Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves

Detalhes bibliográficos
Autor(a) principal: Chacon, Daisy Sotero
Data de Publicação: 2021
Outros Autores: Torres, Taffarel Melo, Silva, Ivanice Bezerra da, Roque, Alan de Araújo, Reginaldo, Fernanda Priscila Santos, Costa, Cibele Tesser da, Vilasboa, Johnatan, Freire, Rafael Teixeira, Voigt, Eduardo Luiz, Zuanazzi, Jose Angelo Silveira, Santos, Renata Libonati dos, Rodrigues, Julia Abrantes, Santos, Filippe Lemos Maia, Scortecci, Katia Castanho, Lopes, Norberto Peporine, Ferreira, Leandro de Santis, Santos, Leandro Vieira dos, Cavalheiro, Alberto J., Fett Neto, Arthur Germano, Giordani, Raquel Brandt
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/249582
Resumo: Introduction: Natural products of pharmaceutical interest often do not reach the drug market due to the associated low yields and difficult extraction. Knowledge of biosynthetic pathways is a key element in the development of biotechnological strategies for plant specialized metabolite production. Erythrina species are mainly used as central nervous system depressants in folk medicine and are important sources of bioactive tetracyclic benzylisoquinoline alkaloids (BIAs), which can act on several pathology-related biological targets. Objectives: In this sense, in an unprecedented approach used with a non-model Fabaceae species grown in its unique arid natural habitat, a combined transcriptome and metabolome analyses (seeds and leaves) is presented. Methods: The Next Generation Sequencing-based transcriptome (de novo RNA sequencing) was carried out in a NextSeq 500 platform. Regarding metabolite profiling, the High-resolution Liquid Chromatography was coupled to DAD and a micrOTOF-QII mass spectrometer by using electrospray ionization (ESI) and Time of Flight (TOF) analyzer. The tandem MS/MS data were processed and analyzed through Molecular Networking approach. Results: This detailed macro and micromolecular approach applied to seeds and leaves of E. velutina revealed 42 alkaloids, several of them unique. Based on the combined evidence, 24 gene candidates were put together in a putative pathway leading to the singular alkaloid diversity of this species. Conclusion: Overall, these results could contribute by indicating potential biotechnological targets formodulation of erythrina alkaloids biosynthesis as well as improve molecular databases with omic data from a non-model medicinal plant, and reveal an interesting chemical diversity of Erythrina BIA harvested in Caatinga.
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spelling Chacon, Daisy SoteroTorres, Taffarel MeloSilva, Ivanice Bezerra daRoque, Alan de AraújoReginaldo, Fernanda Priscila SantosCosta, Cibele Tesser daVilasboa, JohnatanFreire, Rafael TeixeiraVoigt, Eduardo LuizZuanazzi, Jose Angelo SilveiraSantos, Renata Libonati dosRodrigues, Julia AbrantesSantos, Filippe Lemos MaiaScortecci, Katia CastanhoLopes, Norberto PeporineFerreira, Leandro de SantisSantos, Leandro Vieira dosCavalheiro, Alberto J.Fett Neto, Arthur GermanoGiordani, Raquel Brandt2022-10-03T04:48:48Z20212090-1232http://hdl.handle.net/10183/249582001144618Introduction: Natural products of pharmaceutical interest often do not reach the drug market due to the associated low yields and difficult extraction. Knowledge of biosynthetic pathways is a key element in the development of biotechnological strategies for plant specialized metabolite production. Erythrina species are mainly used as central nervous system depressants in folk medicine and are important sources of bioactive tetracyclic benzylisoquinoline alkaloids (BIAs), which can act on several pathology-related biological targets. Objectives: In this sense, in an unprecedented approach used with a non-model Fabaceae species grown in its unique arid natural habitat, a combined transcriptome and metabolome analyses (seeds and leaves) is presented. Methods: The Next Generation Sequencing-based transcriptome (de novo RNA sequencing) was carried out in a NextSeq 500 platform. Regarding metabolite profiling, the High-resolution Liquid Chromatography was coupled to DAD and a micrOTOF-QII mass spectrometer by using electrospray ionization (ESI) and Time of Flight (TOF) analyzer. The tandem MS/MS data were processed and analyzed through Molecular Networking approach. Results: This detailed macro and micromolecular approach applied to seeds and leaves of E. velutina revealed 42 alkaloids, several of them unique. Based on the combined evidence, 24 gene candidates were put together in a putative pathway leading to the singular alkaloid diversity of this species. Conclusion: Overall, these results could contribute by indicating potential biotechnological targets formodulation of erythrina alkaloids biosynthesis as well as improve molecular databases with omic data from a non-model medicinal plant, and reveal an interesting chemical diversity of Erythrina BIA harvested in Caatinga.application/pdfengJournal of advanced research. Cairo. Vol. 34 (Dec. 2021), p. 123-136TranscriptomaErythrina velutinaTranscriptomeTargeted metabolite profileBenzylisoquinoline AlkaloidsCaatingaErythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leavesEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001144618.pdf.txt001144618.pdf.txtExtracted Texttext/plain76468http://www.lume.ufrgs.br/bitstream/10183/249582/2/001144618.pdf.txt872aa61f21e8e3fb861c3c0ddcc46ed7MD52ORIGINAL001144618.pdfTexto completoapplication/pdf3286905http://www.lume.ufrgs.br/bitstream/10183/249582/1/001144618.pdf92bc1982b4ce67f2ef1741b50b782a44MD5110183/2495822022-10-04 05:01:25.518853oai:www.lume.ufrgs.br:10183/249582Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2022-10-04T08:01:25Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves
title Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves
spellingShingle Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves
Chacon, Daisy Sotero
Transcriptoma
Erythrina velutina
Transcriptome
Targeted metabolite profile
Benzylisoquinoline Alkaloids
Caatinga
title_short Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves
title_full Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves
title_fullStr Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves
title_full_unstemmed Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves
title_sort Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves
author Chacon, Daisy Sotero
author_facet Chacon, Daisy Sotero
Torres, Taffarel Melo
Silva, Ivanice Bezerra da
Roque, Alan de Araújo
Reginaldo, Fernanda Priscila Santos
Costa, Cibele Tesser da
Vilasboa, Johnatan
Freire, Rafael Teixeira
Voigt, Eduardo Luiz
Zuanazzi, Jose Angelo Silveira
Santos, Renata Libonati dos
Rodrigues, Julia Abrantes
Santos, Filippe Lemos Maia
Scortecci, Katia Castanho
Lopes, Norberto Peporine
Ferreira, Leandro de Santis
Santos, Leandro Vieira dos
Cavalheiro, Alberto J.
