Histogram score contributes for reliability of DNA content estimatives in Brachiaria spp
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Ciência e Agrotecnologia (Online) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542012000600001 |
Resumo: | Flow cytometry allows to estimate the DNA content of a large number of plants quickly. However, inadequate protocols can compromise the reliability of these estimates leading to variations in the values of DNA content the same species. The objective of this study was to propose an efficient protocol to estimate the DNA content of Brachiaria spp. genotypes with different ploidy levels using flow cytometry. We evaluated four genotypes (B. ruziziensis diploid and artificially tetraploidized; a tetraploid B. brizantha and a natural triploid hybrid), three buffer solutions (MgSO4, Galbraith and Tris-HCl) and three species as internal reference standards (Raphanus sativus, Solanum lycopersicum e Pisum sativum). The variables measured were: histogram score (1-5), coefficient of variation and estimation of DNA content. The best combination for the analysis of Brachiaria spp. DNA content was the use of MgSO4 buffer with R. sativus as a internal reference standard. Genome sizes expressed in picograms of DNA are presented for all genotypes and the importance of the histogram score on the results reliability of DNA content analyses were discussed. |
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Ciência e Agrotecnologia (Online) |
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Histogram score contributes for reliability of DNA content estimatives in Brachiaria sppBrachiaria ruziziensisBrachiaria brizanthacolchicinenuclear DNA contentFlow cytometry allows to estimate the DNA content of a large number of plants quickly. However, inadequate protocols can compromise the reliability of these estimates leading to variations in the values of DNA content the same species. The objective of this study was to propose an efficient protocol to estimate the DNA content of Brachiaria spp. genotypes with different ploidy levels using flow cytometry. We evaluated four genotypes (B. ruziziensis diploid and artificially tetraploidized; a tetraploid B. brizantha and a natural triploid hybrid), three buffer solutions (MgSO4, Galbraith and Tris-HCl) and three species as internal reference standards (Raphanus sativus, Solanum lycopersicum e Pisum sativum). The variables measured were: histogram score (1-5), coefficient of variation and estimation of DNA content. The best combination for the analysis of Brachiaria spp. DNA content was the use of MgSO4 buffer with R. sativus as a internal reference standard. Genome sizes expressed in picograms of DNA are presented for all genotypes and the importance of the histogram score on the results reliability of DNA content analyses were discussed.Editora da UFLA2012-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542012000600001Ciência e Agrotecnologia v.36 n.6 2012reponame:Ciência e Agrotecnologia (Online)instname:Universidade Federal de Lavras (UFLA)instacron:UFLA10.1590/S1413-70542012000600001info:eu-repo/semantics/openAccessTimbó,Ana Luiza de OliveiraPereira,Roselaine CristinaSantos,Vanderley Borges dosSouza Sobrinho,FaustoDavide,Lisete Chammaeng2012-12-17T00:00:00Zoai:scielo:S1413-70542012000600001Revistahttp://www.scielo.br/cagroPUBhttps://old.scielo.br/oai/scielo-oai.php||renpaiva@dbi.ufla.br|| editora@editora.ufla.br1981-18291413-7054opendoar:2022-11-22T16:31:14.828875Ciência e Agrotecnologia (Online) - Universidade Federal de Lavras (UFLA)true |
dc.title.none.fl_str_mv |
Histogram score contributes for reliability of DNA content estimatives in Brachiaria spp |
title |
Histogram score contributes for reliability of DNA content estimatives in Brachiaria spp |
spellingShingle |
Histogram score contributes for reliability of DNA content estimatives in Brachiaria spp Timbó,Ana Luiza de Oliveira Brachiaria ruziziensis Brachiaria brizantha colchicine nuclear DNA content |
title_short |
Histogram score contributes for reliability of DNA content estimatives in Brachiaria spp |
title_full |
Histogram score contributes for reliability of DNA content estimatives in Brachiaria spp |
title_fullStr |
Histogram score contributes for reliability of DNA content estimatives in Brachiaria spp |
title_full_unstemmed |
Histogram score contributes for reliability of DNA content estimatives in Brachiaria spp |
title_sort |
Histogram score contributes for reliability of DNA content estimatives in Brachiaria spp |
author |
Timbó,Ana Luiza de Oliveira |
author_facet |
Timbó,Ana Luiza de Oliveira Pereira,Roselaine Cristina Santos,Vanderley Borges dos Souza Sobrinho,Fausto Davide,Lisete Chamma |
author_role |
author |
author2 |
Pereira,Roselaine Cristina Santos,Vanderley Borges dos Souza Sobrinho,Fausto Davide,Lisete Chamma |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Timbó,Ana Luiza de Oliveira Pereira,Roselaine Cristina Santos,Vanderley Borges dos Souza Sobrinho,Fausto Davide,Lisete Chamma |
dc.subject.por.fl_str_mv |
Brachiaria ruziziensis Brachiaria brizantha colchicine nuclear DNA content |
topic |
Brachiaria ruziziensis Brachiaria brizantha colchicine nuclear DNA content |
description |
Flow cytometry allows to estimate the DNA content of a large number of plants quickly. However, inadequate protocols can compromise the reliability of these estimates leading to variations in the values of DNA content the same species. The objective of this study was to propose an efficient protocol to estimate the DNA content of Brachiaria spp. genotypes with different ploidy levels using flow cytometry. We evaluated four genotypes (B. ruziziensis diploid and artificially tetraploidized; a tetraploid B. brizantha and a natural triploid hybrid), three buffer solutions (MgSO4, Galbraith and Tris-HCl) and three species as internal reference standards (Raphanus sativus, Solanum lycopersicum e Pisum sativum). The variables measured were: histogram score (1-5), coefficient of variation and estimation of DNA content. The best combination for the analysis of Brachiaria spp. DNA content was the use of MgSO4 buffer with R. sativus as a internal reference standard. Genome sizes expressed in picograms of DNA are presented for all genotypes and the importance of the histogram score on the results reliability of DNA content analyses were discussed. |
publishDate |
2012 |
dc.date.none.fl_str_mv |
2012-12-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542012000600001 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542012000600001 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S1413-70542012000600001 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Editora da UFLA |
publisher.none.fl_str_mv |
Editora da UFLA |
dc.source.none.fl_str_mv |
Ciência e Agrotecnologia v.36 n.6 2012 reponame:Ciência e Agrotecnologia (Online) instname:Universidade Federal de Lavras (UFLA) instacron:UFLA |
instname_str |
Universidade Federal de Lavras (UFLA) |
instacron_str |
UFLA |
institution |
UFLA |
reponame_str |
Ciência e Agrotecnologia (Online) |
collection |
Ciência e Agrotecnologia (Online) |
repository.name.fl_str_mv |
Ciência e Agrotecnologia (Online) - Universidade Federal de Lavras (UFLA) |
repository.mail.fl_str_mv |
||renpaiva@dbi.ufla.br|| editora@editora.ufla.br |
_version_ |
1799874969140723712 |