Probiogenômica de Lactobacillus delbrueckii CIDCA 133

Detalhes bibliográficos
Autor(a) principal: Luís Cláudio Lima de Jesus
Data de Publicação: 2022
Tipo de documento: Tese
Idioma: por
Título da fonte: Repositório Institucional da UFMG
Texto Completo: http://hdl.handle.net/1843/53495
Resumo: Lactobacillus delbrueckii subsp. lactis CIDCA 133 is a bacterium that has probiotic and therapeutic properties reported only by in vitro studies. There is no scientific evidence about the probiotic potential of this strain in vivo, as well as which proteins and molecular mechanisms would be related to its beneficial effects and its safe status for consumption. Genomic-level analyses, coupled with in vitro and in vivo studies, have been used to characterize new probiotic candidates, and provide new insights into the key genetic factors and molecular mechanisms associated with the functional and safety characteristics of these microorganisms. Thus, with the probiogenomic approach, this study characterized the probiotic profile of CIDCA 133 in vivo, using a model of intestinal inflammation, and investigated the possible genes associated with beneficial and safety effects for future probiotic applications. The in vivo study demonstrated that CIDCA 133 is a potential probiotic strain capable of ameliorating histopathological inflammatory damage in the intestinal mucosa induced by the chemotherapeutic agent 5-Fluorouracil. CIDCA 133 also exhibits immunostimulatory properties capable of increasing gene expression of anti-inflammatory cytokines Il10 and Tgfb1 and inhibition of markers associated with activation of the NF-κB inflammatory pathway. These effects may be associated with secreted, membrane/bacterial surface proteins identified in silico and ratified in vivo, in which it was observed that even after heat inactivation, CIDCA 133 maintains anti-inflammatory effects, demonstrating that this property can be attributed to proteinaceous and non-proteinaceous components present on the cell surface. Many of these genetic factors were also identified, through comparative genomics, in other probiotic strains of the species, and the PrtB protein seems to be the target candidate responsible for the anti-inflammatory properties of the probiotic strains of L. delbrueckii. Phenotypic assays also demonstrated that CIDCA 133 survives acid, osmotic, and heat stress. Furthermore, this strain exhibits antibacterial activity against pathogenic bacteria, possibly through bacteriocins and the production of organic acids such as lactate, whose genes were identified in silico. On the other hand, regarding safety, the genomic analysis showed that CIDCA 133 contains genes associated with virulence, toxic metabolites, and antimicrobial resistance. However, none of these genes is inserted in prophage and plasmid regions. At the phenotypic level, antimicrobial resistance of CIDCA 133 to the antibiotics streptomycin and gentamicin was observed, but no hemolytic activity and mucin degradation was exhibited by the strain. Furthermore, no adverse effects were observed in the clinical and histopathological analysis of healthy mice after consumption of the strain (5 x 10^7 CFU/mL) for 13 consecutive days. Overall, the findings of the present work show that CIDCA 133 exhibits beneficial functional characteristics in vivo and reveals that this strain presents a certain level of safety to be explored for consumption and future probiotic applications.
