Neonatal screening for severe combined immunodeficiency in Brazil

Detalhes bibliográficos
Autor(a) principal: Patto Kanegae, Marilia Pyles
Data de Publicação: 2016
Outros Autores: Barreiros, Lucila Akune, Lessa Mazzucchelli, Juliana Themudo [UNIFESP], Hadachi, Sonia Marchezi, de Figueiredo Ferreira Guilhoto, Laura Maria, Acquesta, Ana Lucia, Genov, Isabel Rugue [UNIFESP], Holanda, Silvia Maia, Watanabe Di Gesu, Regina Sumiko, Goulart, Ana Lucia [UNIFESP], Nunes dos Santos, Amelia Miyashiro [UNIFESP], Bellesi, Newton, Costa-Carvalho, Beatriz Tavares [UNIFESP], Condino-Neto, Antonio
Tipo de documento: Artigo
Idioma: eng
por
Título da fonte: Repositório Institucional da UNIFESP
Texto Completo: http://dx.doi.org/10.1016/j.jped.2015.10.006
https://repositorio.unifesp.br/handle/11600/57601
Resumo: Objective: To apply, in Brazil, the T-cell receptor excision circles (TRECs) quantification technique using real-time polymerase chain reaction in newborn screening for severe combined immunodeficiency and assess the feasibility of implementing it on a large scale in Brazil. Methods: 8715 newborn blood samples were collected on filter paper and, after DNA elution, TRECs were quantified by real-time polymerase chain reaction. The cutoff value to determine whether a sample was abnormal was determined by ROC curve analysis, using SSPS. Results: The concentration of TRECs in 8,682 samples ranged from 2 to 2,181 TRECs/mu L of blood, with mean and median of 324 and 259 TRECs/mu L, respectively. Forty-nine (0.56%) samples were below the cutoff (30 TRECs/mu L) and were reanalyzed. Four (0.05%) samples had abnormal results (between 16 and 29 TRECs/mu L). Samples from patients previously identified as having severe combined immunodeficiency or DiGeorge syndrome were used to validate the assay and all of them showed TRECs below the cutoff. Preterm infants had lower levels of TRECs than full-term neonates. The ROC curve showed a cutoff of 26 TRECs/mu L, with 100% sensitivity for detecting severe combined immunodeficiency. Using this value, retest and referral rates were 0.43% (37 samples) and 0.03% (3 samples), respectively. Conclusion: The technique is reliable and can be applied on a large scale after the training of technical teams throughout Brazil. (C) 2016 Published by Elsevier Editora Ltda. on behalf of Sociedade Brasileira de Pediatria. This is an open access article under the CC BY-NC-ND license.
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spelling Neonatal screening for severe combined immunodeficiency in BrazilTriagem neonatal para imunodeficiência combinada grave no BrasilSCIDNeonatal screeningTRECsT lymphocytesCombined immunodeficiencyPrimary immunodeficiencySCIDTriagem neonatalTRECsLinfócitos TImunodeficiência combinadaImunodeficiência primáriaObjective: To apply, in Brazil, the T-cell receptor excision circles (TRECs) quantification technique using real-time polymerase chain reaction in newborn screening for severe combined immunodeficiency and assess the feasibility of implementing it on a large scale in Brazil. Methods: 8715 newborn blood samples were collected on filter paper and, after DNA elution, TRECs were quantified by real-time polymerase chain reaction. The cutoff value to determine whether a sample was abnormal was determined by ROC curve analysis, using SSPS. Results: The concentration of TRECs in 8,682 samples ranged from 2 to 2,181 TRECs/mu L of blood, with mean and median of 324 and 259 TRECs/mu L, respectively. Forty-nine (0.56%) samples were below the cutoff (30 TRECs/mu L) and were reanalyzed. Four (0.05%) samples had abnormal results (between 16 and 29 TRECs/mu L). Samples from patients previously identified as having severe combined immunodeficiency or DiGeorge syndrome were used to validate the assay and all of them showed TRECs below the cutoff. Preterm infants had lower levels of TRECs than full-term neonates. The ROC curve showed a cutoff of 26 TRECs/mu L, with 100% sensitivity for detecting severe combined immunodeficiency. Using this value, retest and referral rates were 0.43% (37 samples) and 0.03% (3 samples), respectively. Conclusion: The technique is reliable and can be applied on a large scale after the training of technical teams throughout Brazil. (C) 2016 Published by Elsevier Editora Ltda. on behalf of Sociedade Brasileira de Pediatria. This is an open access article under the CC