Planejamento in silico de inibidores da enzima dihidrofolato redutase

Detalhes bibliográficos
Autor(a) principal: Matos, Isaac de Araujo
Data de Publicação: 2016
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFS
Texto Completo: https://ri.ufs.br/handle/riufs/5358
Resumo: Inhibition of the folate metabolism is an important strategy in the treatment of infectious diseases. In the folate metabolism, the dihydrofolate reductase (DHFR) catalyses the reduction of dihydrofolate to tetrahydrofolate. This metabolite is essential for the synthesis of DNA and proteins. Therefore, developing new dihydrofolate reductase antagonist has been considered as a good strategy to improve infectious diseases treatment. In this work, a quantitative study of structure-activity relationship of 17 diaminonazolines inhibitors of the Staphylococcus aureus DHFR (SaDHFR), were performed by using multiple linear regression. Seven inhibitors, not included in the training group, were used to validate the QSAR model. In addition, molecular docking was used to study molecular recognition between SaDHFR and diaminoquinazolines derivatives. Moreover, theoretical pharmacokinetics and toxicological profile was determined for the most potent ligands. The molecular docking study suggest that hydrophobic interactions between the ligand and the residues Ile51, Phe93, Leu55, Val32 and Leu29, are important for potency. The model of QSAR generated values of R2 training, Q2 and R2 pred equal to 0.90, 0.90 and 0.65, respectively. The descriptors included in the model, indicate the importance of pKa and molar refractivity biological activity. The analogs 28A-12, 28A-13 e 28A- 21 exhibit a favorable theoretical pharmacodynamics, pharmacokinetics and toxicological profile. The results obtained for different computational approaches, may be useful in design of new antimicrobial drugs more potent and with few side effects.
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spelling Matos, Isaac de AraujoCosta Júnior, Nivan Bezerra dahttp://lattes.cnpq.br/81886957243844492017-09-26T18:27:39Z2017-09-26T18:27:39Z2016-02-29Matos, Isaac de Araujo. Planejamento in silico de inibidores da enzima dihidrofolato redutase. 2016. 138 f. Dissertação (Pós-Graduação em Química) - Universidade Federal de Sergipe, São Cristóvão, 2016.https://ri.ufs.br/handle/riufs/5358Inhibition of the folate metabolism is an important strategy in the treatment of infectious diseases. In the folate metabolism, the dihydrofolate reductase (DHFR) catalyses the reduction of dihydrofolate to tetrahydrofolate. This metabolite is essential for the synthesis of DNA and proteins. Therefore, developing new dihydrofolate reductase antagonist has been considered as a good strategy to improve infectious diseases treatment. In this work, a quantitative study of structure-activity relationship of 17 diaminonazolines inhibitors of the Staphylococcus aureus DHFR (SaDHFR), were performed by using multiple linear regression. Seven inhibitors, not included in the training group, were used to validate the QSAR model. In addition, molecular docking was used to study molecular recognition between SaDHFR and diaminoquinazolines derivatives. Moreover, theoretical pharmacokinetics and toxicological profile was determined for the most potent ligands. The molecular docking study suggest that hydrophobic interactions between the ligand and the residues Ile51, Phe93, Leu55, Val32 and Leu29, are important for potency. The model of QSAR generated values of R2 training, Q2 and R2 pred equal to 0.90, 0.90 and 0.65, respectively. The descriptors included in the model, indicate the importance of pKa and molar refractivity biological activity. The