Caracteriza????o taxon??mica de Occallatibacter savannae AB23 e avalia????o enzim??tica e pigmentos de acidobacteria: um enfoque biotecnol??gico

Detalhes bibliográficos
Autor(a) principal: Pinto, Ot??vio Henrique Bezerra
Data de Publicação: 2017
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UCB
Texto Completo: https://bdtd.ucb.br:8443/jspui/handle/tede/2271
Resumo: Acidobacteria is one of the most abundant phyla in soil; however, it is not yet known the reasons for their success in terrestrial habitats. This characteristic may be due to mechanisms of resistance as well as the large amount of glycosyl hydrolases and transferases present in Acidobacteria. Therefore, this study aimed to investigate mechanisms of resistance that may contribute to the abundance of Acidobacteria in soil. In addition, the degradation of cellulose was investigated, to understand its participation in processes of plant biomass degradation. In this study, a member of subdivision 1 of Acidobacteria, Occallatibacter savannae AB23 was used as model. This isolate was taxonomically characterized and cellulose degradation and carotenoid production were evaluated. The degradation of cellulose was evaluated using carboxymethylcellulose (CMC). The pigments were identified since this bacterium produced several carotenoids under different environmental stimuli. The results showed that the isolate AB23 can assimilate CMC, however in a very slow way, requiring 2 months for the visualization of colonies and 1 year to visualization of biomass in liquid medium. For this isolate, endoglucanases were found associated with the cell fraction of culture. In addition, cellobiose has been shown to be a repressor and lactose an inducer of endoglucanases expression. It was possible to observe the production of carotenoids in AB23. By mass spectrometry, it was possible to find ions related to carotenoids: ?? -carotene, neurosporene, lycopene, ??-carotene, ??-carotene, phytoene and phytofluene. These carotenoids might be used as a resistance mechanism since they are produced in response to stress caused by light. However, the presence of vitamins, oxygen and trace elements are essential for carotenoid production. The characteristics found in this work may be one of the mechanisms of persistence and / or resistance that confer abundance for Acidobacteria in soil.
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spelling Barreto, Cristine Chaveshttp://lattes.cnpq.br/9973148799581550Quirino, Bet??nia Ferrazhttp://lattes.cnpq.br/3916535995785654http://lattes.cnpq.br/5351634252210816Pinto, Ot??vio Henrique Bezerra2017-09-08T13:52:02Z2017-03-29PINTO, Ot??vio Henrique Bezerra. Caracteriza????o taxon??mica de Occallatibacter savannae AB23 e avalia????o enzim??tica e pigmentos de acidobacteria: um enfoque biotecnol??gico. 2017. 94 f. Disserta????o (Programa Stricto Sensu em Ci??ncias Gen??micas e Biotecnologia) - Universidade Cat??lica de Bras??lia, Bras??lia, 2017.https://bdtd.ucb.br:8443/jspui/handle/tede/2271Acidobacteria is one of the most abundant phyla in soil; however, it is not yet known the reasons for their success in terrestrial habitats. This characteristic may be due to mechanisms of resistance as well as the large amount of glycosyl hydrolases and transferases present in Acidobacteria. Therefore, this study aimed to investigate mechanisms of resistance that may contribute to the abundance of Acidobacteria in soil. In addition, the degradation of cellulose was investigated, to understand its participation in processes of plant biomass degradation. In this study, a member of subdivision 1 of Acidobacteria, Occallatibacter savannae AB23 was used as model. This isolate was taxonomically characterized and cellulose degradation and carotenoid production were evaluated. The degradation of cellulose was evaluated using carboxymethylcellulose (CMC). The pigments were identified since this bacterium produced several carotenoids under different environmental stimuli. The results showed that the isolate AB23 can assimilate CMC, however in a very slow way, requiring 2 months for the visualization of colonies and 1 year to visualization of biomass in liquid medium. For this isolate, endoglucanases were found associated with the cell fraction of culture. In addition, cellobiose has been shown to be a repressor and lactose an inducer of endoglucanases expression. It was possible to observe the production of carotenoids in AB23. By mass spectrometry, it was possible to find ions related to carotenoids: ?? -carotene, neurosporene, lycopene, ??-carotene, ??