BY-NC-ND license.Objetivo: Aplicar no Brasil a técnica de quantificação de T-cell Receptor Excision Circles (TRECs) por PCR em tempo real para triagem neonatal de imunodeficiência combinada grave (SCID) e avaliar se é possível fazê-la em grande escala em nosso país. Métodos: Foram coletadas em papel filtro 8.715 amostras de sangue de recém-nascidos e, após eluição do DNA, os TRECs foram quantificados por PCR em tempo real. O valor de corte para determinar se uma amostra é anormal foi determinado pela análise de curva ROC com o programa SSPS. Resultados: A concentração de TRECs em 8.682 amostras analisadas variou entre 2 e 2.181 TRECs/µL de sangue, com média e mediana de 324 e 259 TRECs/µL, respectivamente. Das amostras, 49 (0,56%) ficaram abaixo do valor de corte (30 TRECs/µL) e foram requantificadas. Quatro (0,05%) mantiveram resultados anormais (entre 16 e 29 TRECs/µL). Amostras de pacientes com diagnóstico clínico prévio de SCID e síndrome de DiGeorge foram usadas para validar o ensaio e todas apresentaram concentração de TRECs abaixo do valor de corte. Recém-nascidos prematuros apresentaram menores níveis de TRECs comparados com os nascidos a termo. Com o uso da curva ROC em nossos dados, chegamos ao valor de corte de 26 TRECs/µL, com sensibilidade de 100% para detecção de SCID. Com o uso desse valor, as taxas de repetição e encaminhamento ficaram em 0,43% (37 amostras) e 0,03% (3 amostras), respectivamente. Conclusão: A técnica é factível e pode ser implantada em grande escala, após treinamento técnico das equipes envolvidas.Univ Sao Paulo, Inst Ciencias Biomed, Dept Immunol, Sao Paulo, SP, BrazilUniv Fed Sao Paulo UNIFESP, Dept Pediat, Sao Paulo, SP, BrazilAPAE SP, Sao Paulo, SP, BrazilHosp Geral Pirajussara, Sao Paulo, SP, BrazilHosp Pimentas Bonsucesso, Guarulhos, SP, BrazilAmparo Maternal, Sao Paulo, SP, BrazilHosp Nossa Senhora Conceicao, Porto Alegre, RS, BrazilClin Med Prevent Para CLIMEP, Belem, Para, BrazilUniv Fed Sao Paulo UNIFESP, Dept Pediat, Sao Paulo, SP, BrazilWeb of ScienceFAPESPCNPqBaxter BioscienceSoc Brasil Pediatria2020-08-14T13:44:20Z2020-08-14T13:44:20Z2016info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion374-380application/pdfapplication/pdfhttp://dx.doi.org/10.1016/j.jped.2015.10.006Jornal De Pediatria. Rio De Janeiro, Rj, v. 92, n. 4, p. 374-380, 2016.10.1016/j.jped.2015.10.006S0021-75572016000500374-en.pdfS0021-75572016000500374-pt.pdf0021-7557S0021-75572016000500374https://repositorio.unifesp.br/handle/11600/57601WOS:000385025000008engporJornal De PediatriaRio De Janeiro, Rjinfo:eu-repo/semantics/openAccessPatto Kanegae, Marilia PylesBarreiros, Lucila AkuneLessa Mazzucchelli, Juliana Themudo [UNIFESP]Hadachi, Sonia Marchezide Figueiredo Ferreira Guilhoto, Laura MariaAcquesta, Ana LuciaGenov, Isabel Rugue [UNIFESP]Holanda, Silvia MaiaWatanabe Di Gesu, Regina SumikoGoulart, Ana Lucia [UNIFESP]Nunes dos Santos, Amelia Miyashiro [UNIFESP]Bellesi, NewtonCosta-Carvalho, Beatriz Tavares [UNIFESP]Condino-Neto, Antonioreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2024-08-08T22:52:47Zoai:repositorio.unifesp.br/:11600/57601Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652024-08-08T22:52:47Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.none.fl_str_mv Neonatal screening for severe combined immunodeficiency in Brazil
Triagem neonatal para imunodeficiência combinada grave no Brasil
title Neonatal screening for severe combined immunodeficiency in Brazil
spellingShingle Neonatal screening for severe combined immunodeficiency in Brazil
Patto Kanegae, Marilia Pyles
SCID
Neonatal screening
TRECs
T lymphocytes
Combined immunodeficiency
Primary immunodeficiency
SCID
Triagem neonatal
TRECs
Linfócitos T
Imunodeficiência combinada
Imunodeficiência primária
title_short Neonatal screening for severe combined immunodeficiency in Brazil
title_full Neonatal screening for severe combined immunodeficiency in Brazil
title_fullStr Neonatal screening for severe combined immunodeficiency in Brazil
title_full_unstemmed Neonatal screening for severe combined immunodeficiency in Brazil
title_sort Neonatal screening for severe combined immunodeficiency in Brazil
author Patto Kanegae, Marilia Pyles
author_facet Patto Kanegae, Marilia Pyles
Barreiros, Lucila Akune
Lessa Mazzucchelli, Juliana Themudo [UNIFESP]
Hadachi, Sonia Marchezi
de Figueiredo Ferreira Guilhoto, Laura Maria
Acquesta, Ana Lucia