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spelling Probiogenômica de Lactobacillus delbrueckii CIDCA 133GenômicaProbióticoParaprobióticoImunomodulaçãoAtividade antimicrobianaSegurançaResistência aos AntibióticosGenômicaProbióticosImunomodulaçãoAnti-InfecciososResistência Microbiana a MedicamentosLactobacillus delbrueckii subsp. lactis CIDCA 133 is a bacterium that has probiotic and therapeutic properties reported only by in vitro studies. There is no scientific evidence about the probiotic potential of this strain in vivo, as well as which proteins and molecular mechanisms would be related to its beneficial effects and its safe status for consumption. Genomic-level analyses, coupled with in vitro and in vivo studies, have been used to characterize new probiotic candidates, and provide new insights into the key genetic factors and molecular mechanisms associated with the functional and safety characteristics of these microorganisms. Thus, with the probiogenomic approach, this study characterized the probiotic profile of CIDCA 133 in vivo, using a model of intestinal inflammation, and investigated the possible genes associated with beneficial and safety effects for future probiotic applications. The in vivo study demonstrated that CIDCA 133 is a potential probiotic strain capable of ameliorating histopathological inflammatory damage in the intestinal mucosa induced by the chemotherapeutic agent 5-Fluorouracil. CIDCA 133 also exhibits immunostimulatory properties capable of increasing gene expression of anti-inflammatory cytokines Il10 and Tgfb1 and inhibition of markers associated with activation of the NF-κB inflammatory pathway. These effects may be associated with secreted, membrane/bacterial surface proteins identified in silico and ratified in vivo, in which it was observed that even after heat inactivation, CIDCA 133 maintains anti-inflammatory effects, demonstrating that this property can be attributed to proteinaceous and non-proteinaceous components present on the cell surface. Many of these genetic factors were also identified, through comparative genomics, in other probiotic strains of the species, and the PrtB protein seems to be the target candidate responsible for the anti-inflammatory properties of the probiotic strains of L. delbrueckii. Phenotypic assays also demonstrated that CIDCA 133 survives acid, osmotic, and heat stress. Furthermore, this strain exhibits antibacterial activity against pathogenic bacteria, possibly through bacteriocins and the production of organic acids such as lactate, whose genes were identified in silico. On the other hand, regarding safety, the genomic analysis showed that CIDCA 133 contains genes associated with virulence, toxic metabolites, and antimicrobial resistance. However, none of these genes is inserted in prophage and plasmid regions. At the phenotypic level, antimicrobial resistance of CIDCA 133 to the antibiotics streptomycin and gentamicin was observed, but no hemolytic activity and mucin degradation was exhibited by the strain. Furthermore, no adverse effects were observed in the clinical and histopathological analysis of healthy mice after consumption of the strain (5 x 10^7 CFU/mL) for 13 consecutive days. Overall, the findings of the present work show that CIDCA 133 exhibits beneficial functional characteristics in vivo and reveals that this strain presents a certain level of safety to be explored for consumption and future probiotic applications.Lactobacillus delbrueckii subsp. lactis CIDCA 133 é uma bactéria que tem propriedades probióticas e terapêuticas relatadas apenas por estudos in vitro. Não há evidências científicas sobre o potencial probiótico desta linhagem in vivo, assim como quais as proteínas e mecanismos moleculares estariam relacionados aos seus efeitos benéficos e ao seu status de segurança para o consumo. Análises ao nível genômico, associadas com estudos in vitro e in vivo, vêm sendo utilizadas para a caracterização de novos candidatos probiótico, e fornecendo novas perspectivas sobre os principais fatores genéticos e mecanismos moleculares associados às características funcionais e de segurança destes microrganismos. Deste modo, com a abordagem probiogenômica, este estudo caracterizou o perfil probiótico de CIDCA 133 in vivo, utilizando um modelo de inflamação intestinal, e investigou os possíveis genes associados aos efeitos benéficos e de segurança para futuras aplicações probióticas. O estudo in vivo demonstrou que