Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia
Autor(a) principal: | |
---|---|
Data de Publicação: | 2017 |
Outros Autores: | , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.18/4790 |
Resumo: | Inherited deletions of α-globin genes and/or their upstream regulatory elements (MCSs) give rise to α-thalassemia, an autosomal recessive microcytic hypochromic anemia. In this study, Multiplex Ligation-dependent Probe Amplification performed with commercial and synthetic engineered probes, Gap-PCR, and DNA sequencing were used to characterize lesions in the subtelomeric region of the short arm of chromosome 16, possibly explaining the α-thalassemia/HbH disease phenotype in ten patients. We have found six different deletions, in heterozygosity, ranging from approximately 3.3 to 323 kb, two of them not previously described. The deletions fall into two categories: one includes deletions which totally remove the α-globin gene cluster, whereas the other includes deletions removing only the distal regulatory elements and keeping the α-globin genes structurally intact. An indel was observed in one patient involving the loss of the MCS-R2 and the insertion of 39 bp originated from a complex rearrangement spanning the deletion breakpoints. Finally, in another case no α-globin gene cluster deletion was found and the patient revealed to be a very unusual case of acquired alpha-thalassemia-myelodysplastic syndrome. This study further illustrates the diversity of genomic lesions and underlying molecular mechanisms leading to α-thalassemia. |
id |
RCAP_c16277d056f6ba3765da77511ddd94de |
---|---|
oai_identifier_str |
oai:repositorio.insa.pt:10400.18/4790 |
network_acronym_str |
RCAP |
network_name_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository_id_str |
7160 |
spelling |
Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemiaATMDSAcquired HbHAlpha-thalassemiaMLPANovel DeletionsTalassemiaDoenças RarasDoenças GenéticasHemoglobinopatiasHemoglobina HMLPAInherited deletions of α-globin genes and/or their upstream regulatory elements (MCSs) give rise to α-thalassemia, an autosomal recessive microcytic hypochromic anemia. In this study, Multiplex Ligation-dependent Probe Amplification performed with commercial and synthetic engineered probes, Gap-PCR, and DNA sequencing were used to characterize lesions in the subtelomeric region of the short arm of chromosome 16, possibly explaining the α-thalassemia/HbH disease phenotype in ten patients. We have found six different deletions, in heterozygosity, ranging from approximately 3.3 to 323 kb, two of them not previously described. The deletions fall into two categories: one includes deletions which totally remove the α-globin gene cluster, whereas the other includes deletions removing only the distal regulatory elements and keeping the α-globin genes structurally intact. An indel was observed in one patient involving the loss of the MCS-R2 and the insertion of 39 bp originated from a complex rearrangement spanning the deletion breakpoints. Finally, in another case no α-globin gene cluster deletion was found and the patient revealed to be a very unusual case of acquired alpha-thalassemia-myelodysplastic syndrome. This study further illustrates the diversity of genomic lesions and underlying molecular mechanisms leading to α-thalassemia.Springer VerlagRepositório Científico do Instituto Nacional de SaúdeFerrão, JoséSilva, MarisaGonçalves, LúciaGomes, SusanaLoureiro, PedroCoelho, AndreiaMiranda, ArmandinaSeuanes, FilomenaReis, Ana BatalhaPina, FranciscaMaia, RaquelKjollerstrom, PaulaMonteiro, EstelaLacerda, João F.Lavinha, JoãoGonçalves, JoãoFaustino, Paula2018-09-01T00:30:11Z2017-09-082017-09-08T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/4790engAnn Hematol. 2017 Nov;96(11):1921-1929. doi: 10.1007/s00277-017-3090-y. Epub 2017 Sep 8.0939-5555ESSN: 1432-058410.1007/s00277-017-3090-yinfo:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:40:33Zoai:repositorio.insa.pt:10400.18/4790Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:39:36.162778Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia |
title |
Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia |
spellingShingle |
Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia Ferrão, José ATMDS Acquired HbH Alpha-thalassemia MLPA Novel Deletions Talassemia Doenças Raras Doenças Genéticas Hemoglobinopatias Hemoglobina H MLPA |
title_short |
Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia |
title_full |
Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia |
title_fullStr |
Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia |
title_full_unstemmed |
Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia |
title_sort |
Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia |
author |
Ferrão, José |
author_facet |
Ferrão, José Silva, Marisa Gonçalves, Lúcia Gomes, Susana Loureiro, Pedro Coelho, Andreia Miranda, Armandina Seuanes, Filomena Reis, Ana Batalha Pina, Francisca Maia, Raquel Kjollerstrom, Paula Monteiro, Estela Lacerda, João F. Lavinha, João Gonçalves, João Faustino, Paula |
author_role |
author |
author2 |
Silva, Marisa Gonçalves, Lúcia Gomes, Susana Loureiro, Pedro Coelho, Andreia Miranda, Armandina Seuanes, Filomena Reis, Ana Batalha Pina, Francisca Maia, Raquel Kjollerstrom, Paula Monteiro, Estela Lacerda, João F. Lavinha, João Gonçalves, João Faustino, Paula |
author2_role |
author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Repositório Científico do Instituto Nacional de Saúde |
dc.contributor.author.fl_str_mv |
Ferrão, José Silva, Marisa Gonçalves, Lúcia Gomes, Susana Loureiro, Pedro Coelho, Andreia Miranda, Armandina Seuanes, Filomena Reis, Ana Batalha Pina, Francisca Maia, Raquel Kjollerstrom, Paula Monteiro, Estela Lacerda, João F. Lavinha, João Gonçalves, João Faustino, Paula |
dc.subject.por.fl_str_mv |
ATMDS Acquired HbH Alpha-thalassemia MLPA Novel Deletions Talassemia Doenças Raras Doenças Genéticas Hemoglobinopatias Hemoglobina H MLPA |
topic |
ATMDS Acquired HbH Alpha-thalassemia MLPA Novel Deletions Talassemia Doenças Raras Doenças Genéticas Hemoglobinopatias Hemoglobina H MLPA |
description |
Inherited deletions of α-globin genes and/or their upstream regulatory elements (MCSs) give rise to α-thalassemia, an autosomal recessive microcytic hypochromic anemia. In this study, Multiplex Ligation-dependent Probe Amplification performed with commercial and synthetic engineered probes, Gap-PCR, and DNA sequencing were used to characterize lesions in the subtelomeric region of the short arm of chromosome 16, possibly explaining the α-thalassemia/HbH disease phenotype in ten patients. We have found six different deletions, in heterozygosity, ranging from approximately 3.3 to 323 kb, two of them not previously described. The deletions fall into two categories: one includes deletions which totally remove the α-globin gene cluster, whereas the other includes deletions removing only the distal regulatory elements and keeping the α-globin genes structurally intact. An indel was observed in one patient involving the loss of the MCS-R2 and the insertion of 39 bp originated from a complex rearrangement spanning the deletion breakpoints. Finally, in another case no α-globin gene cluster deletion was found and the patient revealed to be a very unusual case of acquired alpha-thalassemia-myelodysplastic syndrome. This study further illustrates the diversity of genomic lesions and underlying molecular mechanisms leading to α-thalassemia. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-09-08 2017-09-08T00:00:00Z 2018-09-01T00:30:11Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.18/4790 |
url |
http://hdl.handle.net/10400.18/4790 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Ann Hematol. 2017 Nov;96(11):1921-1929. doi: 10.1007/s00277-017-3090-y. Epub 2017 Sep 8. 0939-5555 ESSN: 1432-0584 10.1007/s00277-017-3090-y |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/embargoedAccess |
eu_rights_str_mv |
embargoedAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Springer Verlag |
publisher.none.fl_str_mv |
Springer Verlag |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
|
_version_ |
1817554289249222656 |