Molecular analysis of the CTSK gene in a cohort of 33 Brazilian families with pycnodysostosis from a cluster in a Brazilian Northeast region
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNIFESP |
Texto Completo: | http://dx.doi.org/10.1186/s40001-016-0228-7 http://repositorio.unifesp.br/handle/11600/51161 |
Resumo: | Background: Pycnodysostosis is an autosomal recessive skeletal dysplasia, the prevalence of which is estimated to be low (1 per million). Nevertheless, in recent years we have found 27 affected individuals from 22 families in Ceara State, a region of the Brazilian Northeast, giving a local prevalence of 3 per million. This local prevalence associated with a high parental consanguinity, suggesting a possible founder effect, prompted us to perform a molecular investigation of these families to test this hypothesis. Methods: The CTSK gene was sequenced by the Sanger method in the patients and their parents. In addition to 18 families from Ceara, this study also included 15 families from other Brazilian regions. We also investigated the origin of each family from the birthplace of the parents and/or grandparents. Results: We have studied 39 patients, including 33 probands and 6 sibs, from 33 families with pycnodysostosis and identified six mutations, five previously described (c.436G>C, c.580G>A, c.721C>T, c.830C>T and c.953G>A) and one novel frameshift (c.83dupT). This frameshift variant seems to have a single origin in Ceara State, since the haplotype study using the polymorphic markers D1S2344, D1S442, D1S498 and D1S2715 suggested a common origin. Most of the mutations were found in homozygosity in the patients from Ceara (83.3 %) while in other states the mutations were found in homozygosity in half of patients. We have also shown that most of the families currently living outside of Ceara have northeastern ancestors, suggesting a dispersion of these mutations from the Brazilian Northeast. Conclusions: The high frequency of pycnodysostosis in Ceara State is the consequence of the high inbreeding in that region. Several mutations, probably introduced a long time ago in Ceara, must have spread due to consanguineous marriages and internal population migration. However, the novel mutation seems to have a single origin in Ceara, suggestive of a founder effect. |
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Molecular analysis of the CTSK gene in a cohort of 33 Brazilian families with pycnodysostosis from a cluster in a Brazilian Northeast regionPycnodysostosisCathepsin KInbreedingNovel mutationBackground: Pycnodysostosis is an autosomal recessive skeletal dysplasia, the prevalence of which is estimated to be low (1 per million). Nevertheless, in recent years we have found 27 affected individuals from 22 families in Ceara State, a region of the Brazilian Northeast, giving a local prevalence of 3 per million. This local prevalence associated with a high parental consanguinity, suggesting a possible founder effect, prompted us to perform a molecular investigation of these families to test this hypothesis. Methods: The CTSK gene was sequenced by the Sanger method in the patients and their parents. In addition to 18 families from Ceara, this study also included 15 families from other Brazilian regions. We also investigated the origin of each family from the birthplace of the parents and/or grandparents. Results: We have studied 39 patients, including 33 probands and 6 sibs, from 33 families with pycnodysostosis and identified six mutations, five previously described (c.436G>C, c.580G>A, c.721C>T, c.830C>T and c.953G>A) and one novel frameshift (c.83dupT). This frameshift variant seems to have a single origin in Ceara State, since the haplotype study using the polymorphic markers D1S2344, D1S442, D1S498 and D1S2715 suggested a common origin. Most of the mutations were found in homozygosity in the patients from Ceara (83.3 %) while in other states the mutations were found in homozygosity in half of patients. We have also shown that most of the families currently living outside of Ceara have northeastern