Selection in several environments by BLP as an alternative to pooled anova in crop breeding

Detalhes bibliográficos
Autor(a) principal: Bueno Filho, Júlio Sílvio de Sousa
Data de Publicação: 2009
Outros Autores: Vencovsky, Roland
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542009000500021
http://repositorio.ufla.br/jspui/handle/1/7033
Resumo: Plant breeders often carry out genetic trials in balanced designs. That is not always the case with animal genetic trials. In plant breeding is usual to select progenies tested in several environments by pooled analysis of variance (ANOVA). This procedure is based on the global averages for each family, although genetic values of progenies are better viewed as random effects. Thus, the appropriate form of analysis is more likely to follow the mixed models approach to progeny tests, which became a common practice in animal breeding. Best Linear Unbiased Prediction (BLUP) is not a "method" but a feature of mixed model estimators (predictors) of random effects and may be derived in so many ways that it has the potential of unifying the statistical theory of linear models (Robinson, 1991). When estimates of fixed effects are present is possible to combine information from several different tests by simplifying BLUP, in these situations BLP also has unbiased properties and this lead to BLUP from straightforward heuristics. In this paper some advantages of BLP applied to plant breeding are discussed. Our focus is on how to deal with estimates of progeny means and variances from many environments to work out predictions that have "best" properties (minimum variance linear combinations of progenies' averages). A practical rule for relative weighting is worked out.
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spelling Selection in several environments by BLP as an alternative to pooled anova in crop breedingBest Linear Prediction (BLP)Plant breedingStatistical geneticsPlant breeders often carry out genetic trials in balanced designs. That is not always the case with animal genetic trials. In plant breeding is usual to select progenies tested in several environments by pooled analysis of variance (ANOVA). This procedure is based on the global averages for each family, although genetic values of progenies are better viewed as random effects. Thus, the appropriate form of analysis is more likely to follow the mixed models approach to progeny tests, which became a common practice in animal breeding. Best Linear Unbiased Prediction (BLUP) is not a "method" but a feature of mixed model estimators (predictors) of random effects and may be derived in so many ways that it has the potential of unifying the statistical theory of linear models (Robinson, 1991). When estimates of fixed effects are present is possible to combine information from several different tests by simplifying BLUP, in these situations BLP also has unbiased properties and this lead to BLUP from straightforward heuristics. In this paper some advantages of BLP applied to plant breeding are discussed. Our focus is on how to deal with estimates of progeny means and variances from many environments to work out predictions that have "best" properties (minimum variance linear combinations of progenies' averages). A practical rule for relative weighting is worked out.Editora da Universidade Federal de Lavras2009-10-012015-04-30T13:35:23Z2015-04-30T13:35:23Z2015-04-30info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articletext/htmlhttp://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542009000500021BUENO FILHO, J. S. de S.; VENCOVSKY, R. Selection in several environments by BLP as an alternative to pooled anova in crop breeding. Ciência e Agrotecnologia, Lavras, v. 33, n. 5, p. 1342-1350, out. 2009.http://repositorio.ufla.br/jspui/handle/1/7033Ciência e Agrotecnologia v.33 n.5 2009reponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLABueno Filho, Júlio Sílvio de SousaVencovsky, Rolandenginfo:eu-repo/semantics/openAccess2016-09-27T17:42:15Zoai:localhost:1/7033Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2016-09-27T17:42:15Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv Selection in several environments by BLP as an alternative to pooled anova in crop breeding
title Selection in several environments by BLP as an alternative to pooled anova in crop breeding
spellingShingle Selection in several environments by BLP as an alternative to pooled anova in crop breeding
Bueno Filho, Júlio Sílvio de Sousa
Best Linear Prediction (BLP)
Plant breeding
Statistical genetics
title_short Selection in several environments by BLP as an alternative to pooled anova in crop breeding
title_full Selection in several environments by BLP as an alternative to pooled anova in crop breeding
title_fullStr Selection in several environments by BLP as an alternative to pooled anova in crop breeding
title_full_unstemmed Selection in several environments by BLP as an alternative to pooled anova in crop breeding
title_sort Selection in several environments by BLP as an alternative to pooled anova in crop breeding
author Bueno Filho, Júlio Sílvio de Sousa
author_facet Bueno Filho, Júlio Sílvio de Sousa
Vencovsky, Roland
author_role author
author2 Vencovsky, Roland
author2_role author
dc.contributor.author.fl_str_mv Bueno Filho, Júlio Sílvio de Sousa
Vencovsky, Roland
dc.subject.por.fl_str_mv Best Linear Prediction (BLP)
Plant breeding
Statistical genetics
topic Best Linear Prediction (BLP)
Plant breeding
Statistical genetics
description Plant breeders often carry out genetic trials in balanced designs. That is not always the case with animal genetic trials. In plant breeding is usual to select progenies tested in several environments by pooled analysis of variance (ANOVA). This procedure is based on the global averages for each family, although genetic values of progenies are better viewed as random effects. Thus, the appropriate form of analysis is more likely to follow the mixed models approach to progeny tests, which became a common practice in animal breeding. Best Linear Unbiased Prediction (BLUP) is not a "method" but a feature of mixed model estimators (predictors) of random effects and may be derived in so many ways that it has the potential of unifying the statistical theory of linear models (Robinson, 1991). When estimates of fixed effects are present is possible to combine information from several different tests by simplifying BLUP, in these situations BLP also has unbiased properties and this lead to BLUP from straightforward heuristics. In this paper some advantages of BLP applied to plant breeding are discussed. Our focus is on how to deal with estimates of progeny means and variances from many environments to work out predictions that have "best" properties (minimum variance linear combinations of progenies' averages). A practical rule for relative weighting is worked out.
publishDate 2009
dc.date.none.fl_str_mv 2009-10-01
2015-04-30T13:35:23Z
2015-04-30T13:35:23Z
2015-04-30
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542009000500021
BUENO FILHO, J. S. de S.; VENCOVSKY, R. Selection in several environments by BLP as an alternative to pooled anova in crop breeding. Ciência e Agrotecnologia, Lavras, v. 33, n. 5, p. 1342-1350, out. 2009.
http://repositorio.ufla.br/jspui/handle/1/7033
url http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542009000500021
http://repositorio.ufla.br/jspui/handle/1/7033
identifier_str_mv BUENO FILHO, J. S. de S.; VENCOVSKY, R. Selection in several environments by BLP as an alternative to pooled anova in crop breeding. Ciência e Agrotecnologia, Lavras, v. 33, n. 5, p. 1342-1350, out. 2009.
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Editora da Universidade Federal de Lavras
publisher.none.fl_str_mv Editora da Universidade Federal de Lavras
dc.source.none.fl_str_mv Ciência e Agrotecnologia v.33 n.5 2009
reponame:Repositório Institucional da UFLA
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Repositório Institucional da UFLA
collection Repositório Institucional da UFLA
repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv nivaldo@ufla.br || repositorio.biblioteca@ufla.br
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