Sizing and counting of Saccharomyces cerevisiae floc populations by image analysis, using an automatically calculated threshold

Detalhes bibliográficos
Autor(a) principal: Vicente, A. A.
Data de Publicação: 1996
Outros Autores: Meinders, J., Teixeira, J. A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/31881
Resumo: A standardized image analysis method has been developed permitting determination of the number of yeast flocs and their size distribution. The method includes image grabbing, image enhancement, automatic determination of the appropriate threshold, curve fitting of the areahistogram, determination of the mean single floc area and its standard deviation, and floc counting. The extension of the method to other applications is immediate and straightforward. Two Saccharomyces cerevisiae floc Populations (with ages of 48 and 72 h) were analyzed. The results showed a variation around the mean of 9%-12% for the single floc mean area, 6%-7% for the number of single flocs, and 5%-6% for the total number of flocs. Aggregates of two flocs (doublets) and three flocs (triplets) were enumerated. The correctness of the method was checked by analyzing the parameters of interest as a function of the threshold. The constant correlation between the parameters and the threshold showed the validity and consistency of the method. (c) 1996 John Wiley & Sons, Inc.
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spelling Sizing and counting of Saccharomyces cerevisiae floc populations by image analysis, using an automatically calculated thresholdimage analysisSaccharomyces cerevisiae flocflee countingfloc countingScience & TechnologyA standardized image analysis method has been developed permitting determination of the number of yeast flocs and their size distribution. The method includes image grabbing, image enhancement, automatic determination of the appropriate threshold, curve fitting of the areahistogram, determination of the mean single floc area and its standard deviation, and floc counting. The extension of the method to other applications is immediate and straightforward. Two Saccharomyces cerevisiae floc Populations (with ages of 48 and 72 h) were analyzed. The results showed a variation around the mean of 9%-12% for the single floc mean area, 6%-7% for the number of single flocs, and 5%-6% for the total number of flocs. Aggregates of two flocs (doublets) and three flocs (triplets) were enumerated. The correctness of the method was checked by analyzing the parameters of interest as a function of the threshold. The constant correlation between the parameters and the threshold showed the validity and consistency of the method. (c) 1996 John Wiley & Sons, Inc.WileyUniversidade do MinhoVicente, A. A.Meinders, J.Teixeira, J. A.19961996-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/31881eng0006-35921097-029010.1002/bit.260510602http://onlinelibrary.wiley.com/journal/10.1002/(ISSN)1097-0290info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:27:42Zoai:repositorium.sdum.uminho.pt:1822/31881Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:22:21.979984Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Sizing and counting of Saccharomyces cerevisiae floc populations by image analysis, using an automatically calculated threshold
title Sizing and counting of Saccharomyces cerevisiae floc populations by image analysis, using an automatically calculated threshold
spellingShingle Sizing and counting of Saccharomyces cerevisiae floc populations by image analysis, using an automatically calculated threshold
Vicente, A. A.
image analysis
Saccharomyces cerevisiae floc
flee counting
floc counting
Science & Technology
title_short Sizing and counting of Saccharomyces cerevisiae floc populations by image analysis, using an automatically calculated threshold
title_full Sizing and counting of Saccharomyces cerevisiae floc populations by image analysis, using an automatically calculated threshold
title_fullStr Sizing and counting of Saccharomyces cerevisiae floc populations by image analysis, using an automatically calculated threshold
title_full_unstemmed Sizing and counting of Saccharomyces cerevisiae floc populations by image analysis, using an automatically calculated threshold
title_sort Sizing and counting of Saccharomyces cerevisiae floc populations by image analysis, using an automatically calculated threshold
author Vicente, A. A.
author_facet Vicente, A. A.
Meinders, J.
Teixeira, J. A.
author_role author
author2 Meinders, J.
Teixeira, J. A.
author2_role author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Vicente, A. A.
Meinders, J.
Teixeira, J. A.
dc.subject.por.fl_str_mv image analysis
Saccharomyces cerevisiae floc
flee counting
floc counting
Science & Technology
topic image analysis
Saccharomyces cerevisiae floc
flee counting
floc counting
Science & Technology
description A standardized image analysis method has been developed permitting determination of the number of yeast flocs and their size distribution. The method includes image grabbing, image enhancement, automatic determination of the appropriate threshold, curve fitting of the areahistogram, determination of the mean single floc area and its standard deviation, and floc counting. The extension of the method to other applications is immediate and straightforward. Two Saccharomyces cerevisiae floc Populations (with ages of 48 and 72 h) were analyzed. The results showed a variation around the mean of 9%-12% for the single floc mean area, 6%-7% for the number of single flocs, and 5%-6% for the total number of flocs. Aggregates of two flocs (doublets) and three flocs (triplets) were enumerated. The correctness of the method was checked by analyzing the parameters of interest as a function of the threshold. The constant correlation between the parameters and the threshold showed the validity and consistency of the method. (c) 1996 John Wiley & Sons, Inc.
publishDate 1996
dc.date.none.fl_str_mv 1996
1996-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/31881
url http://hdl.handle.net/1822/31881
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0006-3592
1097-0290
10.1002/bit.260510602
http://onlinelibrary.wiley.com/journal/10.1002/(ISSN)1097-0290
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dc.publisher.none.fl_str_mv Wiley
publisher.none.fl_str_mv Wiley
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