Genov, Isabel Rugue [UNIFESP]
Holanda, Silvia Maia
Watanabe Di Gesu, Regina Sumiko
Goulart, Ana Lucia [UNIFESP]
Nunes dos Santos, Amelia Miyashiro [UNIFESP]
Bellesi, Newton
Costa-Carvalho, Beatriz Tavares [UNIFESP]
Condino-Neto, Antonio
author_role author
author2 Barreiros, Lucila Akune
Lessa Mazzucchelli, Juliana Themudo [UNIFESP]
Hadachi, Sonia Marchezi
de Figueiredo Ferreira Guilhoto, Laura Maria
Acquesta, Ana Lucia
Genov, Isabel Rugue [UNIFESP]
Holanda, Silvia Maia
Watanabe Di Gesu, Regina Sumiko
Goulart, Ana Lucia [UNIFESP]
Nunes dos Santos, Amelia Miyashiro [UNIFESP]
Bellesi, Newton
Costa-Carvalho, Beatriz Tavares [UNIFESP]
Condino-Neto, Antonio
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Patto Kanegae, Marilia Pyles
Barreiros, Lucila Akune
Lessa Mazzucchelli, Juliana Themudo [UNIFESP]
Hadachi, Sonia Marchezi
de Figueiredo Ferreira Guilhoto, Laura Maria
Acquesta, Ana Lucia
Genov, Isabel Rugue [UNIFESP]
Holanda, Silvia Maia
Watanabe Di Gesu, Regina Sumiko
Goulart, Ana Lucia [UNIFESP]
Nunes dos Santos, Amelia Miyashiro [UNIFESP]
Bellesi, Newton
Costa-Carvalho, Beatriz Tavares [UNIFESP]
Condino-Neto, Antonio
dc.subject.por.fl_str_mv SCID
Neonatal screening
TRECs
T lymphocytes
Combined immunodeficiency
Primary immunodeficiency
SCID
Triagem neonatal
TRECs
Linfócitos T
Imunodeficiência combinada
Imunodeficiência primária
topic SCID
Neonatal screening
TRECs
T lymphocytes
Combined immunodeficiency
Primary immunodeficiency
SCID
Triagem neonatal
TRECs
Linfócitos T
Imunodeficiência combinada
Imunodeficiência primária
description Objective: To apply, in Brazil, the T-cell receptor excision circles (TRECs) quantification technique using real-time polymerase chain reaction in newborn screening for severe combined immunodeficiency and assess the feasibility of implementing it on a large scale in Brazil. Methods: 8715 newborn blood samples were collected on filter paper and, after DNA elution, TRECs were quantified by real-time polymerase chain reaction. The cutoff value to determine whether a sample was abnormal was determined by ROC curve analysis, using SSPS. Results: The concentration of TRECs in 8,682 samples ranged from 2 to 2,181 TRECs/mu L of blood, with mean and median of 324 and 259 TRECs/mu L, respectively. Forty-nine (0.56%) samples were below the cutoff (30 TRECs/mu L) and were reanalyzed. Four (0.05%) samples had abnormal results (between 16 and 29 TRECs/mu L). Samples from patients previously identified as having severe combined immunodeficiency or DiGeorge syndrome were used to validate the assay and all of them showed TRECs below the cutoff. Preterm infants had lower levels of TRECs than full-term neonates. The ROC curve showed a cutoff of 26 TRECs/mu L, with 100% sensitivity for detecting severe combined immunodeficiency. Using this value, retest and referral rates were 0.43% (37 samples) and 0.03% (3 samples), respectively. Conclusion: The technique is reliable and can be applied on a large scale after the training of technical teams throughout Brazil. (C) 2016 Published by Elsevier Editora Ltda. on behalf of Sociedade Brasileira de Pediatria. This is an open access article under the CC BY-NC-ND license.
publishDate 2016
dc.date.none.fl_str_mv 2016
2020-08-14T13:44:20Z
2020-08-14T13:44:20Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.jped.2015.10.006
Jornal De Pediatria. Rio De Janeiro, Rj, v. 92, n. 4, p. 374-380, 2016.
10.1016/j.jped.2015.10.006
S0021-75572016000500374-en.pdf
S0021-75572016000500374-pt.pdf
0021-7557
S0021-75572016000500374
https://repositorio.unifesp.br/handle/11600/57601
WOS:000385025000008
url http://dx.doi.org/10.1016/j.jped.2015.10.006
https://repositorio.unifesp.br/handle/11600/57601
identifier_str_mv Jornal De Pediatria. Rio De Janeiro, Rj, v. 92, n. 4, p. 374-380, 2016.
10.1016/j.jped.2015.10.006
S0021-75572016000500374-en.pdf
S0021-75572016000500374-pt.pdf
0021-7557
S0021-75572016000500374
WOS:000385025000008
dc.language.iso.fl_str_mv eng
por
language eng
por
dc.relation.none.fl_str_mv Jornal De Pediatria
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 374-380
application/pdf
application/pdf
dc.coverage.none.fl_str_mv Rio De Janeiro, Rj
dc.publisher.none.fl_str_mv Soc Brasil Pediatria
publisher.none.fl_str_mv Soc Brasil Pediatria
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv biblioteca.csp@unifesp.br
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