-carotene, phytoene and phytofluene. These carotenoids might be used as a resistance mechanism since they are produced in response to stress caused by light. However, the presence of vitamins, oxygen and trace elements are essential for carotenoid production. The characteristics found in this work may be one of the mechanisms of persistence and / or resistance that confer abundance for Acidobacteria in soil.Acidobacteria ?? um dos filos mais abundantes no solo, entretanto, n??o se conhece as raz??es que levam a essa abund??ncia. Estudos indicam que essa caracter??stica pode ser devido a mecanismos de resist??ncia e a grande quantidade de glicosil hidrolases e transferases presentes em Acidobacteria. Assim, esse estudo teve como objetivo investigar mecanismos de resist??ncia que podem contribuir para a abund??ncia de Acidobacteria no solo. Al??m disso, foi investigada a degrada????o de celulose em Acidobacteria, procurando entender sua participa????o em processos de degrada????o de material originado de plantas. Neste estudo foi utilizado como modelo Occallatibacter savannae AB23. Este isolado foi caracterizado taxonomicamente e foram avaliadas a degrada????o de celulose e produ????o de caroten??ides. A degrada????o de celulose foi avaliada utilizando-se carboximetilcelulose (CMC). Para os pigmentos, foram identificados quais carotenoides essa bact??ria produz e os est??mulos que levam a sua produ????o. Os resultados mostraram que o isolado AB23 consegue assimilar CMC, no entanto de uma forma muito lenta, sendo necess??rios 2 meses para a visualiza????o de col??nias. Para este isolado, as endoglucanasases foram encontradas associadas ?? fra????o celular da cultura. Al??m disso, celobiose mostrou ser um repressor e a lactose um indutor da express??o de endocglucanases. Foi poss??vel observar a produ????o de pigmentos em AB23. Por espectrometria de massa, foi poss??vel encontrar ??ons relacionados aos carotenoides: ??-caroteno, neurosporeno, licopeno, ??-caroteno, ??-caroteno, fitoeno e fitoflueno. Estes devem estar sendo empregados como um mecanismo de resist??ncia, uma vez que eles s??o produzidos em resposta ao estresse causado pela luz. No entanto a presen??a de vitaminas, oxig??nio e elementos tra??o s??o essenciais para produ????o desses pigmentos. As caracter??sticas encontradas neste trabalho podem ser um dos mecanismos de persist??ncia e/ou resist??ncia que conferem abund??ncia para Acidobacteria no solo.Submitted by Sara Ribeiro (sara.ribeiro@ucb.br) on 2017-09-08T13:51:47Z No. of bitstreams: 1 OtavioHenriqueB.PintoDissertacao2017.pdf: 3191289 bytes, checksum: b7b005d77190f465fe0685851ff5f090 (MD5)Approved for entry into archive by Sara Ribeiro (sara.ribeiro@ucb.br) on 2017-09-08T13:52:01Z (GMT) No. of bitstreams: 1 OtavioHenriqueB.PintoDissertacao2017.pdf: 3191289 bytes, checksum: b7b005d77190f465fe0685851ff5f090 (MD5)Made available in DSpace on 2017-09-08T13:52:02Z (GMT). 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dc.title.por.fl_str_mv Caracteriza????o taxon??mica de Occallatibacter savannae AB23 e avalia????o enzim??tica e pigmentos de acidobacteria: um enfoque biotecnol??gico
title Caracteriza????o taxon??mica de Occallatibacter savannae AB23 e avalia????o enzim??tica e pigmentos de acidobacteria: um enfoque biotecnol??gico
spellingShingle Caracteriza????o taxon??mica de Occallatibacter savannae AB23 e avalia????o enzim??tica e pigmentos de acidobacteria: um enfoque biotecnol??gico
Pinto, Ot??vio Henrique Bezerra
Carotenoides
Acidobacteria
Bact??rias do solo
Degrada????o de celulose
CNPQ::CIENCIAS BIOLOGICAS::GENETICA
title_short Caracteriza????o taxon??mica de Occallatibacter savannae AB23 e avalia????o enzim??tica e pigmentos de acidobacteria: um enfoque biotecnol??gico
title_full Caracteriza????o taxon??mica de Occallatibacter savannae AB23 e avalia????o enzim??tica e pigmentos de acidobacteria: um enfoque biotecnol??gico
title_fullStr Caracteriza????o taxon??mica de Occallatibacter savannae AB23 e avalia????o enzim??tica e pigmentos de acidobacteria: um enfoque biotecnol??gico
title_full_unstemmed Caracteriza????o taxon??mica de Occallatibacter savannae AB23 e avalia????o enzim??tica e pigmentos de acidobacteria: um enfoque biotecnol??gico
title_sort Caracteriza????o taxon??mica de Occallatibacter savannae AB23 e avalia????o enzim??tica e pigmentos de acidobacteria: um enfoque biotecnol??gico
author Pinto, Ot??vio Henrique Bezerra
author_facet Pinto, Ot??vio Henrique Bezerra
author_role author
dc.contributor.advisor1.fl_str_mv Barreto, Cristine Chaves
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/9973148799581550
dc.contributor.advisor-co1.fl_str_mv Quirino, Bet??nia Ferraz
