Evaluation of methods for detection and identification of Mycobacterium species in patients suspected of having pulmonary tuberculosis

Detalhes bibliográficos
Autor(a) principal: Marchi,A. M.
Data de Publicação: 2008
Outros Autores: Juttel,I. D., Kawacubo,E. M., Dalmarco,E. M., Blatt,S. L., Cordova,C. M. M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Journal of Microbiology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822008000400003
Resumo: Tuberculosis control is a priority for the Ministry of Health policies in Brazil. In the present work, the detection of Mycobacterium tuberculosis by the Polymerase Chain Reaction (PCR) was standardized, and the laboratory diagnosis of pulmonary tuberculosis was evaluated comparing baciloscopy, culture and PCR tests. The study was carried out with 117 sputum samples from different patients suspected of having pulmonary tuberculosis, for whom physicians had ordered a baciloscopy test. Baciloscopy was performed using the Ziehl-Neelsen method, and culture was performed by incubation of treated samples in Lowenstein-Jensen's medium at 37ºC for eight weeks. For PCR, DNA was amplified with a specific pair of primers to the M. tuberculosis complex, with a resulting product of 123 bp from the insertion element IS6110. Three (2.56%) samples presented a positive baciloscopy result and a positive PCR result (100% agreement), and nine (7.69%) presented Mycobacterium sp. growth in culture (P= 0.1384). Among six samples with positive results in culture, one was identified by PCR-RFLP as belonging to the M. tuberculosis complex and one was identified as a non-tuberculosis mycobacteria. Sensitivity and specificity of PCR compared to culture were 33.3% and 100%, respectively.
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spelling Evaluation of methods for detection and identification of Mycobacterium species in patients suspected of having pulmonary tuberculosistuberculosisbaciloscopyculturePCRTuberculosis control is a priority for the Ministry of Health policies in Brazil. In the present work, the detection of Mycobacterium tuberculosis by the Polymerase Chain Reaction (PCR) was standardized, and the laboratory diagnosis of pulmonary tuberculosis was evaluated comparing baciloscopy, culture and PCR tests. The study was carried out with 117 sputum samples from different patients suspected of having pulmonary tuberculosis, for whom physicians had ordered a baciloscopy test. Baciloscopy was performed using the Ziehl-Neelsen method, and culture was performed by incubation of treated samples in Lowenstein-Jensen's medium at 37ºC for eight weeks. For PCR, DNA was amplified with a specific pair of primers to the M. tuberculosis complex, with a resulting product of 123 bp from the insertion element IS6110. Three (2.56%) samples presented a positive baciloscopy result and a positive PCR result (100% agreement), and nine (7.69%) presented Mycobacterium sp. growth in culture (P= 0.1384). Among six samples with positive results in culture, one was identified by PCR-RFLP as belonging to the M. tuberculosis complex and one was identified as a non-tuberculosis mycobacteria. Sensitivity and specificity of PCR compared to culture were 33.3% and 100%, respectively.Sociedade Brasileira de Microbiologia2008-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822008000400003Brazilian Journal of Microbiology v.39 n.4 2008reponame:Brazilian Journal of Microbiologyinstname:Sociedade Brasileira de Microbiologia (SBM)instacron:SBM10.1590/S1517-83822008000400003info:eu-repo/semantics/openAccessMarchi,A. M.Juttel,I. D.Kawacubo,E. M.Dalmarco,E. M.Blatt,S. L.Cordova,C. M. M.eng2009-04-06T00:00:00Zoai:scielo:S1517-83822008000400003Revistahttps://www.scielo.br/j/bjm/ONGhttps://old.scielo.br/oai/scielo-oai.phpbjm@sbmicrobiologia.org.br||mbmartin@usp.br1678-44051517-8382opendoar:2009-04-06T00:00Brazilian Journal of Microbiology - Sociedade Brasileira de Microbiologia (SBM)false
dc.title.none.fl_str_mv Evaluation of methods for detection and identification of Mycobacterium species in patients suspected of having pulmonary tuberculosis
title Evaluation of methods for detection and identification of Mycobacterium species in patients suspected of having pulmonary tuberculosis
spellingShingle Evaluation of methods for detection and identification of Mycobacterium species in patients suspected of having pulmonary tuberculosis
Marchi,A. M.
tuberculosis
baciloscopy
culture
PCR
title_short Evaluation of methods for detection and identification of Mycobacterium species in patients suspected of having pulmonary tuberculosis
title_full Evaluation of methods for detection and identification of Mycobacterium species in patients suspected of having pulmonary tuberculosis
title_fullStr Evaluation of methods for detection and identification of Mycobacterium species in patients suspected of having pulmonary tuberculosis
title_full_unstemmed Evaluation of methods for detection and identification of Mycobacterium species in patients suspected of having pulmonary tuberculosis
title_sort Evaluation of methods for detection and identification of Mycobacterium species in patients suspected of having pulmonary tuberculosis
author Marchi,A. M.
author_facet Marchi,A. M.
Juttel,I. D.
Kawacubo,E. M.
Dalmarco,E. M.
Blatt,S. L.
Cordova,C. M. M.
author_role author
author2 Juttel,I. D.
Kawacubo,E. M.
Dalmarco,E. M.
Blatt,S. L.
Cordova,C. M. M.
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Marchi,A. M.
Juttel,I. D.
Kawacubo,E. M.
Dalmarco,E. M.
Blatt,S. L.
Cordova,C. M. M.
dc.subject.por.fl_str_mv tuberculosis
baciloscopy
culture
PCR
topic tuberculosis
baciloscopy
culture
PCR
description Tuberculosis control is a priority for the Ministry of Health policies in Brazil. In the present work, the detection of Mycobacterium tuberculosis by the Polymerase Chain Reaction (PCR) was standardized, and the laboratory diagnosis of pulmonary tuberculosis was evaluated comparing baciloscopy, culture and PCR tests. The study was carried out with 117 sputum samples from different patients suspected of having pulmonary tuberculosis, for whom physicians had ordered a baciloscopy test. Baciloscopy was performed using the Ziehl-Neelsen method, and culture was performed by incubation of treated samples in Lowenstein-Jensen's medium at 37ºC for eight weeks. For PCR, DNA was amplified with a specific pair of primers to the M. tuberculosis complex, with a resulting product of 123 bp from the insertion element IS6110. Three (2.56%) samples presented a positive baciloscopy result and a positive PCR result (100% agreement), and nine (7.69%) presented Mycobacterium sp. growth in culture (P= 0.1384). Among six samples with positive results in culture, one was identified by PCR-RFLP as belonging to the M. tuberculosis complex and one was identified as a non-tuberculosis mycobacteria. Sensitivity and specificity of PCR compared to culture were 33.3% and 100%, respectively.
publishDate 2008
dc.date.none.fl_str_mv 2008-12-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822008000400003
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822008000400003
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1517-83822008000400003
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Microbiologia
publisher.none.fl_str_mv Sociedade Brasileira de Microbiologia
dc.source.none.fl_str_mv Brazilian Journal of Microbiology v.39 n.4 2008
reponame:Brazilian Journal of Microbiology
instname:Sociedade Brasileira de Microbiologia (SBM)
instacron:SBM
instname_str Sociedade Brasileira de Microbiologia (SBM)
instacron_str SBM
institution SBM
reponame_str Brazilian Journal of Microbiology
collection Brazilian Journal of Microbiology
repository.name.fl_str_mv Brazilian Journal of Microbiology - Sociedade Brasileira de Microbiologia (SBM)
repository.mail.fl_str_mv bjm@sbmicrobiologia.org.br||mbmartin@usp.br
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