An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in attention-deficit/hyperactivity disorder

Detalhes bibliográficos
Autor(a) principal: Lima, Leandro de Araújo
Data de Publicação: 2016
Outros Autores: Feio-dos-Santos, Ana Cecília, Belangero, Síntia Iole Nogueira, Gadelha, Ary, Bressan, Rodrigo Affonseca, Salum Junior, Giovanni Abrahão, Pan, Pedro Mario, Moriyama, Taís Silveira, Graeff-Martins, Ana Soledade, Tamanaha, Márcia, Alvarenga, Pedro Gomes de, Krieger, Fernanda Valle, Bilyk, Bacy Fleitlich, Jackowski, Andrea Parolin, Brietzke, Elisa Macedo, Sato, João Ricardo, Polanczyk, Guilherme Vanoni, Mari, Jair de Jesus, Manfro, Gisele Gus, Rosário, Maria Conceição do, Miguel, Eurípedes Constantino, Puga, Renato David, Tahira, Ana Carolina, Souza, Viviane Neri, Chile, Thais, Gouveia, Gisele Rodrigues, Simões, Sérgio Nery, Chang, Xiao, Pellegrino, Renata, Tian, Lifeng, Glessner, Joseph T., Hashimoto, Ronaldo Fumio, Rohde, Luis Augusto Paim, Sleiman, Patrick M.A., Hakonarson, Hakon, Brentani, Helena Paula
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/149756
Resumo: Many studies have attempted to investigate the genetic susceptibility of Attention-Deficit/ Hyperactivity Disorder (ADHD), but without much success. The present study aimed to analyze both single-nucleotide and copy-number variants contributing to the genetic architecture of ADHD. We generated exome data from 30 Brazilian trios with sporadic ADHD. We also analyzed a Brazilian sample of 503 children/adolescent controls from a High Risk Cohort Study for the Development of Childhood Psychiatric Disorders, and also previously published results of five CNV studies and one GWAS metaanalysis of ADHD involving children/adolescents. The results from the Brazilian trios showed that cases with de novo SNVs tend not to have de novo CNVs and vice-versa. Although the sample size is small, we could also see that various comorbidities are more frequent in cases with only inherited variants. Moreover, using only genes expressed in brain, we constructed two “in silico” protein-protein interaction networks, one with genes from any analysis, and other with genes with hits in two analyses. Topological and functional analyses of genes in this network uncovered genes related to synapse, cell adhesion, glutamatergic and serotoninergic pathways, both confirming findings of previous studies and capturing new genes and genetic variants in these pathways.
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spelling Lima, Leandro de AraújoFeio-dos-Santos, Ana CecíliaBelangero, Síntia Iole NogueiraGadelha, AryBressan, Rodrigo AffonsecaSalum Junior, Giovanni AbrahãoPan, Pedro MarioMoriyama, Taís SilveiraGraeff-Martins, Ana SoledadeTamanaha, MárciaAlvarenga, Pedro Gomes deKrieger, Fernanda ValleBilyk, Bacy FleitlichJackowski, Andrea ParolinBrietzke, Elisa MacedoSato, João RicardoPolanczyk, Guilherme VanoniMari, Jair de JesusManfro, Gisele GusRosário, Maria Conceição doMiguel, Eurípedes ConstantinoPuga, Renato DavidTahira, Ana CarolinaSouza, Viviane NeriChile, ThaisGouveia, Gisele RodriguesSimões, Sérgio NeryChang, XiaoPellegrino, RenataTian, LifengGlessner, Joseph T.Hashimoto, Ronaldo FumioRohde, Luis Augusto PaimSleiman, Patrick M.A.Hakonarson, HakonBrentani, Helena Paula2016-11-19T02:16:54Z20162045-2322http://hdl.handle.net/10183/149756000997215Many studies have attempted to investigate the genetic susceptibility of Attention-Deficit/ Hyperactivity Disorder (ADHD), but without much success. The present study aimed to analyze both single-nucleotide and copy-number variants contributing to the genetic architecture of ADHD. We generated exome data from 30 Brazilian trios with sporadic ADHD. We also analyzed a Brazilian sample of 503 children/adolescent controls from a High Risk Cohort Study for the