Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle

Detalhes bibliográficos
Autor(a) principal: Melo, Tatiana C. [UNIFESP]
Data de Publicação: 2014
Outros Autores: Carvalho, Rodrigo Franco de, Mazzucchelli-de-Souza, Jacqueline, Diniz, Nara Soares Pessoa, Vasconcelos, S., Assaf, Suely Lucia Muro Rais, Araldi, Rodrigo Pinheiro, Ruiz, Renato de Mello, Kerkis, Irina [UNIFESP], Beçak, Willy, Stocco, Rita de Cassia
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNIFESP
Texto Completo: http://repositorio.unifesp.br/handle/11600/37189
http://dx.doi.org/10.4238/2014.April.3.18
Resumo: Bovine papillomaviruses (BPVs) are recognized as causal agents of benign and malignant tumors in cattle. Thirteen types of BPVs have already been described and classified into 3 distinct genera. Divergences in the nucleotide sequence of the L1 gene are used to identify new viral types through the employment of PCR assays with degenerated primers. in the present study, a method for identifying BPVs based on PCR-RFLP and DNA sequencing allowed the identification of a new putative Deltapapillomavirus, designated JN/3SP (JQ280500.1). the analysis of the L1 gene showed that this strain was most closely related to the BPVs -1, -2, -13, and OaPV1 (71-73% genetic similarity). in this study, we describe the detection of this new putative Deltapapillomavirus type and verify its phylogenetic position within the genus.
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spelling Melo, Tatiana C. [UNIFESP]Carvalho, Rodrigo Franco deMazzucchelli-de-Souza, JacquelineDiniz, Nara Soares PessoaVasconcelos, S.Assaf, Suely Lucia Muro RaisAraldi, Rodrigo PinheiroRuiz, Renato de MelloKerkis, Irina [UNIFESP]Beçak, WillyStocco, Rita de CassiaInst ButantanUniversidade Federal de São Paulo (UNIFESP)Universidade de São Paulo (USP)Universidade Federal de Pernambuco (UFPE)Univ Fed Integracao Latino Amer2016-01-24T14:35:00Z2016-01-24T14:35:00Z2014-01-01Genetics and Molecular Research. Ribeirao Preto: Funpec-editora, v. 13, n. 2, p. 2458-2469, 2014.1676-5680http://repositorio.unifesp.br/handle/11600/37189http://dx.doi.org/10.4238/2014.April.3.1810.4238/2014.April.3.18WOS:000336729500014Bovine papillomaviruses (BPVs) are recognized as causal agents of benign and malignant tumors in cattle. Thirteen types of BPVs have already been described and classified into 3 distinct genera. Divergences in the nucleotide sequence of the L1 gene are used to identify new viral types through the employment of PCR assays with degenerated primers. in the present study, a method for identifying BPVs based on PCR-RFLP and DNA sequencing allowed the identification of a new putative Deltapapillomavirus, designated JN/3SP (JQ280500.1). the analysis of the L1 gene showed that this strain was most closely related to the BPVs -1, -2, -13, and OaPV1 (71-73% genetic similarity). in this study, we describe the detection of this new putative Deltapapillomavirus type and verify its phylogenetic position within the genus.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Inst Butantan, Lab Genet, São Paulo, BrazilUniversidade Federal de São Paulo, Programa Posgrad Biol Estrutural & Func, São Paulo, BrazilUniv São Paulo, Programa Posgrad Interunidades Biotecnol, São Paulo, BrazilUniv Fed Pernambuco, Dept Bot, Recife, PE, BrazilUniv Fed Integracao Latino Amer, Dept Biol, Foz Do Iguacu, PR, BrazilUniversidade Federal de São Paulo, Programa Posgrad Biol Estrutural & Func, São Paulo, BrazilCNPq: 402539/2011-7CNPq: 554816/2006-7Web of Science2458-2469engFunpec-editoraGenetics and Molecular ResearchBovine papillomavirusNew putative DeltapapillomavirusPhylogeneticsPCR-RFLPSequencingPhylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP11600/371892023-01-12 21:52:29.885metadata only accessoai:repositorio.unifesp.br:11600/37189Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestopendoar:34652023-01-13T00:52:29Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.en.fl_str_mv Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle
title Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle
spellingShingle Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle
Melo, Tatiana C. [UNIFESP]
Bovine papillomavirus
New putative Deltapapillomavirus
Phylogenetics
PCR-RFLP
Sequencing
title_short Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle
title_full Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle
title_fullStr Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle
title_full_unstemmed Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle
title_sort Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle
author Melo, Tatiana C. [UNIFESP]
author_facet Melo, Tatiana C. [UNIFESP]
Carvalho, Rodrigo Franco de
Mazzucchelli-de-Souza, Jacqueline
Diniz, Nara Soares Pessoa
Vasconcelos, S.