ancestors, suggesting a dispersion of these mutations from the Brazilian Northeast. Conclusions: The high frequency of pycnodysostosis in Ceara State is the consequence of the high inbreeding in that region. Several mutations, probably introduced a long time ago in Ceara, must have spread due to consanguineous marriages and internal population migration. However, the novel mutation seems to have a single origin in Ceara, suggestive of a founder effect.Univ Estadual Campinas, Fac Med Sci, Dept Med Genet, Skeletal Dysplasia Grp, Campinas, SP, BrazilChildrens Hosp Albert Sabin, Fortaleza, Ceara, BrazilMed Sci Fac Juazeiro do Norte FMJ, Juazeiro Do Norte, CE, BrazilUniv Estadual Campinas, Dept Med Genet, Fac Med Sci, Perinatal Genet Program, Campinas, SP, BrazilUniv Fed Campina Grande, Campina Grande, PB, BrazilChildrens Clin, City Hall Guarulhos, Guarulhos, SP, BrazilFed Univ Sao Carlos UFSCAR, Dept Med, Sao Carlos, SP, BrazilUniv Sao Paulo FCMUSP, Fac Med Sci, Childrens Inst, Med Genet Unit, Sao Paulo, SP, BrazilChildrens Hosp Juvencio Mattos, Sao Luis, MA, BrazilClin Hosp Porto Alegre, Med Genet Serv, Porto Alegre, RS, BrazilUniv Fed Sao Paulo, Ctr Genet Med, Sao Paulo, SP, BrazilUniv Fed Sao Paulo, Ctr Genet Med, Sao Paulo, SP, BrazilWeb of ScienceCNPq [402008/2010-3, 590148/2011-7]CAPES [3300017023p6]Fapesp [2015/22145-6]CNPq:402008/2010-3590148/2011-7CAPES: 3300017023p6]FAPESP:2015/22145-6Biomed Central Ltd2019-07-22T15:46:54Z2019-07-22T15:46:54Z2016info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion-http://dx.doi.org/10.1186/s40001-016-0228-7European Journal Of Medical Research. London, v. 21, p. -, 2016.10.1186/s40001-016-0228-7WOS000381782800001.pdf0949-2321http://repositorio.unifesp.br/handle/11600/51161WOS:000381782800001enginfo:eu-repo/semantics/openAccessAraujo, Thais FenzRibeiro, Erlane MarquesArruda, Anderson PontesMoreno, Carolina AraujoVasconcelos de Medeiros, Paula FrassinettiMinillo, Renata MoldenhauerMelo, Debora GusmaoKim, Chong AeRodovalho Doriqui, Maria JulianaFelix, Temis MariaFock, Rodrigo Ambrosio [UNIFESP]Cavalcanti, Denise Pontesreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2019-07-22T12:46:54Zoai:repositorio.unifesp.br/:11600/51161Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652019-07-22T12:46:54Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false |
dc.title.none.fl_str_mv |
Molecular analysis of the CTSK gene in a cohort of 33 Brazilian families with pycnodysostosis from a cluster in a Brazilian Northeast region |
title |
Molecular analysis of the CTSK gene in a cohort of 33 Brazilian families with pycnodysostosis from a cluster in a Brazilian Northeast region |
spellingShingle |
Molecular analysis of the CTSK gene in a cohort of 33 Brazilian families with pycnodysostosis from a cluster in a Brazilian Northeast region Araujo, Thais Fenz Pycnodysostosis Cathepsin K Inbreeding Novel mutation |
title_short |
Molecular analysis of the CTSK gene in a cohort of 33 Brazilian families with pycnodysostosis from a cluster in a Brazilian Northeast region |
title_full |
Molecular analysis of the CTSK gene in a cohort of 33 Brazilian families with pycnodysostosis from a cluster in a Brazilian Northeast region |
title_fullStr |
Molecular analysis of the CTSK gene in a cohort of 33 Brazilian families with pycnodysostosis from a cluster in a Brazilian Northeast region |
title_full_unstemmed |
Molecular analysis of the CTSK gene in a cohort of 33 Brazilian families with pycnodysostosis from a cluster in a Brazilian Northeast region |
title_sort |
Molecular analysis of the CTSK gene in a cohort of 33 Brazilian families with pycnodysostosis from a cluster in a Brazilian Northeast region |
author |
Araujo, Thais Fenz |
author_facet |
Araujo, Thais Fenz Ribeiro, Erlane Marques Arruda, Anderson Pontes Moreno, Carolina Araujo Vasconcelos de Medeiros, Paula Frassinetti Minillo, Renata Moldenhauer Melo, Debora Gusmao Kim, Chong Ae Rodovalho Doriqui, Maria Juliana Felix, Temis Maria Fock, Rodrigo Ambrosio [UNIFESP] Cavalcanti, Denise Pontes |
author_role |
author |
author2 |