Development of Childhood Psychiatric Disorders, and also previously published results of five CNV studies and one GWAS metaanalysis of ADHD involving children/adolescents. The results from the Brazilian trios showed that cases with de novo SNVs tend not to have de novo CNVs and vice-versa. Although the sample size is small, we could also see that various comorbidities are more frequent in cases with only inherited variants. Moreover, using only genes expressed in brain, we constructed two “in silico” protein-protein interaction networks, one with genes from any analysis, and other with genes with hits in two analyses. Topological and functional analyses of genes in this network uncovered genes related to synapse, cell adhesion, glutamatergic and serotoninergic pathways, both confirming findings of previous studies and capturing new genes and genetic variants in these pathways.application/pdfengScientific reports. London. Vol. 6 (Mar. 2016), 22851, [13] p.Transtorno do déficit de atenção com hiperatividadePolimorfismo de nucleotídeo únicoAn integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in attention-deficit/hyperactivity disorderEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT000997215.pdf.txt000997215.pdf.txtExtracted Texttext/plain64765http://www.lume.ufrgs.br/bitstream/10183/149756/3/000997215.pdf.txt86f5019d1886ea80c74a0db6ace6f145MD53000997215-02.pdf.txt000997215-02.pdf.txtExtracted Texttext/plain2906http://www.lume.ufrgs.br/bitstream/10183/149756/4/000997215-02.pdf.txt262707e3bc9d7424b74cc954ad0546c4MD54ORIGINAL000997215.pdf000997215.pdfTexto completo (inglês)application/pdf1615403http://www.lume.ufrgs.br/bitstream/10183/149756/1/000997215.pdf44b302413eef864187e348ee0521b04eMD51000997215-02.pdfErrataapplication/pdf128409http://www.lume.ufrgs.br/bitstream/10183/149756/2/000997215-02.pdfec914d80d88a9f23ee721fe037745e78MD5210183/1497562023-05-13 03:28:49.697741oai:www.lume.ufrgs.br:10183/149756Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2023-05-13T06:28:49Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in attention-deficit/hyperactivity disorder
title An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in attention-deficit/hyperactivity disorder
spellingShingle An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in attention-deficit/hyperactivity disorder
Lima, Leandro de Araújo
Transtorno do déficit de atenção com hiperatividade
Polimorfismo de nucleotídeo único
title_short An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in attention-deficit/hyperactivity disorder
title_full An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in attention-deficit/hyperactivity disorder
title_fullStr An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in attention-deficit/hyperactivity disorder
title_full_unstemmed An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in attention-deficit/hyperactivity disorder
title_sort An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in attention-deficit/hyperactivity disorder
author Lima, Leandro de Araújo
author_facet Lima, Leandro de Araújo
Feio-dos-Santos, Ana Cecília
Belangero, Síntia Iole Nogueira
Gadelha, Ary
Bressan, Rodrigo Affonseca
Salum Junior, Giovanni Abrahão
Pan, Pedro Mario
Moriyama, Taís Silveira
Graeff-Martins, Ana Soledade
Tamanaha, Márcia
Alvarenga, Pedro Gomes de
Krieger, Fernanda Valle
Bilyk, Bacy Fleitlich
Jackowski, Andrea Parolin
Brietzke, Elisa Macedo
Sato, João Ricardo
Polanczyk, Guilherme Vanoni
Mari, Jair de Jesus
Manfro, Gisele Gus
Rosário, Maria Conceição do
Miguel, Eurípedes Constantino
Puga, Renato David
Tahira, Ana Carolina
Souza, Viviane Neri
Chile, Thais
Gouveia, Gisele Rodrigues
Simões, Sérgio Nery
Chang, Xiao
Pellegrino, Renata
Tian, Lifeng
Glessner, Joseph T.
Hashimoto, Ronaldo Fumio
Rohde, Luis Augusto Paim
Sleiman, Patrick M.A.
