The source of the river as a nursery for microbial diversity

Detalhes bibliográficos
Autor(a) principal: Oliveira, Luiz Felipe Valter de
Data de Publicação: 2015
Outros Autores: Margis, Rogerio
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/224356
Resumo: Bacteria are highly diverse and ubiquitous organisms that play a key role as drivers for ecosystem processes. The application of NGS (next-generation sequencing technologies) for 16S analysis has been broadly used for understanding bacterioplankton composition and structure. Most of studies conducted on aquatic ecosystems with 16S NGS have been in seawater and lakes. A few studies using NGS have been conducted in river environments and have suggested the presence of a bacterial seed-bank. We performed 16S highly variable V4 region high-throughput analysis in the Sinos River, which is located in one of most important Brazilian industrial centers. This region has several contrasts in its environmental characteristics, presenting a longitudinal gradient of eutrophication and making it a remarkable study site for observing the dynamics of bacterioplankton. We demonstrated consistent evidence for the existence of a bacterial seed-bank and its longitudinal persistence. Seasonal shifts reinforce the importance of the source of the river in maintaining the bacterial seed-bank that spreads throughout the river. Therefore, the preservation of the source of the river is important not only for hydrologic reasons but also to maintain the microbial composition and the ecological integrity of the river.
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spelling Oliveira, Luiz Felipe Valter deMargis, Rogerio2021-07-23T04:40:30Z20151932-6203http://hdl.handle.net/10183/224356000970434Bacteria are highly diverse and ubiquitous organisms that play a key role as drivers for ecosystem processes. The application of NGS (next-generation sequencing technologies) for 16S analysis has been broadly used for understanding bacterioplankton composition and structure. Most of studies conducted on aquatic ecosystems with 16S NGS have been in seawater and lakes. A few studies using NGS have been conducted in river environments and have suggested the presence of a bacterial seed-bank. We performed 16S highly variable V4 region high-throughput analysis in the Sinos River, which is located in one of most important Brazilian industrial centers. This region has several contrasts in its environmental characteristics, presenting a longitudinal gradient of eutrophication and making it a remarkable study site for observing the dynamics of bacterioplankton. We demonstrated consistent evidence for the existence of a bacterial seed-bank and its longitudinal persistence. Seasonal shifts reinforce the importance of the source of the river in maintaining the bacterial seed-bank that spreads throughout the river. Therefore, the preservation of the source of the river is important not only for hydrologic reasons but also to maintain the microbial composition and the ecological integrity of the river.application/pdfengPLoS ONE. San Francisco. Vol. 10, no. 3 (Mar. 2015), e0120608, 11 p.DiversidadeMicrobiologiaThe source of the river as a nursery for microbial diversityEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT000970434.pdf.txt000970434.pdf.txtExtracted Texttext/plain37653http://www.lume.ufrgs.br/bitstream/10183/224356/2/000970434.pdf.txt91418b847f76e3b99f266da6d3945f7fMD52ORIGINAL000970434.pdfTexto completo (inglês)application/pdf2651414http://www.lume.ufrgs.br/bitstream/10183/224356/1/000970434.pdf6ff68b1ce72b677496dcba4effa989eeMD5110183/2243562023-09-23 03:34:43.398749oai:www.lume.ufrgs.br:10183/224356Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2023-09-23T06:34:43Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv The source of the river as a nursery for microbial diversity
title The source of the river as a nursery for microbial diversity
spellingShingle The source of the river as a nursery for microbial diversity
Oliveira, Luiz Felipe Valter de
Diversidade
Microbiologia
title_short The source of the river as a nursery for microbial diversity
title_full The source of the river as a nursery for microbial diversity
title_fullStr The source of the river as a nursery for microbial diversity
title_full_unstemmed The source of the river as a nursery for microbial diversity
title_sort The source of the river as a nursery for microbial diversity
author Oliveira, Luiz Felipe Valter de
author_facet Oliveira, Luiz Felipe Valter de
Margis, Rogerio
author_role author
author2 Margis, Rogerio
author2_role author
dc.contributor.author.fl_str_mv Oliveira, Luiz Felipe Valter de
Margis, Rogerio
dc.subject.por.fl_str_mv Diversidade
Microbiologia
topic Diversidade
Microbiologia
description Bacteria are highly diverse and ubiquitous organisms that play a key role as drivers for ecosystem processes. The application of NGS (next-generation sequencing technologies) for 16S analysis has been broadly used for understanding bacterioplankton composition and structure. Most of studies conducted on aquatic ecosystems with 16S NGS have been in seawater and lakes. A few studies using NGS have been conducted in river environments and have suggested the presence of a bacterial seed-bank. We performed 16S highly variable V4 region high-throughput analysis in the Sinos River, which is located in one of most important Brazilian industrial centers. This region has several contrasts in its environmental characteristics, presenting a longitudinal gradient of eutrophication and making it a remarkable study site for observing the dynamics of bacterioplankton. We demonstrated consistent evidence for the existence of a bacterial seed-bank and its longitudinal persistence. Seasonal shifts reinforce the importance of the source of the river in maintaining the bacterial seed-bank that spreads throughout the river. Therefore, the preservation of the source of the river is important not only for hydrologic reasons but also to maintain the microbial composition and the ecological integrity of the river.
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dc.relation.ispartof.pt_BR.fl_str_mv PLoS ONE. San Francisco. Vol. 10, no. 3 (Mar. 2015), e0120608, 11 p.
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