Transferability and use of microsatellite markers for the genetic analysis of the germplasm of some Arachis section species of the genus Arachis
Autor(a) principal: | |
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Data de Publicação: | 2006 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Genetics and Molecular Biology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000300021 |
Resumo: | The Arachis section is the most important of the nine sections of the genus Arachis because it includes the cultivated peanut, Arachis hypogaea. The genetic improvement of A. hypogaea using wild relatives is at an early stage of development in spite of their potential as sources of genes, including those for disease and pests resistance, that are not found in the A. hypogaea primary gene pool. Section Arachis species germplasm has been collected and maintained in gene banks and its use and effective conservation depends on our knowledge of the genetic variability contained in this material. Microsatellites are routinely used for the analysis of genetic variability because they are highly polymorphic and codominant. The objective of this study was to evaluate the transferability of microsatellite primers and the assay of genetic variability between and within the germplasm of some species of the Arachis section. Fourteen microsatellite loci developed for three different species of Arachis were analyzed and 11 (78%) were found to be polymorphic. All loci had transferability to all the species analyzed. The polymorphic loci were very informative, with expected heterozygosity per locus ranging from 0.70 to 0.94. In general, the germplasm analyzed showed wide genetic variation. |
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Genetics and Molecular Biology |
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Transferability and use of microsatellite markers for the genetic analysis of the germplasm of some Arachis section species of the genus Arachisgenetic diversitygermplasmpeanuttransferabilitywild speciesThe Arachis section is the most important of the nine sections of the genus Arachis because it includes the cultivated peanut, Arachis hypogaea. The genetic improvement of A. hypogaea using wild relatives is at an early stage of development in spite of their potential as sources of genes, including those for disease and pests resistance, that are not found in the A. hypogaea primary gene pool. Section Arachis species germplasm has been collected and maintained in gene banks and its use and effective conservation depends on our knowledge of the genetic variability contained in this material. Microsatellites are routinely used for the analysis of genetic variability because they are highly polymorphic and codominant. The objective of this study was to evaluate the transferability of microsatellite primers and the assay of genetic variability between and within the germplasm of some species of the Arachis section. Fourteen microsatellite loci developed for three different species of Arachis were analyzed and 11 (78%) were found to be polymorphic. All loci had transferability to all the species analyzed. The polymorphic loci were very informative, with expected heterozygosity per locus ranging from 0.70 to 0.94. In general, the germplasm analyzed showed wide genetic variation.Sociedade Brasileira de Genética2006-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000300021Genetics and Molecular Biology v.29 n.3 2006reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572006000300021info:eu-repo/semantics/openAccessBravo,Juliana PereiraHoshino,Andrea AkemiAngelici,Carla Maria Lara C.D.Lopes,Catalina RomeroGimenes,Marcos Aparecidoeng2006-09-01T00:00:00Zoai:scielo:S1415-47572006000300021Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2006-09-01T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false |
dc.title.none.fl_str_mv |
Transferability and use of microsatellite markers for the genetic analysis of the germplasm of some Arachis section species of the genus Arachis |
title |
Transferability and use of microsatellite markers for the genetic analysis of the germplasm of some Arachis section species of the genus Arachis |
spellingShingle |
Transferability and use of microsatellite markers for the genetic analysis of the germplasm of some Arachis section species of the genus Arachis Bravo,Juliana Pereira genetic diversity germplasm peanut transferability wild species |
title_short |
Transferability and use of microsatellite markers for the genetic analysis of the germplasm of some Arachis section species of the genus Arachis |
title_full |
Transferability and use of microsatellite markers for the genetic analysis of the germplasm of some Arachis section species of the genus Arachis |
title_fullStr |
Transferability and use of microsatellite markers for the genetic analysis of the germplasm of some Arachis section species of the genus Arachis |
title_full_unstemmed |
Transferability and use of microsatellite markers for the genetic analysis of the germplasm of some Arachis section species of the genus Arachis |
title_sort |
Transferability and use of microsatellite markers for the genetic analysis of the germplasm of some Arachis section species of the genus Arachis |
author |
Bravo,Juliana Pereira |
author_facet |
Bravo,Juliana Pereira Hoshino,Andrea Akemi Angelici,Carla Maria Lara C.D. Lopes,Catalina Romero Gimenes,Marcos Aparecido |
author_role |
author |
author2 |
Hoshino,Andrea Akemi Angelici,Carla Maria Lara C.D. Lopes,Catalina Romero Gimenes,Marcos Aparecido |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Bravo,Juliana Pereira Hoshino,Andrea Akemi Angelici,Carla Maria Lara C.D. Lopes,Catalina Romero Gimenes,Marcos Aparecido |
dc.subject.por.fl_str_mv |
genetic diversity germplasm peanut transferability wild species |
topic |
genetic diversity germplasm peanut transferability wild species |
description |
The Arachis section is the most important of the nine sections of the genus Arachis because it includes the cultivated peanut, Arachis hypogaea. The genetic improvement of A. hypogaea using wild relatives is at an early stage of development in spite of their potential as sources of genes, including those for disease and pests resistance, that are not found in the A. hypogaea primary gene pool. Section Arachis species germplasm has been collected and maintained in gene banks and its use and effective conservation depends on our knowledge of the genetic variability contained in this material. Microsatellites are routinely used for the analysis of genetic variability because they are highly polymorphic and codominant. The objective of this study was to evaluate the transferability of microsatellite primers and the assay of genetic variability between and within the germplasm of some species of the Arachis section. Fourteen microsatellite loci developed for three different species of Arachis were analyzed and 11 (78%) were found to be polymorphic. All loci had transferability to all the species analyzed. The polymorphic loci were very informative, with expected heterozygosity per locus ranging from 0.70 to 0.94. In general, the germplasm analyzed showed wide genetic variation. |
publishDate |
2006 |
dc.date.none.fl_str_mv |
2006-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000300021 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000300021 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S1415-47572006000300021 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
Genetics and Molecular Biology v.29 n.3 2006 reponame:Genetics and Molecular Biology instname:Sociedade Brasileira de Genética (SBG) instacron:SBG |
instname_str |
Sociedade Brasileira de Genética (SBG) |
instacron_str |
SBG |
institution |
SBG |
reponame_str |
Genetics and Molecular Biology |
collection |
Genetics and Molecular Biology |
repository.name.fl_str_mv |
Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG) |
repository.mail.fl_str_mv |
||editor@gmb.org.br |
_version_ |
1752122380216434688 |