Assessment of morphophysiological and genotypic diversity of endophytic bacteria isolated from rice (Oryza sativa L.) plants

Detalhes bibliográficos
Autor(a) principal: Leonardo-Silva, Lucas
Data de Publicação: 2023
Outros Autores: Silva, Larissa Batista da, Ferreira, Enderson Petrônio de Brito, Santos, Karina Freire d'Eça Nogueira, Naves, Plinio Lázaro Faleiro, Martin-Didonet (In memoriam), Claudia Cristina Garcia
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista Caatinga
Texto Completo: https://periodicos.ufersa.edu.br/caatinga/article/view/11415
Resumo: Rice production in Brazil incurs high costs due to the significant use of agrochemicals. Some plant growth-promoting rhizobacteria (PGPR) can be used as alternative to fertilizers and phytosanitary products. Thus, the objective of this study was to characterize endophytic bacteria isolated from roots of rice plants. The isolates were characterized based on colony morphology, antibiotic resistance, carbon sources utilization, enzyme activity (catalase, amylase, protease, cellulase, and lipase), inorganic phosphate solubilization, and the 16S-23S rDNA intergenic region. Morphologically, 68% of the isolates presented a rapid growth rate, 46% presented abundant mucus production, and 77% formed viscous colonies. All isolates were resistant to nalidixic acid and 16% presented resistance to streptomycin. The majority (90%) used monosaccharides and disaccharides in carbon source assays. Most of the isolates (95%) were positive for catalase and 63.6% were positive for amylase, protease, lipase, and cellulase activities. Additionally, 59% of them were able to solubilize phosphate. The mean enzymatic index for amylase, cellulase, and protease was 2.8, 3.5, and 1.7 respectively. The similarity analysis revealed high diversity among the isolates, with similarity indices of 70% (based on morphological characteristics) and 60% (based on the intergenic region 16S-23S rDNA). Considering morphophysiological and genotypic characteristics, three promising isolates should be evaluated in studies under field conditions for the potential development of bioproducts to replace industrially manufactured inputs in rice crops.
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spelling Assessment of morphophysiological and genotypic diversity of endophytic bacteria isolated from rice (Oryza sativa L.) plantsAvaliação da diversidade morfofisiológica e genotípica de bactérias endofíticas isoladas de arroz (Oryza sativa L.)Arroz. Promoção de crescimento de plantas. PCR 16S-23S rDNA. Enzimas extracelulares.ice. Plant growth promotion. PCR 16S-23S rDNA. Extracellular enzymes.Rice production in Brazil incurs high costs due to the significant use of agrochemicals. Some plant growth-promoting rhizobacteria (PGPR) can be used as alternative to fertilizers and phytosanitary products. Thus, the objective of this study was to characterize endophytic bacteria isolated from roots of rice plants. The isolates were characterized based on colony morphology, antibiotic resistance, carbon sources utilization, enzyme activity (catalase, amylase, protease, cellulase, and lipase), inorganic phosphate solubilization, and the 16S-23S rDNA intergenic region. Morphologically, 68% of the isolates presented a rapid growth rate, 46% presented abundant mucus production, and 77% formed viscous colonies. All isolates were resistant to nalidixic acid and 16% presented resistance to streptomycin. The majority (90%) used monosaccharides and disaccharides in carbon source assays. Most of the isolates (95%) were positive for catalase and 63.6% were positive for amylase, protease, lipase, and cellulase activities. Additionally, 59% of them were able to solubilize phosphate. The mean enzymatic index for amylase, cellulase, and protease was 2.8, 3.5, and 1.7 respectively. The similarity analysis revealed high diversity