Fett Neto, Arthur Germano
Giordani, Raquel Brandt
author_role author
author2 Torres, Taffarel Melo
Silva, Ivanice Bezerra da
Roque, Alan de Araújo
Reginaldo, Fernanda Priscila Santos
Costa, Cibele Tesser da
Vilasboa, Johnatan
Freire, Rafael Teixeira
Voigt, Eduardo Luiz
Zuanazzi, Jose Angelo Silveira
Santos, Renata Libonati dos
Rodrigues, Julia Abrantes
Santos, Filippe Lemos Maia
Scortecci, Katia Castanho
Lopes, Norberto Peporine
Ferreira, Leandro de Santis
Santos, Leandro Vieira dos
Cavalheiro, Alberto J.
Fett Neto, Arthur Germano
Giordani, Raquel Brandt
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Chacon, Daisy Sotero
Torres, Taffarel Melo
Silva, Ivanice Bezerra da
Roque, Alan de Araújo
Reginaldo, Fernanda Priscila Santos
Costa, Cibele Tesser da
Vilasboa, Johnatan
Freire, Rafael Teixeira
Voigt, Eduardo Luiz
Zuanazzi, Jose Angelo Silveira
Santos, Renata Libonati dos
Rodrigues, Julia Abrantes
Santos, Filippe Lemos Maia
Scortecci, Katia Castanho
Lopes, Norberto Peporine
Ferreira, Leandro de Santis
Santos, Leandro Vieira dos
Cavalheiro, Alberto J.
Fett Neto, Arthur Germano
Giordani, Raquel Brandt
dc.subject.por.fl_str_mv Transcriptoma
topic Transcriptoma
Erythrina velutina
Transcriptome
Targeted metabolite profile
Benzylisoquinoline Alkaloids
Caatinga
dc.subject.eng.fl_str_mv Erythrina velutina
Transcriptome
Targeted metabolite profile
Benzylisoquinoline Alkaloids
Caatinga
description Introduction: Natural products of pharmaceutical interest often do not reach the drug market due to the associated low yields and difficult extraction. Knowledge of biosynthetic pathways is a key element in the development of biotechnological strategies for plant specialized metabolite production. Erythrina species are mainly used as central nervous system depressants in folk medicine and are important sources of bioactive tetracyclic benzylisoquinoline alkaloids (BIAs), which can act on several pathology-related biological targets. Objectives: In this sense, in an unprecedented approach used with a non-model Fabaceae species grown in its unique arid natural habitat, a combined transcriptome and metabolome analyses (seeds and leaves) is presented. Methods: The Next Generation Sequencing-based transcriptome (de novo RNA sequencing) was carried out in a NextSeq 500 platform. Regarding metabolite profiling, the High-resolution Liquid Chromatography was coupled to DAD and a micrOTOF-QII mass spectrometer by using electrospray ionization (ESI) and Time of Flight (TOF) analyzer. The tandem MS/MS data were processed and analyzed through Molecular Networking approach. Results: This detailed macro and micromolecular approach applied to seeds and leaves of E. velutina revealed 42 alkaloids, several of them unique. Based on the combined evidence, 24 gene candidates were put together in a putative pathway leading to the singular alkaloid diversity of this species. Conclusion: Overall, these results could contribute by indicating potential biotechnological targets formodulation of erythrina alkaloids biosynthesis as well as improve molecular databases with omic data from a non-model medicinal plant, and reveal an interesting chemical diversity of Erythrina BIA harvested in Caatinga.
publishDate 2021
dc.date.issued.fl_str_mv 2021
dc.date.accessioned.fl_str_mv 2022-10-03T04:48:48Z
dc.type.driver.fl_str_mv Estrangeiro
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dc.language.iso.fl_str_mv eng
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dc.relation.ispartof.pt_BR.fl_str_mv Journal of advanced research. Cairo. Vol. 34 (Dec. 2021), p. 123-136
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