Polymerase chain reaction as a useful and simple tool for rapid diagnosis of tuberculous meningitis in a brazilian tertiary care hospital

Detalhes bibliográficos
Autor(a) principal: Dora, José Miguel Silva
Data de Publicação: 2008
Outros Autores: Geib, Guilherme, Chakr, Rafael Mendonça da Silva, Paris, Fernanda de, Machado, Alice Beatriz Mombach Pinheiro, Lutz, Larissa, Souza, Carolina Fischinger Moura de, Goldani, Luciano Zubaran
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/37797
Resumo: Meningitis is a severe and potentially fatal form of tuberculosis. The diagnostic workup involves detection of acid-fast bacilli (AFB) in the cerebrospinal fluid (CSF) by microscopy or culture, however, the difficulty in detecting the organism poses a challenge to diagnosis. The use of the polymerase chain reaction (PCR) in the diagnostic approach to Mycobacterium tuberculosis (MTB) meningitis has been reported as a fast and accurate method, with several commercial kits available. As an alternative, some institutions have been developing inexpensive in house assays. In our institution, we use an in house PCR for tuberculosis. We analyzed the performance of our PCR for the diagnosis of MTB meningitis in 148 consecutive patients, using MTB culture as gold standard. The sensitivity and specificity of CSF PCR for the diagnosis of MTB meningitis was 50% and 98.6% respectively with a concordance with CSF mycobacterial culture of 96% (Kappa=0.52). In contrast to CSF cultures for MTB, our PCR test is a fast, simple and inexpensive tool to diagnose tuberculous meningitis with a performance similar to that obtained with the available commercial kits.
id UFRGS-2_f10ecb45ac11d8efc7a5e64f1eb002b5
oai_identifier_str oai:www.lume.ufrgs.br:10183/37797
network_acronym_str UFRGS-2
network_name_str Repositório Institucional da UFRGS
repository_id_str
spelling Dora, José Miguel SilvaGeib, GuilhermeChakr, Rafael Mendonça da SilvaParis, Fernanda deMachado, Alice Beatriz Mombach PinheiroLutz, LarissaSouza, Carolina Fischinger Moura deGoldani, Luciano Zubaran2012-03-23T01:20:44Z20081413-8670http://hdl.handle.net/10183/37797000719646Meningitis is a severe and potentially fatal form of tuberculosis. The diagnostic workup involves detection of acid-fast bacilli (AFB) in the cerebrospinal fluid (CSF) by microscopy or culture, however, the difficulty in detecting the organism poses a challenge to diagnosis. The use of the polymerase chain reaction (PCR) in the diagnostic approach to Mycobacterium tuberculosis (MTB) meningitis has been reported as a fast and accurate method, with several commercial kits available. As an alternative, some institutions have been developing inexpensive in house assays. In our institution, we use an in house PCR for tuberculosis. We analyzed the performance of our PCR for the diagnosis of MTB meningitis in 148 consecutive patients, using MTB culture as gold standard. The sensitivity and specificity of CSF PCR for the diagnosis of MTB meningitis was 50% and 98.6% respectively with a concordance with CSF mycobacterial culture of 96% (Kappa=0.52). In contrast to CSF cultures for MTB, our PCR test is a fast, simple and inexpensive tool to diagnose tuberculous meningitis with a performance similar to that obtained with the available commercial kits.application/pdfengThe Brazilian journal of infectious diseases. Vol. 12, no. 3 (Jun. 2008), p. 245-247Tuberculose meníngeaReação em cadeia da polimeraseMycobacterium tuberculosisBrasilTuberculous meningitisDiagnosisPolymerase chain reactionPCRMycobacterium tuberculosisPolymerase chain reaction as a useful and simple tool for rapid diagnosis of tuberculous meningitis in a brazilian tertiary care hospitalEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000719646.pdf000719646.pdfTexto completo (inglês)application/pdf31477http://www.lume.ufrgs.br/bitstream/10183/37797/1/000719646.pdf75cc8a046222fded7375e0ce8149d524MD51TEXT000719646.pdf.txt000719646.pdf.txtExtracted Texttext/plain12699http://www.lume.ufrgs.br/bitstream/10183/37797/2/000719646.pdf.txt047aeadbdda4fb48c325dd7b02976aa6MD52THUMBNAIL000719646.pdf.jpg000719646.pdf.jpgGenerated Thumbnailimage/jpeg1999http://www.lume.ufrgs.br/bitstream/10183/37797/3/000719646.pdf.jpg043afcea19e0fa3858aafdeb4496529fMD5310183/377972023-06-15 03:28:19.982184oai:www.lume.ufrgs.br:10183/37797Repositório InstitucionalPUBhttps://lume.ufrgs.br/oai/requestlume@ufrgs.bropendoar:2023-06-15T06:28:19Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Polymerase chain reaction as a useful and simple tool for rapid diagnosis of tuberculous meningitis in a brazilian tertiary care hospital
title Polymerase chain reaction as a useful and simple tool for rapid diagnosis of tuberculous meningitis in a brazilian tertiary care hospital