among the isolates, with similarity indices of 70% (based on morphological characteristics) and 60% (based on the intergenic region 16S-23S rDNA). Considering morphophysiological and genotypic characteristics, three promising isolates should be evaluated in studies under field conditions for the potential development of bioproducts to replace industrially manufactured inputs in rice crops.O arroz apresenta altos custos de produção no Brasil devido ao elevado uso de agroquímicos. Algumas rizobactérias promotoras de crescimento de plantas (PGPR) podem ser utilizadas como alternativa aos fertilizantes e produtos fitossanitários. Este trabalho teve como objetivo caracterizar bactérias endofíticas obtidas de raízes de arroz. A caracterização dos isolados foi baseada na morfologia da colônia, resistência a antibióticos, uso de fontes de carbono, atividade enzimática (catalase, amilase, protease, celulase e lipase), solubilização de fosfato inorgânico e região intergênica do 16S-23S rDNA. Com base na morfologia, 68% dos isolados apresentaram crescimento rápido, 46% apresentaram produção abundante de muco e 77% apresentaram colônia viscosa. Todos os isolados foram resistentes ao ácido nalidíxico e 16% deles à estreptomicina. A maioria dos isolados (90%) utilizou monossacarídeos e dissacarídeos no ensaio da fonte de carbono. A maioria dos isolados (95%) foi positiva para catalase e 63,6% foram positivas para amilase, protease, lipase e celulase. Além disso, 59% foram capazes de solubilizar o fosfato. A média do índice enzimático para amilase, celulase e protease foi de 2,8, 3,5 e 1,7, respectivamente. A análise de similaridade revelou alta diversidade entre os isolados, com índice de similaridade de 70% (baseado nas características morfológicas) e 60% (baseado na análise da região intergênica 16S-23S rDNA). Com base nas características morfofisiológicas e genotípicas, três isolados promissores devem ser avaliados em estudos futuros em condições de campo, podendo gerar bioprodutos destinados a substituir insumos industrializados na cultura do arroz.Universidade Federal Rural do Semi-Árido2023-09-28info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://periodicos.ufersa.edu.br/caatinga/article/view/1141510.1590/1983-21252023v36n405rcREVISTA CAATINGA; Vol. 36 No. 4 (2023); 775-784Revista Caatinga; v. 36 n. 4 (2023); 775-7841983-21250100-316Xreponame:Revista Caatingainstname:Universidade Federal Rural do Semi-Árido (UFERSA)instacron:UFERSAenghttps://periodicos.ufersa.edu.br/caatinga/article/view/11415/11319Copyright (c) 2023 Revista Caatingainfo:eu-repo/semantics/openAccessLeonardo-Silva, LucasSilva, Larissa Batista da Ferreira, Enderson Petrônio de BritoSantos, Karina Freire d'Eça NogueiraNaves, Plinio Lázaro FaleiroMartin-Didonet (In memoriam), Claudia Cristina Garcia2023-09-28T13:12:02Zoai:ojs.periodicos.ufersa.edu.br:article/11415Revistahttps://periodicos.ufersa.edu.br/index.php/caatinga/indexPUBhttps://periodicos.ufersa.edu.br/index.php/caatinga/oaipatricio@ufersa.edu.br|| caatinga@ufersa.edu.br1983-21250100-316Xopendoar:2024-04-29T09:47:03.548189Revista Caatinga - Universidade Federal Rural do Semi-Árido (UFERSA)true
dc.title.none.fl_str_mv Assessment of morphophysiological and genotypic diversity of endophytic bacteria isolated from rice (Oryza sativa L.) plants
Avaliação da diversidade morfofisiológica e genotípica de bactérias endofíticas isoladas de arroz (Oryza sativa L.)
title Assessment of morphophysiological and genotypic diversity of endophytic bacteria isolated from rice (Oryza sativa L.) plants
spellingShingle Assessment of morphophysiological and genotypic diversity of endophytic bacteria isolated from rice (Oryza sativa L.) plants
Leonardo-Silva, Lucas
Arroz. Promoção de crescimento de plantas. PCR 16S-23S rDNA. Enzimas extracelulares.
ice. Plant growth promotion. PCR 16S-23S rDNA. Extracellular enzymes.
