Structural and regulatory differences in amylase isoenzymes in germinating Brazilian barley cultivars

Detalhes bibliográficos
Autor(a) principal: Georg-Kraemer,J.E.
Data de Publicação: 2003
Outros Autores: Cavalli,S.S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572003000100012
Resumo: The amylase electrophoretic patterns of 10 Brazilian brewing-barley varieties with different malting grades and diastatic power were analyzed during the 7-day germination which occurs during the malting process. Intra and inter-variety genetic variability was observed at both the structural and regulatory level. In the first few days after germination all varieties showed a few active loci, all of them with low activity. In subsequent days, new loci became active and those already detected since early germination showed increased activity. All varieties showed a continuous increase in amylase synthesis until the 3rd and/or 4th day after germination. Some varieties maintained high amylase activity until the last day of germination, while others showed a decrease in activity on the 5th or 6th day. No specific band increased or decreased its intensity independently of the others. A total of 14 loci were detected, out of which only one locus was polymorphic, indicating very low structural genetic variability, with only 2.8% polymorphic loci, an average of 1.04 alleles per loci, and an average expected heterozygosity of only 0.7%. The mean intra-variety Jaccard similarity coefficient complement (1 - S J) was 0.009. The mean intra-variety difference based on regulatory differences was higher (1 - S J = 0.17) than that obtained based on structural differences, suggesting differential gene activation. Inter-variety differentiation also showed low structural variability, with 1 - S J = 0.026 and a Nei genetic distance (D) value of 0.0076, and a remarkable increase in divergence caused by differential gene activation (1 - S J = 0.34). These results indicate that regulatory polymorphism is the principal agent responsible for amylase variability in the barley varieties analyzed.
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spelling Structural and regulatory differences in amylase isoenzymes in germinating Brazilian barley cultivarsbarleyamylasesisoenzymesstructuralregulatory genetic differencesThe amylase electrophoretic patterns of 10 Brazilian brewing-barley varieties with different malting grades and diastatic power were analyzed during the 7-day germination which occurs during the malting process. Intra and inter-variety genetic variability was observed at both the structural and regulatory level. In the first few days after germination all varieties showed a few active loci, all of them with low activity. In subsequent days, new loci became active and those already detected since early germination showed increased activity. All varieties showed a continuous increase in amylase synthesis until the 3rd and/or 4th day after germination. Some varieties maintained high amylase activity until the last day of germination, while others showed a decrease in activity on the 5th or 6th day. No specific band increased or decreased its intensity independently of the others. A total of 14 loci were detected, out of which only one locus was polymorphic, indicating very low structural genetic variability, with only 2.8% polymorphic loci, an average of 1.04 alleles per loci, and an average expected heterozygosity of only 0.7%. The mean intra-variety Jaccard similarity coefficient complement (1 - S J) was 0.009. The mean intra-variety difference based on regulatory differences was higher (1 - S J = 0.17) than that obtained based on structural differences, suggesting differential gene activation. Inter-variety differentiation also showed low structural variability, with 1 - S J = 0.026 and a Nei genetic distance (D) value of 0.0076, and a remarkable increase in divergence caused by differential gene activation (1 - S J = 0.34). These results indicate that regulatory polymorphism is the principal agent responsible for amylase variability in the barley varieties analyzed.Sociedade Brasileira de Genética2003-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572003000100012Genetics and Molecular Biology v.26 n.1 2003reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572003000100012info:eu-repo/semantics/openAccessGeorg-Kraemer,J.E.Cavalli,S.S.eng2003-09-05T00:00:00Zoai:scielo:S1415-47572003000100012Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2003-09-05T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Structural and regulatory differences in amylase isoenzymes in germinating Brazilian barley cultivars
title Structural and regulatory differences in amylase isoenzymes in germinating Brazilian barley cultivars
spellingShingle Structural and regulatory differences in amylase isoenzymes in germinating Brazilian barley cultivars
Georg-Kraemer,J.E.
barley
amylases
isoenzymes
structural
regulatory genetic differences
title_short Structural and regulatory differences in amylase isoenzymes in germinating Brazilian barley cultivars
title_full Structural and regulatory differences in amylase isoenzymes in germinating Brazilian barley cultivars
title_fullStr Structural and regulatory differences in amylase isoenzymes in germinating Brazilian barley cultivars
title_full_unstemmed Structural and regulatory differences in amylase isoenzymes in germinating Brazilian barley cultivars
title_sort Structural and regulatory differences in amylase isoenzymes in germinating Brazilian barley cultivars
author Georg-Kraemer,J.E.
author_facet Georg-Kraemer,J.E.
Cavalli,S.S.
author_role author
author2 Cavalli,S.S.
author2_role author
dc.contributor.author.fl_str_mv Georg-Kraemer,J.E.
Cavalli,S.S.
dc.subject.por.fl_str_mv barley
amylases
isoenzymes
structural
regulatory genetic differences
topic barley
amylases
isoenzymes
structural
regulatory genetic differences
description The amylase electrophoretic patterns of 10 Brazilian brewing-barley varieties with different malting grades and diastatic power were analyzed during the 7-day germination which occurs during the malting process. Intra and inter-variety genetic variability was observed at both the structural and regulatory level. In the first few days after germination all varieties showed a few active loci, all of them with low activity. In subsequent days, new loci became active and those already detected since early germination showed increased activity. All varieties showed a continuous increase in amylase synthesis until the 3rd and/or 4th day after germination. Some varieties maintained high amylase activity until the last day of germination, while others showed a decrease in activity on the 5th or 6th day. No specific band increased or decreased its intensity independently of the others. A total of 14 loci were detected, out of which only one locus was polymorphic, indicating very low structural genetic variability, with only 2.8% polymorphic loci, an average of 1.04 alleles per loci, and an average expected heterozygosity of only 0.7%. The mean intra-variety Jaccard similarity coefficient complement (1 - S J) was 0.009. The mean intra-variety difference based on regulatory differences was higher (1 - S J = 0.17) than that obtained based on structural differences, suggesting differential gene activation. Inter-variety differentiation also showed low structural variability, with 1 - S J = 0.026 and a Nei genetic distance (D) value of 0.0076, and a remarkable increase in divergence caused by differential gene activation (1 - S J = 0.34). These results indicate that regulatory polymorphism is the principal agent responsible for amylase variability in the barley varieties analyzed.
publishDate 2003
dc.date.none.fl_str_mv 2003-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572003000100012
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572003000100012
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1415-47572003000100012
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.26 n.1 2003
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
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institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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