CIDCA 133 é uma potencial linhagem probiótica capaz de melhorar danos inflamatórios histopatológicos na mucosa intestinal induzida pelo agente quimioterápico 5-Fluorouracil. CIDCA 133 apresenta também propriedades imunoestimulatórias capazes de aumentar a expressão gênica de citocinas anti- inflamatórias Il10 e Tgfb1 e inibição de marcadores associados à ativação da via inflamatória NF-κB. Esses efeitos podem estar associados a proteínas secretadas, de membrana/expostas à superfície bacteriana identificadas in silico e ratificados in vivo, no qual foi observado que, mesmo após inativação pelo calor, CIDCA 133 mantém efeitos anti-inflamatórios, demonstrando que esta propriedade pode ser atribuida aos componentes protéicos e não- protéicos presentes na superficie celular. Muitos desses fatores genéticos foram também identificados, por meio de genômica comparativa, em outras linhagens probióticas da espécie, sendo que a proteína PrtB parece ser a candidata alvo responsável pelas propriedades anti-inflamatórias das linhagens probióticas da espécie L. delbrueckii. Os ensaios fenotípicos demonstraram também que CIDCA 133 sobrevive ao estresse ácido, osmótico e térmico. Além disso, esta linhagem apresenta atividade antibacteriana contra bactérias patogênicas, possivelmente por meio de bacteriocinas e produção de ácidos orgânicos como lactato, cujos genes foram identificados in silico. Por outro lado, em relação à segurança, a análise genômica mostrou que CIDCA 133 contém genes associados a virulência, metabólitos tóxicos e resistência a antimicrobianos. No entanto, nenhum desses genes está inserido em regiões de profagos e plasmídeo. Ao nível fenotípico foi observada resistência antimicrobiana de CIDCA 133 aos antibióticos estreptomicina e gentamicina, mas nenhuma atividade hemolítica e degradação da mucina foi exibida pela linhagem. Além disso, nenhum efeito adverso foi observado na análise clínica e histopatológica de camundongos saudáveis após o consumo da linhagem (5 x 10^7 UFC/mL) por 13 dias consecutivos. No geral, os achados do presente trabalho mostram que CIDCA 133 apresenta características funcionais benéficas in vivo e revelou que esta linhagem apresenta determinado nível de segurança para ser explorada para o consumo e futuras aplicações probióticas.CNPq - Conselho Nacional de Desenvolvimento Científico e TecnológicoUniversidade Federal de Minas GeraisBrasilICB - DEPARTAMENTO DE BIOLOGIA GERALPrograma de Pós-Graduação em GenéticaUFMGVasco Ariston de Carvalho Azevedohttp://lattes.cnpq.br/1020477751003832Flávia Figueira AburjaileHilário MantovaniFlaviano dos Santos MartinsAnderson MiyoshiUlisses de Pádua PereiraLuís Cláudio Lima de Jesus2023-05-17T15:51:09Z2023-05-17T15:51:09Z2022-07-28info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfhttp://hdl.handle.net/1843/53495porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFMGinstname:Universidade Federal de Minas Gerais (UFMG)instacron:UFMG2023-05-17T15:51:09Zoai:repositorio.ufmg.br:1843/53495Repositório InstitucionalPUBhttps://repositorio.ufmg.br/oairepositorio@ufmg.bropendoar:2023-05-17T15:51:09Repositório Institucional da UFMG - Universidade Federal de Minas Gerais (UFMG)false
dc.title.none.fl_str_mv Probiogenômica de Lactobacillus delbrueckii CIDCA 133
title Probiogenômica de Lactobacillus delbrueckii CIDCA 133
spellingShingle Probiogenômica de Lactobacillus delbrueckii CIDCA 133
Luís Cláudio Lima de Jesus
Genômica
Probiótico
Paraprobiótico
Imunomodulação
Atividade antimicrobiana
Segurança
Resistência aos Antibióticos
Genômica
Probióticos
Imunomodulação
Anti-Infecciosos
Resistência Microbiana a Medicamentos
title_short Probiogenômica de Lactobacillus delbrueckii CIDCA 133
title_full Probiogenômica de Lactobacillus delbrueckii CIDCA 133
title_fullStr Probiogenômica de Lactobacillus delbrueckii CIDCA 133
title_full_unstemmed Probiogenômica de Lactobacillus delbrueckii CIDCA 133
title_sort Probiogenômica de Lactobacillus delbrueckii CIDCA 133
author Luís Cláudio Lima de Jesus
author_facet Luís Cláudio Lima de Jesus
author_role author
dc.contributor.none.fl_str_mv Vasco Ariston de Carvalho Azevedo
http://lattes.cnpq.br/1020477751003832
Flávia Figueira Aburjaile
Hilário Mantovani
Flaviano dos Santos Martins
Anderson Miyoshi
Ulisses de Pádua Pereira
dc.contributor.author.fl_str_mv Luís Cláudio Lima de Jesus
dc.subject.por.fl_str_mv Genômica
Probiótico
Paraprobiótico
Imunomodulação
Atividade antimicrobiana
Segurança
Resistência aos Antibióticos
Genômica