analogs 28A-12, 28A-13 e 28A- 21 exhibit a favorable theoretical pharmacodynamics, pharmacokinetics and toxicological profile. The results obtained for different computational approaches, may be useful in design of new antimicrobial drugs more potent and with few side effects.A inibição do metabolismo do folato é uma importante estratégia no tratamento de doenças infecciosas. No metabolismo do folato, a enzima diidrofolato redutase (DHFR) catalisa a redução do diidrofolato a tetraidrofolato. Este metabólito é essencial para a biossíntese de DNA e proteínas. Portanto, o desenvolvimento de novos antagonistas da diidrofolato redutase tem sido considerado como uma boa estratégia para melhorar o tratamento das doenças infecciosas. No presente trabalho, foi desenvolvido uma relação estruturaatividade a partir de 17 diaminoquinazolinas inibidoras da DHFR do Staphylococcus aureus (SaDHFR) empregando para isso, a regressão linear múltipla. Sete inibidores, não incluídos no grupo treino foram usados para validar o modelo de QSAR. Em adição, docagem molecular foi empregada para avaliar o reconhecimento molecular entre a SaDHFR e a série de diaminoquinazolinas. Além disso, os perfis farmacocinéticos e toxicológicos teóricos foram avaliados para os ligantes mais potentes. Os resultados obtidos por docagem molecular sugerem que as interações hidrofóbicas entre os ligantes e os resíduos Ile51, Phe93, Leu55, Val32 e Leu29, são importantes para a potência dos ligantes. O modelo de QSAR desenvolvido apresentou valores de R2treino, Q2 e R2pred igual a 0.90, 0.90 e 0.65, respectivamente. Os descritores incluídos no modelo, indicam a importância do pKa e da refratividade para a atividade biológica. Os análogos 28A-12, 28A-13 e 28A-21 exibem um perfil farmacodinâmico, farmacocinético e toxicológico favorável. Os resultados obtidos por meio de diferentes abordagens computacionais podem ser úteis no planejamento de novos fármacos antimicrobianos mais potentes e com menos efeitos colaterais.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESapplication/pdfporUniversidade Federal de SergipePós-Graduação em QuímicaUFSBrasilQuímicaInibidoresDiidrofolato redutaseStaphylococcus aureusDiaminoquinazolinasDocagem molecularMetabolismo do folatoCIENCIAS EXATAS E DA TERRA::QUIMICAPlanejamento in silico de inibidores da enzima dihidrofolato redutaseDrug design in silico of dihydrofolate reductase inhibitorsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFSinstname:Universidade Federal de Sergipe (UFS)instacron:UFSORIGINALISAAC_ARAUJO_MATOS.pdfapplication/pdf5356474https://ri.ufs.br/jspui/bitstream/riufs/5358/1/ISAAC_ARAUJO_MATOS.pdf035e502b6e013750f41113031ccf5fcdMD51TEXTISAAC_ARAUJO_MATOS.pdf.txtISAAC_ARAUJO_MATOS.pdf.txtExtracted texttext/plain216973https://ri.ufs.br/jspui/bitstream/riufs/5358/2/ISAAC_ARAUJO_MATOS.pdf.txt323afae094f4d0f15fb7158e4ce1d343MD52THUMBNAILISAAC_ARAUJO_MATOS.pdf.jpgISAAC_ARAUJO_MATOS.pdf.jpgGenerated Thumbnailimage/jpeg1486https://ri.ufs.br/jspui/bitstream/riufs/5358/3/ISAAC_ARAUJO_MATOS.pdf.jpgcda4b03580938a3be1cf5b18ed3e94e7MD53riufs/53582018-01-16 19:59:29.803oai:ufs.br:riufs/5358Repositório InstitucionalPUBhttps://ri.ufs.br/oai/requestrepositorio@academico.ufs.bropendoar:2018-01-16T22:59:29Repositório Institucional da UFS - Universidade Federal de Sergipe (UFS)false
dc.title.por.fl_str_mv Planejamento in silico de inibidores da enzima dihidrofolato redutase
dc.title.alternative.eng.fl_str_mv Drug design in silico of dihydrofolate reductase inhibitors
title Planejamento in silico de inibidores da enzima dihidrofolato redutase
spellingShingle Planejamento in silico de inibidores da enzima dihidrofolato redutase
Matos, Isaac de Araujo
