The circulation of human astrovirus genotypes in the Central West Region of Brazil
Autor(a) principal: | |
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Data de Publicação: | 2009 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFMS |
Texto Completo: | https://repositorio.ufms.br/handle/123456789/143 |
Resumo: | Out of 1,588 faecal samples of children taken from three locations of the Central West Region of Brazil, 57 were positive for astroviruses (HAstVs) using reverse transcription-polymerase chain reaction (RT-PCR). They were genotyped by nested RT-PCR and/or genomic sequencing. HAstV-1 (42.8%), HAstV-2 (23.2%), HAstV-3 (3.6%), HAstV-4 (14.3%) and HAstVs -5, -6, -7 and -8 (1.8% each) were detected. In Goiânia and Campo Grande, HAstV-1 was the most frequently detected genotype while in Brasília (DF) it was HAstV-2. Shifts in the circulation of astrovirus genotypes were observed in DF and Campo Grande. All samples collected by rectal swabs were viral negative. The astrovirus genotypes were detected in all age groups and there was no correlation between genotype and age group. |
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2011-07-20T17:36:02Z2021-09-30T19:56:45Z2009SILVA, Paula Andreia et al . The circulation of human astrovirus genotypes in the Central West Region of Brazil. Mem. Inst. Oswaldo Cruz, Rio de Janeiro, v. 104, n. 4, July 2009 . Available from <http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762009000400021&lng=en&nrm=iso>. access on 20 July 2011. doi: 10.1590/S0074-02762009000400021.https://repositorio.ufms.br/handle/123456789/14310.1590/S0074-02762009000400021Out of 1,588 faecal samples of children taken from three locations of the Central West Region of Brazil, 57 were positive for astroviruses (HAstVs) using reverse transcription-polymerase chain reaction (RT-PCR). They were genotyped by nested RT-PCR and/or genomic sequencing. HAstV-1 (42.8%), HAstV-2 (23.2%), HAstV-3 (3.6%), HAstV-4 (14.3%) and HAstVs -5, -6, -7 and -8 (1.8% each) were detected. In Goiânia and Campo Grande, HAstV-1 was the most frequently detected genotype while in Brasília (DF) it was HAstV-2. Shifts in the circulation of astrovirus genotypes were observed in DF and Campo Grande. All samples collected by rectal swabs were viral negative. The astrovirus genotypes were detected in all age groups and there was no correlation between genotype and age group.engMemórias do Instituto Oswaldo CruzMamastrovirusGenótipoGenotypeBrazilNested-PCRThe circulation of human astrovirus genotypes in the Central West Region of Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleSilva, Paula AndreiaSantos, Rodrigo Alessandro TôgoCosta, Paulo Sérgio Sucasas daTeixeira, José Marcus SócratesGiugliano, Loreny GimenesAndreasi, Márcia Sueli AssisLeite, José Paulo GagliardiSchreier, EcakartCardoso, Divina das Dôres de Paulainfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFMSinstname:Universidade Federal de Mato Grosso do Sul (UFMS)instacron:UFMSTHUMBNAILThe circulation of human astrovirus genotypes.pdf.jpgThe circulation of human astrovirus genotypes.pdf.jpgGenerated Thumbnailimage/jpeg1651https://repositorio.ufms.br/bitstream/123456789/143/4/The%20circulation%20of%20human%20astrovirus%20genotypes.pdf.jpg5a90a8e7ec0922b643772e5178981f88MD54ORIGINALThe circulation of human astrovirus genotypes.pdfThe circulation of human astrovirus genotypes.pdfapplication/pdf480549https://repositorio.ufms.br/bitstream/123456789/143/1/The%20circulation%20of%20human%20astrovirus%20genotypes.pdf708d6de545e66530b68f097a7aecdc37MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.ufms.br/bitstream/123456789/143/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52TEXTThe