A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Genetics and Molecular Biology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500103 |
Resumo: | Abstract MicroRNAs (miRNAs) play an essential role in gene expression and affect the development of tumours, including breast cancer (BC). Polymorphisms in miRNA genes can affect the interaction of miRNAs with their target messenger RNA by interfering, creating or disrupting target sites. The single nucleotide polymorphism (SNP) rs2910164, located in the seed region of miR146a, was shown to be associated with BC among different populations. In the present study, we investigated whether rs2910164 is associated with BC in 326 patients and 411 controls from a Brazilian population of predominantly European ancestry. The presence of the allele rs2910164*C was associated with an increased risk of BC (OR=1.4, 95% CI=1.03-1.85, p = 0.03). We also analysed publicly available RNA-seq data to evaluate if miR146a is differentially expressed in different subtypes of BC. Genotyping was performed by polymerase chain reaction with sequence-specific primers (PCR-SSP). By leveraging public data from TCGA database, we analysed 461 patients and found that miR146a is significantly more expressed in BC than in non-tumor tissue (1.47 fold, p = 0.02) and is expressed to a greater degree in aggressive BC subtypes. |
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Genetics and Molecular Biology |
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A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian PopulationmiRNA polymorphismmiR146ars2910164Breast cancerCase-control studyAbstract MicroRNAs (miRNAs) play an essential role in gene expression and affect the development of tumours, including breast cancer (BC). Polymorphisms in miRNA genes can affect the interaction of miRNAs with their target messenger RNA by interfering, creating or disrupting target sites. The single nucleotide polymorphism (SNP) rs2910164, located in the seed region of miR146a, was shown to be associated with BC among different populations. In the present study, we investigated whether rs2910164 is associated with BC in 326 patients and 411 controls from a Brazilian population of predominantly European ancestry. The presence of the allele rs2910164*C was associated with an increased risk of BC (OR=1.4, 95% CI=1.03-1.85, p = 0.03). We also analysed publicly available RNA-seq data to evaluate if miR146a is differentially expressed in different subtypes of BC. Genotyping was performed by polymerase chain reaction with sequence-specific primers (PCR-SSP). By leveraging public data from TCGA database, we analysed 461 patients and found that miR146a is significantly more expressed in BC than in non-tumor tissue (1.47 fold, p = 0.02) and is expressed to a greater degree in aggressive BC subtypes.Sociedade Brasileira de Genética2019-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500103Genetics and Molecular Biology v.42 n.4 2019reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-gmb-2019-0278info:eu-repo/semantics/openAccessBrincas,Heloisa MagagninAugusto,Danillo G.Mathias,CarolinaCavalli,Iglenir JoãoLima,Rubens Silveira deKuroda,FláviaUrban,Cícero de AndradeGradia,Daniela Fioride Oliveira,Jaquelinede Almeida,Rodrigo CoutinhoRibeiro,Enilze Maria de Souza Fonsecaeng2020-02-14T00:00:00Zoai:scielo:S1415-47572019000500103Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2020-02-14T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false |
dc.title.none.fl_str_mv |
A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population |
title |
A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population |
spellingShingle |
A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population Brincas,Heloisa Magagnin miRNA polymorphism miR146a rs2910164 Breast cancer Case-control study |
title_short |
A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population |
title_full |
A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population |
title_fullStr |
A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population |
title_full_unstemmed |
A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population |
title_sort |
A genetic variant in microRNA-146a is associated with sporadic breast cancer in a Southern Brazilian Population |
author |
Brincas,Heloisa Magagnin |
author_facet |
Brincas,Heloisa Magagnin Augusto,Danillo G. Mathias,Carolina Cavalli,Iglenir João Lima,Rubens Silveira de Kuroda,Flávia Urban,Cícero de Andrade Gradia,Daniela Fiori de Oliveira,Jaqueline de Almeida,Rodrigo Coutinho Ribeiro,Enilze Maria de Souza Fonseca |
author_role |
author |
author2 |
Augusto,Danillo G. Mathias,Carolina Cavalli,Iglenir João Lima,Rubens Silveira de Kuroda,Flávia Urban,Cícero de Andrade Gradia,Daniela Fiori de Oliveira,Jaqueline de Almeida,Rodrigo Coutinho Ribeiro,Enilze Maria de Souza Fonseca |
author2_role |
author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Brincas,Heloisa Magagnin Augusto,Danillo G. Mathias,Carolina Cavalli,Iglenir João Lima,Rubens Silveira de Kuroda,Flávia Urban,Cícero de Andrade Gradia,Daniela Fiori de Oliveira,Jaqueline de Almeida,Rodrigo Coutinho Ribeiro,Enilze Maria de Souza Fonseca |
dc.subject.por.fl_str_mv |
miRNA polymorphism miR146a rs2910164 Breast cancer Case-control study |
topic |
miRNA polymorphism miR146a rs2910164 Breast cancer Case-control study |
description |
Abstract MicroRNAs (miRNAs) play an essential role in gene expression and affect the development of tumours, including breast cancer (BC). Polymorphisms in miRNA genes can affect the interaction of miRNAs with their target messenger RNA by interfering, creating or disrupting target sites. The single nucleotide polymorphism (SNP) rs2910164, located in the seed region of miR146a, was shown to be associated with BC among different populations. In the present study, we investigated whether rs2910164 is associated with BC in 326 patients and 411 controls from a Brazilian population of predominantly European ancestry. The presence of the allele rs2910164*C was associated with an increased risk of BC (OR=1.4, 95% CI=1.03-1.85, p = 0.03). We also analysed publicly available RNA-seq data to evaluate if miR146a is differentially expressed in different subtypes of BC. Genotyping was performed by polymerase chain reaction with sequence-specific primers (PCR-SSP). By leveraging public data from TCGA database, we analysed 461 patients and found that miR146a is significantly more expressed in BC than in non-tumor tissue (1.47 fold, p = 0.02) and is expressed to a greater degree in aggressive BC subtypes. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500103 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500103 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1678-4685-gmb-2019-0278 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
Genetics and Molecular Biology v.42 n.4 2019 reponame:Genetics and Molecular Biology instname:Sociedade Brasileira de Genética (SBG) instacron:SBG |
instname_str |
Sociedade Brasileira de Genética (SBG) |
instacron_str |
SBG |
institution |
SBG |
reponame_str |
Genetics and Molecular Biology |
collection |
Genetics and Molecular Biology |
repository.name.fl_str_mv |
Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG) |
repository.mail.fl_str_mv |
||editor@gmb.org.br |
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1752122389263548416 |