Hakonarson, Hakon
Brentani, Helena Paula
author_role author
author2 Feio-dos-Santos, Ana Cecília
Belangero, Síntia Iole Nogueira
Gadelha, Ary
Bressan, Rodrigo Affonseca
Salum Junior, Giovanni Abrahão
Pan, Pedro Mario
Moriyama, Taís Silveira
Graeff-Martins, Ana Soledade
Tamanaha, Márcia
Alvarenga, Pedro Gomes de
Krieger, Fernanda Valle
Bilyk, Bacy Fleitlich
Jackowski, Andrea Parolin
Brietzke, Elisa Macedo
Sato, João Ricardo
Polanczyk, Guilherme Vanoni
Mari, Jair de Jesus
Manfro, Gisele Gus
Rosário, Maria Conceição do
Miguel, Eurípedes Constantino
Puga, Renato David
Tahira, Ana Carolina
Souza, Viviane Neri
Chile, Thais
Gouveia, Gisele Rodrigues
Simões, Sérgio Nery
Chang, Xiao
Pellegrino, Renata
Tian, Lifeng
Glessner, Joseph T.
Hashimoto, Ronaldo Fumio
Rohde, Luis Augusto Paim
Sleiman, Patrick M.A.
Hakonarson, Hakon
Brentani, Helena Paula
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Lima, Leandro de Araújo
Feio-dos-Santos, Ana Cecília
Belangero, Síntia Iole Nogueira
Gadelha, Ary
Bressan, Rodrigo Affonseca
Salum Junior, Giovanni Abrahão
Pan, Pedro Mario
Moriyama, Taís Silveira
Graeff-Martins, Ana Soledade
Tamanaha, Márcia
Alvarenga, Pedro Gomes de
Krieger, Fernanda Valle
Bilyk, Bacy Fleitlich
Jackowski, Andrea Parolin
Brietzke, Elisa Macedo
Sato, João Ricardo
Polanczyk, Guilherme Vanoni
Mari, Jair de Jesus
Manfro, Gisele Gus
Rosário, Maria Conceição do
Miguel, Eurípedes Constantino
Puga, Renato David
Tahira, Ana Carolina
Souza, Viviane Neri
Chile, Thais
Gouveia, Gisele Rodrigues
Simões, Sérgio Nery
Chang, Xiao
Pellegrino, Renata
Tian, Lifeng
Glessner, Joseph T.
Hashimoto, Ronaldo Fumio
Rohde, Luis Augusto Paim
Sleiman, Patrick M.A.
Hakonarson, Hakon
Brentani, Helena Paula
dc.subject.por.fl_str_mv Transtorno do déficit de atenção com hiperatividade
Polimorfismo de nucleotídeo único
topic Transtorno do déficit de atenção com hiperatividade
Polimorfismo de nucleotídeo único
description Many studies have attempted to investigate the genetic susceptibility of Attention-Deficit/ Hyperactivity Disorder (ADHD), but without much success. The present study aimed to analyze both single-nucleotide and copy-number variants contributing to the genetic architecture of ADHD. We generated exome data from 30 Brazilian trios with sporadic ADHD. We also analyzed a Brazilian sample of 503 children/adolescent controls from a High Risk Cohort Study for the Development of Childhood Psychiatric Disorders, and also previously published results of five CNV studies and one GWAS metaanalysis of ADHD involving children/adolescents. The results from the Brazilian trios showed that cases with de novo SNVs tend not to have de novo CNVs and vice-versa. Although the sample size is small, we could also see that various comorbidities are more frequent in cases with only inherited variants. Moreover, using only genes expressed in brain, we constructed two “in silico” protein-protein interaction networks, one with genes from any analysis, and other with genes with hits in two analyses. Topological and functional analyses of genes in this network uncovered genes related to synapse, cell adhesion, glutamatergic and serotoninergic pathways, both confirming findings of previous studies and capturing new genes and genetic variants in these pathways.
publishDate 2016
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dc.relation.ispartof.pt_BR.fl_str_mv Scientific reports. London. Vol. 6 (Mar. 2016), 22851, [13] p.
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