circulation of human astrovirus genotypes.pdf.txtThe circulation of human astrovirus genotypes.pdf.txtExtracted texttext/plain21464https://repositorio.ufms.br/bitstream/123456789/143/3/The%20circulation%20of%20human%20astrovirus%20genotypes.pdf.txt0c269c3daf2f9a17d18ce99ad1b045aeMD53123456789/1432021-09-30 15:56:45.753oai:repositorio.ufms.br:123456789/143Tk9URTogUExBQ0UgWU9VUiBPV04gTElDRU5TRSBIRVJFClRoaXMgc2FtcGxlIGxpY2Vuc2UgaXMgcHJvdmlkZWQgZm9yIGluZm9ybWF0aW9uYWwgcHVycG9zZXMgb25seS4KCk5PTi1FWENMVVNJVkUgRElTVFJJQlVUSU9OIExJQ0VOU0UKCkJ5IHNpZ25pbmcgYW5kIHN1Ym1pdHRpbmcgdGhpcyBsaWNlbnNlLCB5b3UgKHRoZSBhdXRob3Iocykgb3IgY29weXJpZ2h0Cm93bmVyKSBncmFudHMgdG8gRFNwYWNlIFVuaXZlcnNpdHkgKERTVSkgdGhlIG5vbi1leGNsdXNpdmUgcmlnaHQgdG8gcmVwcm9kdWNlLAp0cmFuc2xhdGUgKGFzIGRlZmluZWQgYmVsb3cpLCBhbmQvb3IgZGlzdHJpYnV0ZSB5b3VyIHN1Ym1pc3Npb24gKGluY2x1ZGluZwp0aGUgYWJzdHJhY3QpIHdvcmxkd2lkZSBpbiBwcmludCBhbmQgZWxlY3Ryb25pYyBmb3JtYXQgYW5kIGluIGFueSBtZWRpdW0sCmluY2x1ZGluZyBidXQgbm90IGxpbWl0ZWQgdG8gYXVkaW8gb3IgdmlkZW8uCgpZb3UgYWdyZWUgdGhhdCBEU1UgbWF5LCB3aXRob3V0IGNoYW5naW5nIHRoZSBjb250ZW50LCB0cmFuc2xhdGUgdGhlCnN1Ym1pc3Npb24gdG8gYW55IG1lZGl1bSBvciBmb3JtYXQgZm9yIHRoZSBwdXJwb3NlIG9mIHByZXNlcnZhdGlvbi4KCllvdSBhbHNvIGFncmVlIHRoYXQgRFNVIG1heSBrZWVwIG1vcmUgdGhhbiBvbmUgY29weSBvZiB0aGlzIHN1Ym1pc3Npb24gZm9yCnB1cnBvc2VzIG9mIHNlY3VyaXR5LCBiYWNrLXVwIGFuZCBwcmVzZXJ2YXRpb24uCgpZb3UgcmVwcmVzZW50IHRoYXQgdGhlIHN1Ym1pc3Npb24gaXMgeW91ciBvcmlnaW5hbCB3b3JrLCBhbmQgdGhhdCB5b3UgaGF2ZQp0aGUgcmlnaHQgdG8gZ3JhbnQgdGhlIHJpZ2h0cyBjb250YWluZWQgaW4gdGhpcyBsaWNlbnNlLiBZb3UgYWxzbyByZXByZXNlbnQKdGhhdCB5b3VyIHN1Ym1pc3Npb24gZG9lcyBub3QsIHRvIHRoZSBiZXN0IG9mIHlvdXIga25vd2xlZGdlLCBpbmZyaW5nZSB1cG9uCmFueW9uZSdzIGNvcHlyaWdodC4KCklmIHRoZSBzdWJtaXNzaW9uIGNvbnRhaW5zIG1hdGVyaWFsIGZvciB3aGljaCB5b3UgZG8gbm90IGhvbGQgY29weXJpZ2h0LAp5b3UgcmVwcmVzZW50IHRoYXQgeW91IGhhdmUgb2J0YWluZWQgdGhlIHVucmVzdHJpY3RlZCBwZXJtaXNzaW9uIG9mIHRoZQpjb3B5cmlnaHQgb3duZXIgdG8gZ3JhbnQgRFNVIHRoZSByaWdodHMgcmVxdWlyZWQgYnkgdGhpcyBsaWNlbnNlLCBhbmQgdGhhdApzdWNoIHRoaXJkLXBhcnR5IG93bmVkIG1hdGVyaWFsIGlzIGNsZWFybHkgaWRlbnRpZmllZCBhbmQgYWNrbm93bGVkZ2VkCndpdGhpbiB0aGUgdGV4dCBvciBjb250ZW50IG9mIHRoZSBzdWJtaXNzaW9uLgoKSUYgVEhFIFNVQk1JU1NJT04gSVMgQkFTRUQgVVBPTiBXT1JLIFRIQVQgSEFTIEJFRU4gU1BPTlNPUkVEIE9SIFNVUFBPUlRFRApCWSBBTiBBR0VOQ1kgT1IgT1JHQU5JWkFUSU9OIE9USEVSIFRIQU4gRFNVLCBZT1UgUkVQUkVTRU5UIFRIQVQgWU9VIEhBVkUKRlVMRklMTEVEIEFOWSBSSUdIVCBPRiBSRVZJRVcgT1IgT1RIRVIgT0JMSUdBVElPTlMgUkVRVUlSRUQgQlkgU1VDSApDT05UUkFDVCBPUiBBR1JFRU1FTlQuCgpEU1Ugd2lsbCBjbGVhcmx5IGlkZW50aWZ5IHlvdXIgbmFtZShzKSBhcyB0aGUgYXV0aG9yKHMpIG9yIG93bmVyKHMpIG9mIHRoZQpzdWJtaXNzaW9uLCBhbmQgd2lsbCBub3QgbWFrZSBhbnkgYWx0ZXJhdGlvbiwgb3RoZXIgdGhhbiBhcyBhbGxvd2VkIGJ5IHRoaXMKbGljZW5zZSwgdG8geW91ciBzdWJtaXNzaW9uLgo=Repositório InstitucionalPUBhttps://repositorio.ufms.br/oai/requestri.prograd@ufms.bropendoar:21242021-09-30T19:56:45Repositório Institucional da UFMS - Universidade Federal de Mato Grosso do Sul (UFMS)false |
dc.title.pt_BR.fl_str_mv |
The circulation of human astrovirus genotypes in the Central West Region of Brazil |
title |
The circulation of human astrovirus genotypes in the Central West Region of Brazil |
spellingShingle |
The circulation of human astrovirus genotypes in the Central West Region of Brazil Silva, Paula Andreia Mamastrovirus Genótipo Genotype Brazil Nested-PCR |
title_short |
The circulation of human astrovirus genotypes in the Central West Region of Brazil |
title_full |
The circulation of human astrovirus genotypes in the Central West Region of Brazil |
title_fullStr |
The circulation of human astrovirus genotypes in the Central West Region of Brazil |
title_full_unstemmed |
The circulation of human astrovirus genotypes in the Central West Region of Brazil |