dc.contributor.advisor-co1Lattes.fl_str_mv http://lattes.cnpq.br/3916535995785654
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/5351634252210816
dc.contributor.author.fl_str_mv Pinto, Ot??vio Henrique Bezerra
contributor_str_mv Barreto, Cristine Chaves
Quirino, Bet??nia Ferraz
dc.subject.por.fl_str_mv Carotenoides
Acidobacteria
Bact??rias do solo
Degrada????o de celulose
topic Carotenoides
Acidobacteria
Bact??rias do solo
Degrada????o de celulose
CNPQ::CIENCIAS BIOLOGICAS::GENETICA
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS::GENETICA
dc.description.abstract.eng.fl_txt_mv Acidobacteria is one of the most abundant phyla in soil; however, it is not yet known the reasons for their success in terrestrial habitats. This characteristic may be due to mechanisms of resistance as well as the large amount of glycosyl hydrolases and transferases present in Acidobacteria. Therefore, this study aimed to investigate mechanisms of resistance that may contribute to the abundance of Acidobacteria in soil. In addition, the degradation of cellulose was investigated, to understand its participation in processes of plant biomass degradation. In this study, a member of subdivision 1 of Acidobacteria, Occallatibacter savannae AB23 was used as model. This isolate was taxonomically characterized and cellulose degradation and carotenoid production were evaluated. The degradation of cellulose was evaluated using carboxymethylcellulose (CMC). The pigments were identified since this bacterium produced several carotenoids under different environmental stimuli. The results showed that the isolate AB23 can assimilate CMC, however in a very slow way, requiring 2 months for the visualization of colonies and 1 year to visualization of biomass in liquid medium. For this isolate, endoglucanases were found associated with the cell fraction of culture. In addition, cellobiose has been shown to be a repressor and lactose an inducer of endoglucanases expression. It was possible to observe the production of carotenoids in AB23. By mass spectrometry, it was possible to find ions related to carotenoids: ?? -carotene, neurosporene, lycopene, ??-carotene, ??-carotene, phytoene and phytofluene. These carotenoids might be used as a resistance mechanism since they are produced in response to stress caused by light. However, the presence of vitamins, oxygen and trace elements are essential for carotenoid production. The characteristics found in this work may be one of the mechanisms of persistence and / or resistance that confer abundance for Acidobacteria in soil.
dc.description.abstract.por.fl_txt_mv Acidobacteria ?? um dos filos mais abundantes no solo, entretanto, n??o se conhece as raz??es que levam a essa abund??ncia. Estudos indicam que essa caracter??stica pode ser devido a mecanismos de resist??ncia e a grande quantidade de glicosil hidrolases e transferases presentes em Acidobacteria. Assim, esse estudo teve como objetivo investigar mecanismos de resist??ncia que podem contribuir para a abund??ncia de Acidobacteria no solo. Al??m disso, foi investigada a degrada????o de celulose em Acidobacteria, procurando entender sua participa????o em processos de degrada????o de material originado de plantas. Neste estudo foi utilizado como modelo Occallatibacter savannae AB23. Este isolado foi caracterizado taxonomicamente e foram avaliadas a degrada????o de celulose e produ????o de caroten??ides. A degrada????o de celulose foi avaliada utilizando-se carboximetilcelulose (CMC). Para os pigmentos, foram identificados quais carotenoides essa bact??ria produz e os est??mulos que levam a sua produ????o. Os resultados mostraram que o isolado AB23 consegue assimilar CMC, no entanto de uma forma muito lenta, sendo necess??rios 2 meses para a visualiza????o de col??nias. Para este isolado, as endoglucanasases foram encontradas associadas ?? fra????o celular da cultura. Al??m disso, celobiose mostrou ser um repressor e a lactose um indutor da express??o de endocglucanases. Foi poss??vel observar a produ????o de pigmentos em AB23. Por espectrometria de massa, foi poss??vel encontrar ??ons relacionados aos carotenoides: ??-caroteno, neurosporeno, licopeno, ??-caroteno, ??-caroteno, fitoeno e fitoflueno. Estes devem estar sendo empregados como um mecanismo de resist??ncia, uma vez que eles s??o produzidos em resposta ao estresse causado pela luz. No entanto a presen??a de vitaminas, oxig??nio e elementos tra??o s??o essenciais para produ????o desses pigmentos. As caracter??sticas encontradas neste trabalho podem ser um dos mecanismos de persist??ncia e/ou resist??ncia que conferem abund??ncia para Acidobacteria no solo.