Química
Inibidores
Diidrofolato redutase
Staphylococcus aureus
Diaminoquinazolinas
Docagem molecular
Metabolismo do folato
CIENCIAS EXATAS E DA TERRA::QUIMICA
title_short Planejamento in silico de inibidores da enzima dihidrofolato redutase
title_full Planejamento in silico de inibidores da enzima dihidrofolato redutase
title_fullStr Planejamento in silico de inibidores da enzima dihidrofolato redutase
title_full_unstemmed Planejamento in silico de inibidores da enzima dihidrofolato redutase
title_sort Planejamento in silico de inibidores da enzima dihidrofolato redutase
author Matos, Isaac de Araujo
author_facet Matos, Isaac de Araujo
author_role author
dc.contributor.author.fl_str_mv Matos, Isaac de Araujo
dc.contributor.advisor1.fl_str_mv Costa Júnior, Nivan Bezerra da
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/8188695724384449
contributor_str_mv Costa Júnior, Nivan Bezerra da
dc.subject.por.fl_str_mv Química
Inibidores
Diidrofolato redutase
Staphylococcus aureus
Diaminoquinazolinas
Docagem molecular
Metabolismo do folato
topic Química
Inibidores
Diidrofolato redutase
Staphylococcus aureus
Diaminoquinazolinas
Docagem molecular
Metabolismo do folato
CIENCIAS EXATAS E DA TERRA::QUIMICA
dc.subject.cnpq.fl_str_mv CIENCIAS EXATAS E DA TERRA::QUIMICA
description Inhibition of the folate metabolism is an important strategy in the treatment of infectious diseases. In the folate metabolism, the dihydrofolate reductase (DHFR) catalyses the reduction of dihydrofolate to tetrahydrofolate. This metabolite is essential for the synthesis of DNA and proteins. Therefore, developing new dihydrofolate reductase antagonist has been considered as a good strategy to improve infectious diseases treatment. In this work, a quantitative study of structure-activity relationship of 17 diaminonazolines inhibitors of the Staphylococcus aureus DHFR (SaDHFR), were performed by using multiple linear regression. Seven inhibitors, not included in the training group, were used to validate the QSAR model. In addition, molecular docking was used to study molecular recognition between SaDHFR and diaminoquinazolines derivatives. Moreover, theoretical pharmacokinetics and toxicological profile was determined for the most potent ligands. The molecular docking study suggest that hydrophobic interactions between the ligand and the residues Ile51, Phe93, Leu55, Val32 and Leu29, are important for potency. The model of QSAR generated values of R2 training, Q2 and R2 pred equal to 0.90, 0.90 and 0.65, respectively. The descriptors included in the model, indicate the importance of pKa and molar refractivity biological activity. The analogs 28A-12, 28A-13 e 28A- 21 exhibit a favorable theoretical pharmacodynamics, pharmacokinetics and toxicological profile. The results obtained for different computational approaches, may be useful in design of new antimicrobial drugs more potent and with few side effects.
publishDate 2016
dc.date.issued.fl_str_mv 2016-02-29
dc.date.accessioned.fl_str_mv 2017-09-26T18:27:39Z
dc.date.available.fl_str_mv 2017-09-26T18:27:39Z
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dc.identifier.citation.fl_str_mv Matos, Isaac de Araujo. Planejamento in silico de inibidores da enzima dihidrofolato redutase. 2016. 138 f. Dissertação (Pós-Graduação em Química) - Universidade Federal de Sergipe, São Cristóvão, 2016.
dc.identifier.uri.fl_str_mv https://ri.ufs.br/handle/riufs/5358
identifier_str_mv Matos, Isaac de Araujo. Planejamento in silico de inibidores da enzima dihidrofolato redutase. 2016. 138 f. Dissertação (Pós-Graduação em Química) - Universidade Federal de Sergipe, São Cristóvão, 2016.
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