title_sort |
The circulation of human astrovirus genotypes in the Central West Region of Brazil |
author |
Silva, Paula Andreia |
author_facet |
Silva, Paula Andreia Santos, Rodrigo Alessandro Tôgo Costa, Paulo Sérgio Sucasas da Teixeira, José Marcus Sócrates Giugliano, Loreny Gimenes Andreasi, Márcia Sueli Assis Leite, José Paulo Gagliardi Schreier, Ecakart Cardoso, Divina das Dôres de Paula |
author_role |
author |
author2 |
Santos, Rodrigo Alessandro Tôgo Costa, Paulo Sérgio Sucasas da Teixeira, José Marcus Sócrates Giugliano, Loreny Gimenes Andreasi, Márcia Sueli Assis Leite, José Paulo Gagliardi Schreier, Ecakart Cardoso, Divina das Dôres de Paula |
author2_role |
author author author author author author author author |
dc.contributor.author.fl_str_mv |
Silva, Paula Andreia Santos, Rodrigo Alessandro Tôgo Costa, Paulo Sérgio Sucasas da Teixeira, José Marcus Sócrates Giugliano, Loreny Gimenes Andreasi, Márcia Sueli Assis Leite, José Paulo Gagliardi Schreier, Ecakart Cardoso, Divina das Dôres de Paula |
dc.subject.por.fl_str_mv |
Mamastrovirus Genótipo Genotype Brazil Nested-PCR |
topic |
Mamastrovirus Genótipo Genotype Brazil Nested-PCR |
description |
Out of 1,588 faecal samples of children taken from three locations of the Central West Region of Brazil, 57 were positive for astroviruses (HAstVs) using reverse transcription-polymerase chain reaction (RT-PCR). They were genotyped by nested RT-PCR and/or genomic sequencing. HAstV-1 (42.8%), HAstV-2 (23.2%), HAstV-3 (3.6%), HAstV-4 (14.3%) and HAstVs -5, -6, -7 and -8 (1.8% each) were detected. In Goiânia and Campo Grande, HAstV-1 was the most frequently detected genotype while in Brasília (DF) it was HAstV-2. Shifts in the circulation of astrovirus genotypes were observed in DF and Campo Grande. All samples collected by rectal swabs were viral negative. The astrovirus genotypes were detected in all age groups and there was no correlation between genotype and age group. |
publishDate |
2009 |
dc.date.issued.fl_str_mv |
2009 |
dc.date.accessioned.fl_str_mv |
2011-07-20T17:36:02Z |
dc.date.available.fl_str_mv |
2021-09-30T19:56:45Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
SILVA, Paula Andreia et al . The circulation of human astrovirus genotypes in the Central West Region of Brazil. Mem. Inst. Oswaldo Cruz, Rio de Janeiro, v. 104, n. 4, July 2009 . Available from <http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762009000400021&lng=en&nrm=iso>. access on 20 July 2011. doi: 10.1590/S0074-02762009000400021. |
dc.identifier.uri.fl_str_mv |
https://repositorio.ufms.br/handle/123456789/143 |
dc.identifier.doi.none.fl_str_mv |
10.1590/S0074-02762009000400021 |
identifier_str_mv |
SILVA, Paula Andreia et al . The circulation of human astrovirus genotypes in the Central West Region of Brazil. Mem. Inst. Oswaldo Cruz, Rio de Janeiro, v. 104, n. 4, July 2009 . Available from <http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0074-02762009000400021&lng=en&nrm=iso>. access on 20 July 2011. doi: 10.1590/S0074-02762009000400021. 10.1590/S0074-02762009000400021 |
url |
https://repositorio.ufms.br/handle/123456789/143 |
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eng |
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eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Memórias do Instituto Oswaldo Cruz |
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Memórias do Instituto Oswaldo Cruz |
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Universidade Federal de Mato Grosso do Sul (UFMS) |
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UFMS |
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UFMS |
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