Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFRGS |
Texto Completo: | http://hdl.handle.net/10183/249582 |
Resumo: | Introduction: Natural products of pharmaceutical interest often do not reach the drug market due to the associated low yields and difficult extraction. Knowledge of biosynthetic pathways is a key element in the development of biotechnological strategies for plant specialized metabolite production. Erythrina species are mainly used as central nervous system depressants in folk medicine and are important sources of bioactive tetracyclic benzylisoquinoline alkaloids (BIAs), which can act on several pathology-related biological targets. Objectives: In this sense, in an unprecedented approach used with a non-model Fabaceae species grown in its unique arid natural habitat, a combined transcriptome and metabolome analyses (seeds and leaves) is presented. Methods: The Next Generation Sequencing-based transcriptome (de novo RNA sequencing) was carried out in a NextSeq 500 platform. Regarding metabolite profiling, the High-resolution Liquid Chromatography was coupled to DAD and a micrOTOF-QII mass spectrometer by using electrospray ionization (ESI) and Time of Flight (TOF) analyzer. The tandem MS/MS data were processed and analyzed through Molecular Networking approach. Results: This detailed macro and micromolecular approach applied to seeds and leaves of E. velutina revealed 42 alkaloids, several of them unique. Based on the combined evidence, 24 gene candidates were put together in a putative pathway leading to the singular alkaloid diversity of this species. Conclusion: Overall, these results could contribute by indicating potential biotechnological targets formodulation of erythrina alkaloids biosynthesis as well as improve molecular databases with omic data from a non-model medicinal plant, and reveal an interesting chemical diversity of Erythrina BIA harvested in Caatinga. |
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Chacon, Daisy SoteroTorres, Taffarel MeloSilva, Ivanice Bezerra daRoque, Alan de AraújoReginaldo, Fernanda Priscila SantosCosta, Cibele Tesser daVilasboa, JohnatanFreire, Rafael TeixeiraVoigt, Eduardo LuizZuanazzi, Jose Angelo SilveiraSantos, Renata Libonati dosRodrigues, Julia AbrantesSantos, Filippe Lemos MaiaScortecci, Katia CastanhoLopes, Norberto PeporineFerreira, Leandro de SantisSantos, Leandro Vieira dosCavalheiro, Alberto J.Fett Neto, Arthur GermanoGiordani, Raquel Brandt2022-10-03T04:48:48Z20212090-1232http://hdl.handle.net/10183/249582001144618Introduction: Natural products of pharmaceutical interest often do not reach the drug market due to the associated low yields and difficult extraction. Knowledge of biosynthetic pathways is a key element in the development of biotechnological strategies for plant specialized metabolite production. Erythrina species are mainly used as central nervous system depressants in folk medicine and are important sources of bioactive tetracyclic benzylisoquinoline alkaloids (BIAs), which can act on several pathology-related biological targets. Objectives: In this sense, in an unprecedented approach used with a non-model Fabaceae species grown in its unique arid natural habitat, a combined transcriptome and metabolome analyses (seeds and leaves) is presented. Methods: The Next Generation Sequencing-based transcriptome (de novo RNA sequencing) was carried out in a NextSeq 500 platform. Regarding metabolite profiling, the High-resolution Liquid Chromatography was coupled to DAD and a micrOTOF-QII mass spectrometer by using electrospray ionization (ESI) and Time of Flight (TOF) analyzer. The tandem MS/MS data were processed and analyzed through Molecular Networking approach. Results: This detailed macro and micromolecular approach applied to seeds and leaves of E. velutina revealed 42 alkaloids, several of them unique. Based on the combined evidence, 24 gene candidates were put together in a putative pathway leading to the singular alkaloid diversity of this species. Conclusion: Overall, these results could contribute by indicating potential biotechnological targets formodulation of erythrina alkaloids biosynthesis as well as improve molecular databases with omic data from a non-model medicinal plant, and reveal an interesting chemical diversity of Erythrina BIA harvested in Caatinga.application/pdfengJournal of advanced research. Cairo. Vol. 34 (Dec. 2021), p. 123-136TranscriptomaErythrina velutinaTranscriptomeTargeted metabolite profileBenzylisoquinoline AlkaloidsCaatingaErythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leavesEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001144618.pdf.txt001144618.pdf.txtExtracted Texttext/plain76468http://www.lume.ufrgs.br/bitstream/10183/249582/2/001144618.pdf.txt872aa61f21e8e3fb861c3c0ddcc46ed7MD52ORIGINAL001144618.pdfTexto completoapplication/pdf3286905http://www.lume.ufrgs.br/bitstream/10183/249582/1/001144618.pdf92bc1982b4ce67f2ef1741b50b782a44MD5110183/2495822022-10-04 05:01:25.518853oai:www.lume.ufrgs.br:10183/249582Repositório InstitucionalPUBhttps://lume.ufrgs.br/oai/requestlume@ufrgs.bropendoar:2022-10-04T08:01:25Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false |
dc.title.pt_BR.fl_str_mv |
Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves |
title |
Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves |
spellingShingle |
Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves Chacon, Daisy Sotero Transcriptoma Erythrina velutina Transcriptome Targeted metabolite profile Benzylisoquinoline Alkaloids Caatinga |
title_short |
Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves |
title_full |
Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves |
title_fullStr |
Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves |
title_full_unstemmed |
Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves |
title_sort |
Erythrina velutina Willd. alkaloids : piecing biosynthesis together from transcriptome analysis and metabolite profiling of seeds and leaves |
author |
Chacon, Daisy Sotero |
author_facet |
Chacon, Daisy Sotero Torres, Taffarel Melo Silva, Ivanice Bezerra da Roque, Alan de Araújo Reginaldo, Fernanda Priscila Santos Costa, Cibele Tesser da Vilasboa, Johnatan Freire, Rafael Teixeira Voigt, Eduardo Luiz Zuanazzi, Jose Angelo Silveira Santos, Renata Libonati dos Rodrigues, Julia Abrantes Santos, Filippe Lemos Maia Scortecci, Katia Castanho Lopes, Norberto Peporine Ferreira, Leandro de Santis Santos, Leandro Vieira dos Cavalheiro, Alberto J. Fett Neto, Arthur Germano Giordani, Raquel Brandt |
author_role |
author |
author2 |
Torres, Taffarel Melo Silva, Ivanice Bezerra da Roque, Alan de Araújo Reginaldo, Fernanda Priscila Santos Costa, Cibele Tesser da Vilasboa, Johnatan Freire, Rafael Teixeira Voigt, Eduardo Luiz Zuanazzi, Jose Angelo Silveira Santos, Renata Libonati dos Rodrigues, Julia Abrantes Santos, Filippe Lemos Maia Scortecci, Katia Castanho Lopes, Norberto Peporine Ferreira, Leandro de Santis Santos, Leandro Vieira dos Cavalheiro, Alberto J. Fett Neto, Arthur Germano Giordani, Raquel Brandt |
author2_role |
author author author author author author author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Chacon, Daisy Sotero Torres, Taffarel Melo Silva, Ivanice Bezerra da Roque, Alan de Araújo Reginaldo, Fernanda Priscila Santos Costa, Cibele Tesser da Vilasboa, Johnatan Freire, Rafael Teixeira Voigt, Eduardo Luiz Zuanazzi, Jose Angelo Silveira Santos, Renata Libonati dos Rodrigues, Julia Abrantes Santos, Filippe Lemos Maia Scortecci, Katia Castanho Lopes, Norberto Peporine Ferreira, Leandro de Santis Santos, Leandro Vieira dos Cavalheiro, Alberto J. Fett Neto, Arthur Germano Giordani, Raquel Brandt |
dc.subject.por.fl_str_mv |
Transcriptoma |
topic |
Transcriptoma Erythrina velutina Transcriptome Targeted metabolite profile Benzylisoquinoline Alkaloids Caatinga |
dc.subject.eng.fl_str_mv |
Erythrina velutina Transcriptome Targeted metabolite profile Benzylisoquinoline Alkaloids Caatinga |
description |
Introduction: Natural products of pharmaceutical interest often do not reach the drug market due to the associated low yields and difficult extraction. Knowledge of biosynthetic pathways is a key element in the development of biotechnological strategies for plant specialized metabolite production. Erythrina species are mainly used as central nervous system depressants in folk medicine and are important sources of bioactive tetracyclic benzylisoquinoline alkaloids (BIAs), which can act on several pathology-related biological targets. Objectives: In this sense, in an unprecedented approach used with a non-model Fabaceae species grown in its unique arid natural habitat, a combined transcriptome and metabolome analyses (seeds and leaves) is presented. Methods: The Next Generation Sequencing-based transcriptome (de novo RNA sequencing) was carried out in a NextSeq 500 platform. Regarding metabolite profiling, the High-resolution Liquid Chromatography was coupled to DAD and a micrOTOF-QII mass spectrometer by using electrospray ionization (ESI) and Time of Flight (TOF) analyzer. The tandem MS/MS data were processed and analyzed through Molecular Networking approach. Results: This detailed macro and micromolecular approach applied to seeds and leaves of E. velutina revealed 42 alkaloids, several of them unique. Based on the combined evidence, 24 gene candidates were put together in a putative pathway leading to the singular alkaloid diversity of this species. Conclusion: Overall, these results could contribute by indicating potential biotechnological targets formodulation of erythrina alkaloids biosynthesis as well as improve molecular databases with omic data from a non-model medicinal plant, and reveal an interesting chemical diversity of Erythrina BIA harvested in Caatinga. |
publishDate |
2021 |
dc.date.issued.fl_str_mv |
2021 |
dc.date.accessioned.fl_str_mv |
2022-10-03T04:48:48Z |
dc.type.driver.fl_str_mv |
Estrangeiro info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
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publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10183/249582 |
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2090-1232 |
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001144618 |
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2090-1232 001144618 |
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http://hdl.handle.net/10183/249582 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.pt_BR.fl_str_mv |
Journal of advanced research. Cairo. Vol. 34 (Dec. 2021), p. 123-136 |
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openAccess |
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