Assaf, Suely Lucia Muro Rais
Araldi, Rodrigo Pinheiro
Ruiz, Renato de Mello
Kerkis, Irina [UNIFESP]
Beçak, Willy
Stocco, Rita de Cassia
author_role author
author2 Carvalho, Rodrigo Franco de
Mazzucchelli-de-Souza, Jacqueline
Diniz, Nara Soares Pessoa
Vasconcelos, S.
Assaf, Suely Lucia Muro Rais
Araldi, Rodrigo Pinheiro
Ruiz, Renato de Mello
Kerkis, Irina [UNIFESP]
Beçak, Willy
Stocco, Rita de Cassia
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.institution.none.fl_str_mv Inst Butantan
Universidade Federal de São Paulo (UNIFESP)
Universidade de São Paulo (USP)
Universidade Federal de Pernambuco (UFPE)
Univ Fed Integracao Latino Amer
dc.contributor.author.fl_str_mv Melo, Tatiana C. [UNIFESP]
Carvalho, Rodrigo Franco de
Mazzucchelli-de-Souza, Jacqueline
Diniz, Nara Soares Pessoa
Vasconcelos, S.
Assaf, Suely Lucia Muro Rais
Araldi, Rodrigo Pinheiro
Ruiz, Renato de Mello
Kerkis, Irina [UNIFESP]
Beçak, Willy
Stocco, Rita de Cassia
dc.subject.eng.fl_str_mv Bovine papillomavirus
New putative Deltapapillomavirus
Phylogenetics
PCR-RFLP
Sequencing
topic Bovine papillomavirus
New putative Deltapapillomavirus
Phylogenetics
PCR-RFLP
Sequencing
description Bovine papillomaviruses (BPVs) are recognized as causal agents of benign and malignant tumors in cattle. Thirteen types of BPVs have already been described and classified into 3 distinct genera. Divergences in the nucleotide sequence of the L1 gene are used to identify new viral types through the employment of PCR assays with degenerated primers. in the present study, a method for identifying BPVs based on PCR-RFLP and DNA sequencing allowed the identification of a new putative Deltapapillomavirus, designated JN/3SP (JQ280500.1). the analysis of the L1 gene showed that this strain was most closely related to the BPVs -1, -2, -13, and OaPV1 (71-73% genetic similarity). in this study, we describe the detection of this new putative Deltapapillomavirus type and verify its phylogenetic position within the genus.
publishDate 2014
dc.date.issued.fl_str_mv 2014-01-01
dc.date.accessioned.fl_str_mv 2016-01-24T14:35:00Z
dc.date.available.fl_str_mv 2016-01-24T14:35:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv Genetics and Molecular Research. Ribeirao Preto: Funpec-editora, v. 13, n. 2, p. 2458-2469, 2014.
dc.identifier.uri.fl_str_mv http://repositorio.unifesp.br/handle/11600/37189
http://dx.doi.org/10.4238/2014.April.3.18
dc.identifier.issn.none.fl_str_mv 1676-5680
dc.identifier.doi.none.fl_str_mv 10.4238/2014.April.3.18
dc.identifier.wos.none.fl_str_mv WOS:000336729500014
identifier_str_mv Genetics and Molecular Research. Ribeirao Preto: Funpec-editora, v. 13, n. 2, p. 2458-2469, 2014.
1676-5680
10.4238/2014.April.3.18
WOS:000336729500014
url http://repositorio.unifesp.br/handle/11600/37189
http://dx.doi.org/10.4238/2014.April.3.18
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.none.fl_str_mv Genetics and Molecular Research
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 2458-2469
dc.publisher.none.fl_str_mv Funpec-editora
publisher.none.fl_str_mv Funpec-editora
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv
_version_ 1802764119502225408

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