Heterologous microsatellite primer pairs informative for the whole genus Arachis
Autor(a) principal: | |
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Data de Publicação: | 2006 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Genetics and Molecular Biology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000400016 |
Resumo: | The genus Arachis currently comprises 69 described species, some of which have potential and real value as human and animal foods. These Arachis species have been collected and maintained in germplasm banks to provide material that can be used as sources of genes in breeding programs and for the selection of new cultivars. One of the principal objectives of germplasm conservation is the evaluation of genetic variability, which is best conducted using molecular markers. We investigated the use of heterologous primers to amplify microsatellite loci that could be used to evaluate genetic variability in Arachis germplasm. Fifteen microsatellite primer pairs were tested in 76 accessions of 34 species from the nine Arachis sections. The data indicated that heterologous primers were very useful in Arachis since they had high transferability among the species (91%) and allowed the amplification of very polymorphic putative loci, which allowed both the characterization of most accessions and to make inferences about the mating systems of some species analyzed. Our data also revealed that the germplasm analyzed showed high variability, even when represented by few accessions. |
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Genetics and Molecular Biology |
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Heterologous microsatellite primer pairs informative for the whole genus Arachispeanutgenetic relationshipmolecular markerswild relativesThe genus Arachis currently comprises 69 described species, some of which have potential and real value as human and animal foods. These Arachis species have been collected and maintained in germplasm banks to provide material that can be used as sources of genes in breeding programs and for the selection of new cultivars. One of the principal objectives of germplasm conservation is the evaluation of genetic variability, which is best conducted using molecular markers. We investigated the use of heterologous primers to amplify microsatellite loci that could be used to evaluate genetic variability in Arachis germplasm. Fifteen microsatellite primer pairs were tested in 76 accessions of 34 species from the nine Arachis sections. The data indicated that heterologous primers were very useful in Arachis since they had high transferability among the species (91%) and allowed the amplification of very polymorphic putative loci, which allowed both the characterization of most accessions and to make inferences about the mating systems of some species analyzed. Our data also revealed that the germplasm analyzed showed high variability, even when represented by few accessions.Sociedade Brasileira de Genética2006-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000400016Genetics and Molecular Biology v.29 n.4 2006reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572006000400016info:eu-repo/semantics/openAccessHoshino,Andrea AkemiBravo,Juliana PereiraAngelici,Carla M.L.C.D.Barbosa,Andréa V. GobbiLopes,Catalina RomeroGimenes,Marcos A.eng2006-11-21T00:00:00Zoai:scielo:S1415-47572006000400016Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2006-11-21T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false |
dc.title.none.fl_str_mv |
Heterologous microsatellite primer pairs informative for the whole genus Arachis |
title |
Heterologous microsatellite primer pairs informative for the whole genus Arachis |
spellingShingle |
Heterologous microsatellite primer pairs informative for the whole genus Arachis Hoshino,Andrea Akemi peanut genetic relationship molecular markers wild relatives |
title_short |
Heterologous microsatellite primer pairs informative for the whole genus Arachis |
title_full |
Heterologous microsatellite primer pairs informative for the whole genus Arachis |
title_fullStr |
Heterologous microsatellite primer pairs informative for the whole genus Arachis |
title_full_unstemmed |
Heterologous microsatellite primer pairs informative for the whole genus Arachis |
title_sort |
Heterologous microsatellite primer pairs informative for the whole genus Arachis |
author |
Hoshino,Andrea Akemi |
author_facet |
Hoshino,Andrea Akemi Bravo,Juliana Pereira Angelici,Carla M.L.C.D. Barbosa,Andréa V. Gobbi Lopes,Catalina Romero Gimenes,Marcos A. |
author_role |
author |
author2 |
Bravo,Juliana Pereira Angelici,Carla M.L.C.D. Barbosa,Andréa V. Gobbi Lopes,Catalina Romero Gimenes,Marcos A. |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Hoshino,Andrea Akemi Bravo,Juliana Pereira Angelici,Carla M.L.C.D. Barbosa,Andréa V. Gobbi Lopes,Catalina Romero Gimenes,Marcos A. |
dc.subject.por.fl_str_mv |
peanut genetic relationship molecular markers wild relatives |
topic |
peanut genetic relationship molecular markers wild relatives |
description |
The genus Arachis currently comprises 69 described species, some of which have potential and real value as human and animal foods. These Arachis species have been collected and maintained in germplasm banks to provide material that can be used as sources of genes in breeding programs and for the selection of new cultivars. One of the principal objectives of germplasm conservation is the evaluation of genetic variability, which is best conducted using molecular markers. We investigated the use of heterologous primers to amplify microsatellite loci that could be used to evaluate genetic variability in Arachis germplasm. Fifteen microsatellite primer pairs were tested in 76 accessions of 34 species from the nine Arachis sections. The data indicated that heterologous primers were very useful in Arachis since they had high transferability among the species (91%) and allowed the amplification of very polymorphic putative loci, which allowed both the characterization of most accessions and to make inferences about the mating systems of some species analyzed. Our data also revealed that the germplasm analyzed showed high variability, even when represented by few accessions. |
publishDate |
2006 |
dc.date.none.fl_str_mv |
2006-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000400016 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572006000400016 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S1415-47572006000400016 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
Genetics and Molecular Biology v.29 n.4 2006 reponame:Genetics and Molecular Biology instname:Sociedade Brasileira de Genética (SBG) instacron:SBG |
instname_str |
Sociedade Brasileira de Genética (SBG) |
instacron_str |
SBG |
institution |
SBG |
reponame_str |
Genetics and Molecular Biology |
collection |
Genetics and Molecular Biology |
repository.name.fl_str_mv |
Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG) |
repository.mail.fl_str_mv |
||editor@gmb.org.br |
_version_ |
1752122380257329152 |