spellingShingle Polymerase chain reaction as a useful and simple tool for rapid diagnosis of tuberculous meningitis in a brazilian tertiary care hospital
Dora, José Miguel Silva
Tuberculose meníngea
Reação em cadeia da polimerase
Mycobacterium tuberculosis
Brasil
Tuberculous meningitis
Diagnosis
Polymerase chain reaction
PCR
Mycobacterium tuberculosis
title_short Polymerase chain reaction as a useful and simple tool for rapid diagnosis of tuberculous meningitis in a brazilian tertiary care hospital
title_full Polymerase chain reaction as a useful and simple tool for rapid diagnosis of tuberculous meningitis in a brazilian tertiary care hospital
title_fullStr Polymerase chain reaction as a useful and simple tool for rapid diagnosis of tuberculous meningitis in a brazilian tertiary care hospital
title_full_unstemmed Polymerase chain reaction as a useful and simple tool for rapid diagnosis of tuberculous meningitis in a brazilian tertiary care hospital
title_sort Polymerase chain reaction as a useful and simple tool for rapid diagnosis of tuberculous meningitis in a brazilian tertiary care hospital
author Dora, José Miguel Silva
author_facet Dora, José Miguel Silva
Geib, Guilherme
Chakr, Rafael Mendonça da Silva
Paris, Fernanda de
Machado, Alice Beatriz Mombach Pinheiro
Lutz, Larissa
Souza, Carolina Fischinger Moura de
Goldani, Luciano Zubaran
author_role author
author2 Geib, Guilherme
Chakr, Rafael Mendonça da Silva
Paris, Fernanda de
Machado, Alice Beatriz Mombach Pinheiro
Lutz, Larissa
Souza, Carolina Fischinger Moura de
Goldani, Luciano Zubaran
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Dora, José Miguel Silva
Geib, Guilherme
Chakr, Rafael Mendonça da Silva
Paris, Fernanda de
Machado, Alice Beatriz Mombach Pinheiro
Lutz, Larissa
Souza, Carolina Fischinger Moura de
Goldani, Luciano Zubaran
dc.subject.por.fl_str_mv Tuberculose meníngea
Reação em cadeia da polimerase
Mycobacterium tuberculosis
Brasil
topic Tuberculose meníngea
Reação em cadeia da polimerase
Mycobacterium tuberculosis
Brasil
Tuberculous meningitis
Diagnosis
Polymerase chain reaction
PCR
Mycobacterium tuberculosis
dc.subject.eng.fl_str_mv Tuberculous meningitis
Diagnosis
Polymerase chain reaction
PCR
Mycobacterium tuberculosis
description Meningitis is a severe and potentially fatal form of tuberculosis. The diagnostic workup involves detection of acid-fast bacilli (AFB) in the cerebrospinal fluid (CSF) by microscopy or culture, however, the difficulty in detecting the organism poses a challenge to diagnosis. The use of the polymerase chain reaction (PCR) in the diagnostic approach to Mycobacterium tuberculosis (MTB) meningitis has been reported as a fast and accurate method, with several commercial kits available. As an alternative, some institutions have been developing inexpensive in house assays. In our institution, we use an in house PCR for tuberculosis. We analyzed the performance of our PCR for the diagnosis of MTB meningitis in 148 consecutive patients, using MTB culture as gold standard. The sensitivity and specificity of CSF PCR for the diagnosis of MTB meningitis was 50% and 98.6% respectively with a concordance with CSF mycobacterial culture of 96% (Kappa=0.52). In contrast to CSF cultures for MTB, our PCR test is a fast, simple and inexpensive tool to diagnose tuberculous meningitis with a performance similar to that obtained with the available commercial kits.
publishDate 2008
dc.date.issued.fl_str_mv 2008
dc.date.accessioned.fl_str_mv 2012-03-23T01:20:44Z
dc.type.driver.fl_str_mv Estrangeiro
info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10183/37797
dc.identifier.issn.pt_BR.fl_str_mv 1413-8670
dc.identifier.nrb.pt_BR.fl_str_mv 000719646
identifier_str_mv 1413-8670
000719646
url http://hdl.handle.net/10183/37797
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv The Brazilian journal of infectious diseases. Vol. 12, no. 3 (Jun. 2008), p. 245-247
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFRGS
instname:Universidade Federal do Rio Grande do Sul (UFRGS)
instacron:UFRGS
instname_str Universidade Federal do Rio Grande do Sul (UFRGS)
instacron_str UFRGS
institution UFRGS
reponame_str Repositório Institucional da UFRGS
collection Repositório Institucional da UFRGS
bitstream.url.fl_str_mv http://www.lume.ufrgs.br/bitstream/10183/37797/1/000719646.pdf
http://www.lume.ufrgs.br/bitstream/10183/37797/2/000719646.pdf.txt
http://www.lume.ufrgs.br/bitstream/10183/37797/3/000719646.pdf.jpg
bitstream.checksum.fl_str_mv 75cc8a046222fded7375e0ce8149d524
047aeadbdda4fb48c325dd7b02976aa6
043afcea19e0fa3858aafdeb4496529f
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
repository.name.fl_str_mv Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)
repository.mail.fl_str_mv lume@ufrgs.br
_version_ 1817724838685442048