description Acidobacteria is one of the most abundant phyla in soil; however, it is not yet known the reasons for their success in terrestrial habitats. This characteristic may be due to mechanisms of resistance as well as the large amount of glycosyl hydrolases and transferases present in Acidobacteria. Therefore, this study aimed to investigate mechanisms of resistance that may contribute to the abundance of Acidobacteria in soil. In addition, the degradation of cellulose was investigated, to understand its participation in processes of plant biomass degradation. In this study, a member of subdivision 1 of Acidobacteria, Occallatibacter savannae AB23 was used as model. This isolate was taxonomically characterized and cellulose degradation and carotenoid production were evaluated. The degradation of cellulose was evaluated using carboxymethylcellulose (CMC). The pigments were identified since this bacterium produced several carotenoids under different environmental stimuli. The results showed that the isolate AB23 can assimilate CMC, however in a very slow way, requiring 2 months for the visualization of colonies and 1 year to visualization of biomass in liquid medium. For this isolate, endoglucanases were found associated with the cell fraction of culture. In addition, cellobiose has been shown to be a repressor and lactose an inducer of endoglucanases expression. It was possible to observe the production of carotenoids in AB23. By mass spectrometry, it was possible to find ions related to carotenoids: ?? -carotene, neurosporene, lycopene, ??-carotene, ??-carotene, phytoene and phytofluene. These carotenoids might be used as a resistance mechanism since they are produced in response to stress caused by light. However, the presence of vitamins, oxygen and trace elements are essential for carotenoid production. The characteristics found in this work may be one of the mechanisms of persistence and / or resistance that confer abundance for Acidobacteria in soil.
publishDate 2017
dc.date.accessioned.fl_str_mv 2017-09-08T13:52:02Z
dc.date.issued.fl_str_mv 2017-03-29
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
status_str publishedVersion
format masterThesis
dc.identifier.citation.fl_str_mv PINTO, Ot??vio Henrique Bezerra. Caracteriza????o taxon??mica de Occallatibacter savannae AB23 e avalia????o enzim??tica e pigmentos de acidobacteria: um enfoque biotecnol??gico. 2017. 94 f. Disserta????o (Programa Stricto Sensu em Ci??ncias Gen??micas e Biotecnologia) - Universidade Cat??lica de Bras??lia, Bras??lia, 2017.
dc.identifier.uri.fl_str_mv https://bdtd.ucb.br:8443/jspui/handle/tede/2271
identifier_str_mv PINTO, Ot??vio Henrique Bezerra. Caracteriza????o taxon??mica de Occallatibacter savannae AB23 e avalia????o enzim??tica e pigmentos de acidobacteria: um enfoque biotecnol??gico. 2017. 94 f. Disserta????o (Programa Stricto Sensu em Ci??ncias Gen??micas e Biotecnologia) - Universidade Cat??lica de Bras??lia, Bras??lia, 2017.
url https://bdtd.ucb.br:8443/jspui/handle/tede/2271
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Universidade Cat??lica de Bras??lia
dc.publisher.program.fl_str_mv Programa Strictu Sensu em Ci??ncias Gen??micas e Biotecnologia
dc.publisher.initials.fl_str_mv UCB
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Escola de Sa??de e Medicina
publisher.none.fl_str_mv Universidade Cat??lica de Bras??lia
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