Selection in several environments by BLP as an alternative to pooled anova in crop breeding

Detalhes bibliográficos
Autor(a) principal: Bueno Filho,Júlio Sílvio de Sousa
Data de Publicação: 2009
Outros Autores: Vencovsky,Roland
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Ciência e Agrotecnologia (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542009000500021
Resumo: Plant breeders often carry out genetic trials in balanced designs. That is not always the case with animal genetic trials. In plant breeding is usual to select progenies tested in several environments by pooled analysis of variance (ANOVA). This procedure is based on the global averages for each family, although genetic values of progenies are better viewed as random effects. Thus, the appropriate form of analysis is more likely to follow the mixed models approach to progeny tests, which became a common practice in animal breeding. Best Linear Unbiased Prediction (BLUP) is not a "method" but a feature of mixed model estimators (predictors) of random effects and may be derived in so many ways that it has the potential of unifying the statistical theory of linear models (Robinson, 1991). When estimates of fixed effects are present is possible to combine information from several different tests by simplifying BLUP, in these situations BLP also has unbiased properties and this lead to BLUP from straightforward heuristics. In this paper some advantages of BLP applied to plant breeding are discussed. Our focus is on how to deal with estimates of progeny means and variances from many environments to work out predictions that have "best" properties (minimum variance linear combinations of progenies' averages). A practical rule for relative weighting is worked out.
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spelling Selection in several environments by BLP as an alternative to pooled anova in crop breedingBLPplant breedingstatistical geneticsPlant breeders often carry out genetic trials in balanced designs. That is not always the case with animal genetic trials. In plant breeding is usual to select progenies tested in several environments by pooled analysis of variance (ANOVA). This procedure is based on the global averages for each family, although genetic values of progenies are better viewed as random effects. Thus, the appropriate form of analysis is more likely to follow the mixed models approach to progeny tests, which became a common practice in animal breeding. Best Linear Unbiased Prediction (BLUP) is not a "method" but a feature of mixed model estimators (predictors) of random effects and may be derived in so many ways that it has the potential of unifying the statistical theory of linear models (Robinson, 1991). When estimates of fixed effects are present is possible to combine information from several different tests by simplifying BLUP, in these situations BLP also has unbiased properties and this lead to BLUP from straightforward heuristics. In this paper some advantages of BLP applied to plant breeding are discussed. Our focus is on how to deal with estimates of progeny means and variances from many environments to work out predictions that have "best" properties (minimum variance linear combinations of progenies' averages). A practical rule for relative weighting is worked out.Editora da UFLA2009-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542009000500021Ciência e Agrotecnologia v.33 n.5 2009reponame:Ciência e Agrotecnologia (Online)instname:Universidade Federal de Lavras (UFLA)instacron:UFLA10.1590/S1413-70542009000500021info:eu-repo/semantics/openAccessBueno Filho,Júlio Sílvio de SousaVencovsky,Rolandeng2009-11-13T00:00:00Zoai:scielo:S1413-70542009000500021Revistahttp://www.scielo.br/cagroPUBhttps://old.scielo.br/oai/scielo-oai.php||renpaiva@dbi.ufla.br|| editora@editora.ufla.br1981-18291413-7054opendoar:2022-11-22T16:30:42.981605Ciência e Agrotecnologia (Online) - Universidade Federal de Lavras (UFLA)true
dc.title.none.fl_str_mv Selection in several environments by BLP as an alternative to pooled anova in crop breeding
title Selection in several environments by BLP as an alternative to pooled anova in crop breeding
spellingShingle Selection in several environments by BLP as an alternative to pooled anova in crop breeding
Bueno Filho,Júlio Sílvio de Sousa
BLP
plant breeding
statistical genetics
title_short Selection in several environments by BLP as an alternative to pooled anova in crop breeding
title_full Selection in several environments by BLP as an alternative to pooled anova in crop breeding
title_fullStr Selection in several environments by BLP as an alternative to pooled anova in crop breeding
title_full_unstemmed Selection in several environments by BLP as an alternative to pooled anova in crop breeding
title_sort Selection in several environments by BLP as an alternative to pooled anova in crop breeding
author Bueno Filho,Júlio Sílvio de Sousa
author_facet Bueno Filho,Júlio Sílvio de Sousa
Vencovsky,Roland
author_role author
author2 Vencovsky,Roland
author2_role author
dc.contributor.author.fl_str_mv Bueno Filho,Júlio Sílvio de Sousa
Vencovsky,Roland
dc.subject.por.fl_str_mv BLP
plant breeding
statistical genetics
topic BLP
plant breeding
statistical genetics
description Plant breeders often carry out genetic trials in balanced designs. That is not always the case with animal genetic trials. In plant breeding is usual to select progenies tested in several environments by pooled analysis of variance (ANOVA). This procedure is based on the global averages for each family, although genetic values of progenies are better viewed as random effects. Thus, the appropriate form of analysis is more likely to follow the mixed models approach to progeny tests, which became a common practice in animal breeding. Best Linear Unbiased Prediction (BLUP) is not a "method" but a feature of mixed model estimators (predictors) of random effects and may be derived in so many ways that it has the potential of unifying the statistical theory of linear models (Robinson, 1991). When estimates of fixed effects are present is possible to combine information from several different tests by simplifying BLUP, in these situations BLP also has unbiased properties and this lead to BLUP from straightforward heuristics. In this paper some advantages of BLP applied to plant breeding are discussed. Our focus is on how to deal with estimates of progeny means and variances from many environments to work out predictions that have "best" properties (minimum variance linear combinations of progenies' averages). A practical rule for relative weighting is worked out.
publishDate 2009
dc.date.none.fl_str_mv 2009-10-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542009000500021
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542009000500021
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1413-70542009000500021
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Editora da UFLA
publisher.none.fl_str_mv Editora da UFLA
dc.source.none.fl_str_mv Ciência e Agrotecnologia v.33 n.5 2009
reponame:Ciência e Agrotecnologia (Online)
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Ciência e Agrotecnologia (Online)
collection Ciência e Agrotecnologia (Online)
repository.name.fl_str_mv Ciência e Agrotecnologia (Online) - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv ||renpaiva@dbi.ufla.br|| editora@editora.ufla.br
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