Ribeiro, Erlane Marques Arruda, Anderson Pontes Moreno, Carolina Araujo Vasconcelos de Medeiros, Paula Frassinetti Minillo, Renata Moldenhauer Melo, Debora Gusmao Kim, Chong Ae Rodovalho Doriqui, Maria Juliana Felix, Temis Maria Fock, Rodrigo Ambrosio [UNIFESP] Cavalcanti, Denise Pontes |
author2_role |
author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Araujo, Thais Fenz Ribeiro, Erlane Marques Arruda, Anderson Pontes Moreno, Carolina Araujo Vasconcelos de Medeiros, Paula Frassinetti Minillo, Renata Moldenhauer Melo, Debora Gusmao Kim, Chong Ae Rodovalho Doriqui, Maria Juliana Felix, Temis Maria Fock, Rodrigo Ambrosio [UNIFESP] Cavalcanti, Denise Pontes |
dc.subject.por.fl_str_mv |
Pycnodysostosis Cathepsin K Inbreeding Novel mutation |
topic |
Pycnodysostosis Cathepsin K Inbreeding Novel mutation |
description |
Background: Pycnodysostosis is an autosomal recessive skeletal dysplasia, the prevalence of which is estimated to be low (1 per million). Nevertheless, in recent years we have found 27 affected individuals from 22 families in Ceara State, a region of the Brazilian Northeast, giving a local prevalence of 3 per million. This local prevalence associated with a high parental consanguinity, suggesting a possible founder effect, prompted us to perform a molecular investigation of these families to test this hypothesis. Methods: The CTSK gene was sequenced by the Sanger method in the patients and their parents. In addition to 18 families from Ceara, this study also included 15 families from other Brazilian regions. We also investigated the origin of each family from the birthplace of the parents and/or grandparents. Results: We have studied 39 patients, including 33 probands and 6 sibs, from 33 families with pycnodysostosis and identified six mutations, five previously described (c.436G>C, c.580G>A, c.721C>T, c.830C>T and c.953G>A) and one novel frameshift (c.83dupT). This frameshift variant seems to have a single origin in Ceara State, since the haplotype study using the polymorphic markers D1S2344, D1S442, D1S498 and D1S2715 suggested a common origin. Most of the mutations were found in homozygosity in the patients from Ceara (83.3 %) while in other states the mutations were found in homozygosity in half of patients. We have also shown that most of the families currently living outside of Ceara have northeastern ancestors, suggesting a dispersion of these mutations from the Brazilian Northeast. Conclusions: The high frequency of pycnodysostosis in Ceara State is the consequence of the high inbreeding in that region. Several mutations, probably introduced a long time ago in Ceara, must have spread due to consanguineous marriages and internal population migration. However, the novel mutation seems to have a single origin in Ceara, suggestive of a founder effect. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016 2019-07-22T15:46:54Z 2019-07-22T15:46:54Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1186/s40001-016-0228-7 European Journal Of Medical Research. London, v. 21, p. -, 2016. 10.1186/s40001-016-0228-7 WOS000381782800001.pdf 0949-2321 http://repositorio.unifesp.br/handle/11600/51161 WOS:000381782800001 |
url |
http://dx.doi.org/10.1186/s40001-016-0228-7 http://repositorio.unifesp.br/handle/11600/51161 |
identifier_str_mv |
European Journal Of Medical Research. London, v. 21, p. -, 2016. 10.1186/s40001-016-0228-7 WOS000381782800001.pdf 0949-2321 WOS:000381782800001 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
- |
dc.publisher.none.fl_str_mv |
Biomed Central Ltd |
publisher.none.fl_str_mv |
Biomed Central Ltd |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UNIFESP instname:Universidade Federal de São Paulo (UNIFESP) instacron:UNIFESP |
instname_str |
Universidade Federal de São Paulo (UNIFESP) |
instacron_str |
UNIFESP |
institution |
UNIFESP |
reponame_str |
Repositório Institucional da UNIFESP |
collection |
Repositório Institucional da UNIFESP |
repository.name.fl_str_mv |
Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP) |
repository.mail.fl_str_mv |
biblioteca.csp@unifesp.br |
_version_ |
1814268434366595072 |