Probióticos
Imunomodulação
Anti-Infecciosos
Resistência Microbiana a Medicamentos
topic Genômica
Probiótico
Paraprobiótico
Imunomodulação
Atividade antimicrobiana
Segurança
Resistência aos Antibióticos
Genômica
Probióticos
Imunomodulação
Anti-Infecciosos
Resistência Microbiana a Medicamentos
description Lactobacillus delbrueckii subsp. lactis CIDCA 133 is a bacterium that has probiotic and therapeutic properties reported only by in vitro studies. There is no scientific evidence about the probiotic potential of this strain in vivo, as well as which proteins and molecular mechanisms would be related to its beneficial effects and its safe status for consumption. Genomic-level analyses, coupled with in vitro and in vivo studies, have been used to characterize new probiotic candidates, and provide new insights into the key genetic factors and molecular mechanisms associated with the functional and safety characteristics of these microorganisms. Thus, with the probiogenomic approach, this study characterized the probiotic profile of CIDCA 133 in vivo, using a model of intestinal inflammation, and investigated the possible genes associated with beneficial and safety effects for future probiotic applications. The in vivo study demonstrated that CIDCA 133 is a potential probiotic strain capable of ameliorating histopathological inflammatory damage in the intestinal mucosa induced by the chemotherapeutic agent 5-Fluorouracil. CIDCA 133 also exhibits immunostimulatory properties capable of increasing gene expression of anti-inflammatory cytokines Il10 and Tgfb1 and inhibition of markers associated with activation of the NF-κB inflammatory pathway. These effects may be associated with secreted, membrane/bacterial surface proteins identified in silico and ratified in vivo, in which it was observed that even after heat inactivation, CIDCA 133 maintains anti-inflammatory effects, demonstrating that this property can be attributed to proteinaceous and non-proteinaceous components present on the cell surface. Many of these genetic factors were also identified, through comparative genomics, in other probiotic strains of the species, and the PrtB protein seems to be the target candidate responsible for the anti-inflammatory properties of the probiotic strains of L. delbrueckii. Phenotypic assays also demonstrated that CIDCA 133 survives acid, osmotic, and heat stress. Furthermore, this strain exhibits antibacterial activity against pathogenic bacteria, possibly through bacteriocins and the production of organic acids such as lactate, whose genes were identified in silico. On the other hand, regarding safety, the genomic analysis showed that CIDCA 133 contains genes associated with virulence, toxic metabolites, and antimicrobial resistance. However, none of these genes is inserted in prophage and plasmid regions. At the phenotypic level, antimicrobial resistance of CIDCA 133 to the antibiotics streptomycin and gentamicin was observed, but no hemolytic activity and mucin degradation was exhibited by the strain. Furthermore, no adverse effects were observed in the clinical and histopathological analysis of healthy mice after consumption of the strain (5 x 10^7 CFU/mL) for 13 consecutive days. Overall, the findings of the present work show that CIDCA 133 exhibits beneficial functional characteristics in vivo and reveals that this strain presents a certain level of safety to be explored for consumption and future probiotic applications.
publishDate 2022
dc.date.none.fl_str_mv 2022-07-28
2023-05-17T15:51:09Z
2023-05-17T15:51:09Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1843/53495
url http://hdl.handle.net/1843/53495
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Minas Gerais
Brasil
ICB - DEPARTAMENTO DE BIOLOGIA GERAL
Programa de Pós-Graduação em Genética
UFMG
publisher.none.fl_str_mv Universidade Federal de Minas Gerais
Brasil
ICB - DEPARTAMENTO DE BIOLOGIA GERAL
Programa de Pós-Graduação em Genética
UFMG
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFMG
instname:Universidade Federal de Minas Gerais (UFMG)
instacron:UFMG
instname_str Universidade Federal de Minas Gerais (UFMG)
instacron_str UFMG
institution UFMG
reponame_str Repositório Institucional da UFMG
collection Repositório Institucional da UFMG
repository.name.fl_str_mv Repositório Institucional da UFMG - Universidade Federal de Minas Gerais (UFMG)
repository.mail.fl_str_mv repositorio@ufmg.br
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