Heterologous microsatellite primer pairs informative for the whole genus Arachis

Detalhes bibliográficos
Autor(a) principal: Hoshino,Andrea Akemi
Data de Publicação: 2006
Outros Autores: Bravo,Juliana Pereira, Angelici,Carla M.L.C.D., Barbosa,Andréa V. Gobbi, Lopes,Catalina Romero, Gimenes,Marcos A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000400016
Resumo: The genus Arachis currently comprises 69 described species, some of which have potential and real value as human and animal foods. These Arachis species have been collected and maintained in germplasm banks to provide material that can be used as sources of genes in breeding programs and for the selection of new cultivars. One of the principal objectives of germplasm conservation is the evaluation of genetic variability, which is best conducted using molecular markers. We investigated the use of heterologous primers to amplify microsatellite loci that could be used to evaluate genetic variability in Arachis germplasm. Fifteen microsatellite primer pairs were tested in 76 accessions of 34 species from the nine Arachis sections. The data indicated that heterologous primers were very useful in Arachis since they had high transferability among the species (91%) and allowed the amplification of very polymorphic putative loci, which allowed both the characterization of most accessions and to make inferences about the mating systems of some species analyzed. Our data also revealed that the germplasm analyzed showed high variability, even when represented by few accessions.
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spelling Heterologous microsatellite primer pairs informative for the whole genus Arachispeanutgenetic relationshipmolecular markerswild relativesThe genus Arachis currently comprises 69 described species, some of which have potential and real value as human and animal foods. These Arachis species have been collected and maintained in germplasm banks to provide material that can be used as sources of genes in breeding programs and for the selection of new cultivars. One of the principal objectives of germplasm conservation is the evaluation of genetic variability, which is best conducted using molecular markers. We investigated the use of heterologous primers to amplify microsatellite loci that could be used to evaluate genetic variability in Arachis germplasm. Fifteen microsatellite primer pairs were tested in 76 accessions of 34 species from the nine Arachis sections. The data indicated that heterologous primers were very useful in Arachis since they had high transferability among the species (91%) and allowed the amplification of very polymorphic putative loci, which allowed both the characterization of most accessions and to make inferences about the mating systems of some species analyzed. Our data also revealed that the germplasm analyzed showed high variability, even when represented by few accessions.Sociedade Brasileira de Genética2006-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000400016Genetics and Molecular Biology v.29 n.4 2006reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572006000400016info:eu-repo/semantics/openAccessHoshino,Andrea AkemiBravo,Juliana PereiraAngelici,Carla M.L.C.D.Barbosa,Andréa V. GobbiLopes,Catalina RomeroGimenes,Marcos A.eng2006-11-21T00:00:00Zoai:scielo:S1415-47572006000400016Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2006-11-21T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Heterologous microsatellite primer pairs informative for the whole genus Arachis
title Heterologous microsatellite primer pairs informative for the whole genus Arachis
spellingShingle Heterologous microsatellite primer pairs informative for the whole genus Arachis
Hoshino,Andrea Akemi
peanut
genetic relationship
molecular markers
wild relatives
title_short Heterologous microsatellite primer pairs informative for the whole genus Arachis
title_full Heterologous microsatellite primer pairs informative for the whole genus Arachis
title_fullStr Heterologous microsatellite primer pairs informative for the whole genus Arachis
title_full_unstemmed Heterologous microsatellite primer pairs informative for the whole genus Arachis
title_sort Heterologous microsatellite primer pairs informative for the whole genus Arachis
author Hoshino,Andrea Akemi
author_facet Hoshino,Andrea Akemi
Bravo,Juliana Pereira
Angelici,Carla M.L.C.D.
Barbosa,Andréa V. Gobbi
Lopes,Catalina Romero
Gimenes,Marcos A.
author_role author
author2 Bravo,Juliana Pereira
Angelici,Carla M.L.C.D.
Barbosa,Andréa V. Gobbi
Lopes,Catalina Romero
Gimenes,Marcos A.
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Hoshino,Andrea Akemi
Bravo,Juliana Pereira
Angelici,Carla M.L.C.D.
Barbosa,Andréa V. Gobbi
Lopes,Catalina Romero
Gimenes,Marcos A.
dc.subject.por.fl_str_mv peanut
genetic relationship
molecular markers
wild relatives
topic peanut
genetic relationship
molecular markers
wild relatives
description The genus Arachis currently comprises 69 described species, some of which have potential and real value as human and animal foods. These Arachis species have been collected and maintained in germplasm banks to provide material that can be used as sources of genes in breeding programs and for the selection of new cultivars. One of the principal objectives of germplasm conservation is the evaluation of genetic variability, which is best conducted using molecular markers. We investigated the use of heterologous primers to amplify microsatellite loci that could be used to evaluate genetic variability in Arachis germplasm. Fifteen microsatellite primer pairs were tested in 76 accessions of 34 species from the nine Arachis sections. The data indicated that heterologous primers were very useful in Arachis since they had high transferability among the species (91%) and allowed the amplification of very polymorphic putative loci, which allowed both the characterization of most accessions and to make inferences about the mating systems of some species analyzed. Our data also revealed that the germplasm analyzed showed high variability, even when represented by few accessions.
publishDate 2006
dc.date.none.fl_str_mv 2006-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000400016
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000400016
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1415-47572006000400016
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.29 n.4 2006
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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