A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population

Detalhes bibliográficos
Autor(a) principal: Brincas,Heloisa Magagnin
Data de Publicação: 2019
Outros Autores: Augusto,Danillo G., Mathias,Carolina, Cavalli,Iglenir João, Lima,Rubens Silveira de, Kuroda,Flávia, Urban,Cícero de Andrade, Gradia,Daniela Fiori, de Oliveira,Jaqueline, de Almeida,Rodrigo Coutinho, Ribeiro,Enilze Maria de Souza Fonseca
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500103
Resumo: Abstract MicroRNAs (miRNAs) play an essential role in gene expression and affect the development of tumours, including breast cancer (BC). Polymorphisms in miRNA genes can affect the interaction of miRNAs with their target messenger RNA by interfering, creating or disrupting target sites. The single nucleotide polymorphism (SNP) rs2910164, located in the seed region of miR146a, was shown to be associated with BC among different populations. In the present study, we investigated whether rs2910164 is associated with BC in 326 patients and 411 controls from a Brazilian population of predominantly European ancestry. The presence of the allele rs2910164*C was associated with an increased risk of BC (OR=1.4, 95% CI=1.03-1.85, p = 0.03). We also analysed publicly available RNA-seq data to evaluate if miR146a is differentially expressed in different subtypes of BC. Genotyping was performed by polymerase chain reaction with sequence-specific primers (PCR-SSP). By leveraging public data from TCGA database, we analysed 461 patients and found that miR146a is significantly more expressed in BC than in non-tumor tissue (1.47 fold, p = 0.02) and is expressed to a greater degree in aggressive BC subtypes.
id SBG-1_4cdd6b2ed04de1f9e93dd3cc2b7e6920
oai_identifier_str oai:scielo:S1415-47572019000500103
network_acronym_str SBG-1
network_name_str Genetics and Molecular Biology
repository_id_str
spelling A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian PopulationmiRNA polymorphismmiR146ars2910164Breast cancerCase-control studyAbstract MicroRNAs (miRNAs) play an essential role in gene expression and affect the development of tumours, including breast cancer (BC). Polymorphisms in miRNA genes can affect the interaction of miRNAs with their target messenger RNA by interfering, creating or disrupting target sites. The single nucleotide polymorphism (SNP) rs2910164, located in the seed region of miR146a, was shown to be associated with BC among different populations. In the present study, we investigated whether rs2910164 is associated with BC in 326 patients and 411 controls from a Brazilian population of predominantly European ancestry. The presence of the allele rs2910164*C was associated with an increased risk of BC (OR=1.4, 95% CI=1.03-1.85, p = 0.03). We also analysed publicly available RNA-seq data to evaluate if miR146a is differentially expressed in different subtypes of BC. Genotyping was performed by polymerase chain reaction with sequence-specific primers (PCR-SSP). By leveraging public data from TCGA database, we analysed 461 patients and found that miR146a is significantly more expressed in BC than in non-tumor tissue (1.47 fold, p = 0.02) and is expressed to a greater degree in aggressive BC subtypes.Sociedade Brasileira de Genética2019-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500103Genetics and Molecular Biology v.42 n.4 2019reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-gmb-2019-0278info:eu-repo/semantics/openAccessBrincas,Heloisa MagagninAugusto,Danillo G.Mathias,CarolinaCavalli,Iglenir JoãoLima,Rubens Silveira deKuroda,FláviaUrban,Cícero de AndradeGradia,Daniela Fioride Oliveira,Jaquelinede Almeida,Rodrigo CoutinhoRibeiro,Enilze Maria de Souza Fonsecaeng2020-02-14T00:00:00Zoai:scielo:S1415-47572019000500103Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2020-02-14T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population
title A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population
spellingShingle A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population
Brincas,Heloisa Magagnin
miRNA polymorphism
miR146a
rs2910164
Breast cancer
Case-control study
title_short A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population
title_full A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population
title_fullStr A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population
title_full_unstemmed A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population
title_sort A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population
author Brincas,Heloisa Magagnin
author_facet Brincas,Heloisa Magagnin
Augusto,Danillo G.
Mathias,Carolina
Cavalli,Iglenir João
Lima,Rubens Silveira de
Kuroda,Flávia
Urban,Cícero de Andrade
Gradia,Daniela Fiori
de Oliveira,Jaqueline
de Almeida,Rodrigo Coutinho
Ribeiro,Enilze Maria de Souza Fonseca
author_role author
author2 Augusto,Danillo G.
Mathias,Carolina
Cavalli,Iglenir João
Lima,Rubens Silveira de
Kuroda,Flávia
Urban,Cícero de Andrade
Gradia,Daniela Fiori
de Oliveira,Jaqueline
de Almeida,Rodrigo Coutinho
Ribeiro,Enilze Maria de Souza Fonseca
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Brincas,Heloisa Magagnin
Augusto,Danillo G.
Mathias,Carolina
Cavalli,Iglenir João
Lima,Rubens Silveira de
Kuroda,Flávia
Urban,Cícero de Andrade
Gradia,Daniela Fiori
de Oliveira,Jaqueline
de Almeida,Rodrigo Coutinho
Ribeiro,Enilze Maria de Souza Fonseca
dc.subject.por.fl_str_mv miRNA polymorphism
miR146a
rs2910164
Breast cancer
Case-control study
topic miRNA polymorphism
miR146a
rs2910164
Breast cancer
Case-control study
description Abstract MicroRNAs (miRNAs) play an essential role in gene expression and affect the development of tumours, including breast cancer (BC). Polymorphisms in miRNA genes can affect the interaction of miRNAs with their target messenger RNA by interfering, creating or disrupting target sites. The single nucleotide polymorphism (SNP) rs2910164, located in the seed region of miR146a, was shown to be associated with BC among different populations. In the present study, we investigated whether rs2910164 is associated with BC in 326 patients and 411 controls from a Brazilian population of predominantly European ancestry. The presence of the allele rs2910164*C was associated with an increased risk of BC (OR=1.4, 95% CI=1.03-1.85, p = 0.03). We also analysed publicly available RNA-seq data to evaluate if miR146a is differentially expressed in different subtypes of BC. Genotyping was performed by polymerase chain reaction with sequence-specific primers (PCR-SSP). By leveraging public data from TCGA database, we analysed 461 patients and found that miR146a is significantly more expressed in BC than in non-tumor tissue (1.47 fold, p = 0.02) and is expressed to a greater degree in aggressive BC subtypes.
publishDate 2019
dc.date.none.fl_str_mv 2019-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500103
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500103
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4685-gmb-2019-0278
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.42 n.4 2019
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
_version_ 1752122389263548416