title_short Assessment of morphophysiological and genotypic diversity of endophytic bacteria isolated from rice (Oryza sativa L.) plants
title_full Assessment of morphophysiological and genotypic diversity of endophytic bacteria isolated from rice (Oryza sativa L.) plants
title_fullStr Assessment of morphophysiological and genotypic diversity of endophytic bacteria isolated from rice (Oryza sativa L.) plants
title_full_unstemmed Assessment of morphophysiological and genotypic diversity of endophytic bacteria isolated from rice (Oryza sativa L.) plants
title_sort Assessment of morphophysiological and genotypic diversity of endophytic bacteria isolated from rice (Oryza sativa L.) plants
author Leonardo-Silva, Lucas
author_facet Leonardo-Silva, Lucas
Silva, Larissa Batista da
Ferreira, Enderson Petrônio de Brito
Santos, Karina Freire d'Eça Nogueira
Naves, Plinio Lázaro Faleiro
Martin-Didonet (In memoriam), Claudia Cristina Garcia
author_role author
author2 Silva, Larissa Batista da
Ferreira, Enderson Petrônio de Brito
Santos, Karina Freire d'Eça Nogueira
Naves, Plinio Lázaro Faleiro
Martin-Didonet (In memoriam), Claudia Cristina Garcia
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Leonardo-Silva, Lucas
Silva, Larissa Batista da
Ferreira, Enderson Petrônio de Brito
Santos, Karina Freire d'Eça Nogueira
Naves, Plinio Lázaro Faleiro
Martin-Didonet (In memoriam), Claudia Cristina Garcia
dc.subject.por.fl_str_mv Arroz. Promoção de crescimento de plantas. PCR 16S-23S rDNA. Enzimas extracelulares.
ice. Plant growth promotion. PCR 16S-23S rDNA. Extracellular enzymes.
topic Arroz. Promoção de crescimento de plantas. PCR 16S-23S rDNA. Enzimas extracelulares.
ice. Plant growth promotion. PCR 16S-23S rDNA. Extracellular enzymes.
description Rice production in Brazil incurs high costs due to the significant use of agrochemicals. Some plant growth-promoting rhizobacteria (PGPR) can be used as alternative to fertilizers and phytosanitary products. Thus, the objective of this study was to characterize endophytic bacteria isolated from roots of rice plants. The isolates were characterized based on colony morphology, antibiotic resistance, carbon sources utilization, enzyme activity (catalase, amylase, protease, cellulase, and lipase), inorganic phosphate solubilization, and the 16S-23S rDNA intergenic region. Morphologically, 68% of the isolates presented a rapid growth rate, 46% presented abundant mucus production, and 77% formed viscous colonies. All isolates were resistant to nalidixic acid and 16% presented resistance to streptomycin. The majority (90%) used monosaccharides and disaccharides in carbon source assays. Most of the isolates (95%) were positive for catalase and 63.6% were positive for amylase, protease, lipase, and cellulase activities. Additionally, 59% of them were able to solubilize phosphate. The mean enzymatic index for amylase, cellulase, and protease was 2.8, 3.5, and 1.7 respectively. The similarity analysis revealed high diversity among the isolates, with similarity indices of 70% (based on morphological characteristics) and 60% (based on the intergenic region 16S-23S rDNA). Considering morphophysiological and genotypic characteristics, three promising isolates should be evaluated in studies under field conditions for the potential development of bioproducts to replace industrially manufactured inputs in rice crops.
publishDate 2023
dc.date.none.fl_str_mv 2023-09-28
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://periodicos.ufersa.edu.br/caatinga/article/view/11415
10.1590/1983-21252023v36n405rc
url https://periodicos.ufersa.edu.br/caatinga/article/view/11415
identifier_str_mv 10.1590/1983-21252023v36n405rc
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://periodicos.ufersa.edu.br/caatinga/article/view/11415/11319
dc.rights.driver.fl_str_mv Copyright (c) 2023 Revista Caatinga
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2023 Revista Caatinga
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal Rural do Semi-Árido
publisher.none.fl_str_mv Universidade Federal Rural do Semi-Árido
dc.source.none.fl_str_mv REVISTA CAATINGA; Vol. 36 No. 4 (2023); 775-784
Revista Caatinga; v. 36 n. 4 (2023); 775-784
1983-2125
0100-316X
reponame:Revista Caatinga
instname:Universidade Federal Rural do Semi-Árido (UFERSA)
instacron:UFERSA
instname_str Universidade Federal Rural do Semi-Árido (UFERSA)
instacron_str UFERSA
institution UFERSA
reponame_str Revista Caatinga
collection Revista Caatinga
repository.name.fl_str_mv Revista Caatinga - Universidade Federal Rural do Semi-Árido (UFERSA)
repository.mail.fl_str_mv patricio@ufersa.edu.br|| caatinga@ufersa.edu.br
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