000725112700001info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-12-12T01:34:46Zoai:repositorio.ucp.pt:10400.14/36044Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:29:16.233267Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Grapevine and wine metabolomics-based guidelines for fair data and metadata management
title Grapevine and wine metabolomics-based guidelines for fair data and metadata management
spellingShingle Grapevine and wine metabolomics-based guidelines for fair data and metadata management
Savoi, Stefania
Chromatography
Mass spectrometry
Metabolites
Omics
Open-data
Plants
Vitis
Wine
title_short Grapevine and wine metabolomics-based guidelines for fair data and metadata management
title_full Grapevine and wine metabolomics-based guidelines for fair data and metadata management
title_fullStr Grapevine and wine metabolomics-based guidelines for fair data and metadata management
title_full_unstemmed Grapevine and wine metabolomics-based guidelines for fair data and metadata management
title_sort Grapevine and wine metabolomics-based guidelines for fair data and metadata management
author Savoi, Stefania
author_facet Savoi, Stefania
Arapitsas, Panagiotis
Duchêne, Éric
Nikolantonaki, Maria
Ontañón, Ignacio
Carlin, Silvia
Schwander, Florian
Gougeon, Régis D.
Ferreira, António César Silva
Theodoridis, Georgios
Töpfer, Reinhard
Vrhovsek, Urska
Adam-Blondon, Anne Francoise
Pezzotti, Mario
Mattivi, Fulvio
author_role author
author2 Arapitsas, Panagiotis
Duchêne, Éric
Nikolantonaki, Maria
Ontañón, Ignacio
Carlin, Silvia
Schwander, Florian
Gougeon, Régis D.
Ferreira, António César Silva
Theodoridis, Georgios
Töpfer, Reinhard
Vrhovsek, Urska
Adam-Blondon, Anne Francoise
Pezzotti, Mario
Mattivi, Fulvio
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Veritati - Repositório Institucional da Universidade Católica Portuguesa
dc.contributor.author.fl_str_mv Savoi, Stefania
Arapitsas, Panagiotis
Duchêne, Éric
Nikolantonaki, Maria
Ontañón, Ignacio
Carlin, Silvia
Schwander, Florian
Gougeon, Régis D.
Ferreira, António César Silva
Theodoridis, Georgios
Töpfer, Reinhard
Vrhovsek, Urska
Adam-Blondon, Anne Francoise
Pezzotti, Mario
Mattivi, Fulvio
dc.subject.por.fl_str_mv Chromatography
Mass spectrometry
Metabolites
Omics
Open-data
Plants
Vitis
Wine
topic Chromatography
Mass spectrometry
Metabolites
Omics
Open-data
Plants
Vitis
Wine
description In the era of big and omics data, good organization, management, and description of experimental data are crucial for achieving high-quality datasets. This, in turn, is essential for the export of robust results, to publish reliable papers, make data more easily available, and unlock the huge potential of data reuse. Lately, more and more journals now require authors to share data and metadata according to the FAIR (Findable, Accessible, Interoperable, Reusable) principles. This work aims to provide a step-by-step guideline for the FAIR data and metadata management specific to grapevine and wine science. In detail, the guidelines include recommendations for the organization of data and metadata regarding (i) meaningful information on experimental design and phenotyping, (ii) sample collection, (iii) sample preparation, (iv) chemotype analysis, (v) data analysis (vi) metabolite annotation, and (vii) basic ontologies. We hope that these guidelines will be helpful for the grapevine and wine metabolomics community and that it will benefit from the true potential of data usage in creating new knowledge being revealed.
publishDate 2021
dc.date.none.fl_str_mv 2021-11-24T16:01:25Z
2021-11
2021-11-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.14/36044
url http://hdl.handle.net/10400.14/36044
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2218-1989
10.3390/metabo11110757
85118938701
34822415
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eu_rights_str_mv openAccess
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dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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