Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle
Autor(a) principal: | |
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Data de Publicação: | 2014 |
Outros Autores: | , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNIFESP |
Texto Completo: | http://repositorio.unifesp.br/handle/11600/37189 http://dx.doi.org/10.4238/2014.April.3.18 |
Resumo: | Bovine papillomaviruses (BPVs) are recognized as causal agents of benign and malignant tumors in cattle. Thirteen types of BPVs have already been described and classified into 3 distinct genera. Divergences in the nucleotide sequence of the L1 gene are used to identify new viral types through the employment of PCR assays with degenerated primers. in the present study, a method for identifying BPVs based on PCR-RFLP and DNA sequencing allowed the identification of a new putative Deltapapillomavirus, designated JN/3SP (JQ280500.1). the analysis of the L1 gene showed that this strain was most closely related to the BPVs -1, -2, -13, and OaPV1 (71-73% genetic similarity). in this study, we describe the detection of this new putative Deltapapillomavirus type and verify its phylogenetic position within the genus. |
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Melo, Tatiana C. [UNIFESP]Carvalho, Rodrigo Franco deMazzucchelli-de-Souza, JacquelineDiniz, Nara Soares PessoaVasconcelos, S.Assaf, Suely Lucia Muro RaisAraldi, Rodrigo PinheiroRuiz, Renato de MelloKerkis, Irina [UNIFESP]Beçak, WillyStocco, Rita de CassiaInst ButantanUniversidade Federal de São Paulo (UNIFESP)Universidade de São Paulo (USP)Universidade Federal de Pernambuco (UFPE)Univ Fed Integracao Latino Amer2016-01-24T14:35:00Z2016-01-24T14:35:00Z2014-01-01Genetics and Molecular Research. Ribeirao Preto: Funpec-editora, v. 13, n. 2, p. 2458-2469, 2014.1676-5680http://repositorio.unifesp.br/handle/11600/37189http://dx.doi.org/10.4238/2014.April.3.1810.4238/2014.April.3.18WOS:000336729500014Bovine papillomaviruses (BPVs) are recognized as causal agents of benign and malignant tumors in cattle. Thirteen types of BPVs have already been described and classified into 3 distinct genera. Divergences in the nucleotide sequence of the L1 gene are used to identify new viral types through the employment of PCR assays with degenerated primers. in the present study, a method for identifying BPVs based on PCR-RFLP and DNA sequencing allowed the identification of a new putative Deltapapillomavirus, designated JN/3SP (JQ280500.1). the analysis of the L1 gene showed that this strain was most closely related to the BPVs -1, -2, -13, and OaPV1 (71-73% genetic similarity). in this study, we describe the detection of this new putative Deltapapillomavirus type and verify its phylogenetic position within the genus.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Inst Butantan, Lab Genet, São Paulo, BrazilUniversidade Federal de São Paulo, Programa Posgrad Biol Estrutural & Func, São Paulo, BrazilUniv São Paulo, Programa Posgrad Interunidades Biotecnol, São Paulo, BrazilUniv Fed Pernambuco, Dept Bot, Recife, PE, BrazilUniv Fed Integracao Latino Amer, Dept Biol, Foz Do Iguacu, PR, BrazilUniversidade Federal de São Paulo, Programa Posgrad Biol Estrutural & Func, São Paulo, BrazilCNPq: 402539/2011-7CNPq: 554816/2006-7Web of Science2458-2469engFunpec-editoraGenetics and Molecular ResearchBovine papillomavirusNew putative DeltapapillomavirusPhylogeneticsPCR-RFLPSequencingPhylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP11600/371892023-01-12 21:52:29.885metadata only accessoai:repositorio.unifesp.br:11600/37189Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestopendoar:34652023-01-13T00:52:29Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false |
dc.title.en.fl_str_mv |
Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle |
title |
Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle |
spellingShingle |
Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle Melo, Tatiana C. [UNIFESP] Bovine papillomavirus New putative Deltapapillomavirus Phylogenetics PCR-RFLP Sequencing |
title_short |
Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle |
title_full |
Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle |
title_fullStr |
Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle |
title_full_unstemmed |
Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle |
title_sort |
Phylogenetic classification and clinical aspects of a new putative Deltapapillomavirus associated with skin lesions in cattle |
author |
Melo, Tatiana C. [UNIFESP] |
author_facet |
Melo, Tatiana C. [UNIFESP] Carvalho, Rodrigo Franco de Mazzucchelli-de-Souza, Jacqueline Diniz, Nara Soares Pessoa Vasconcelos, S. Assaf, Suely Lucia Muro Rais Araldi, Rodrigo Pinheiro Ruiz, Renato de Mello Kerkis, Irina [UNIFESP] Beçak, Willy Stocco, Rita de Cassia |
author_role |
author |
author2 |
Carvalho, Rodrigo Franco de Mazzucchelli-de-Souza, Jacqueline Diniz, Nara Soares Pessoa Vasconcelos, S. Assaf, Suely Lucia Muro Rais Araldi, Rodrigo Pinheiro Ruiz, Renato de Mello Kerkis, Irina [UNIFESP] Beçak, Willy Stocco, Rita de Cassia |
author2_role |
author author author author author author author author author author |
dc.contributor.institution.none.fl_str_mv |
Inst Butantan Universidade Federal de São Paulo (UNIFESP) Universidade de São Paulo (USP) Universidade Federal de Pernambuco (UFPE) Univ Fed Integracao Latino Amer |
dc.contributor.author.fl_str_mv |
Melo, Tatiana C. [UNIFESP] Carvalho, Rodrigo Franco de Mazzucchelli-de-Souza, Jacqueline Diniz, Nara Soares Pessoa Vasconcelos, S. Assaf, Suely Lucia Muro Rais Araldi, Rodrigo Pinheiro Ruiz, Renato de Mello Kerkis, Irina [UNIFESP] Beçak, Willy Stocco, Rita de Cassia |
dc.subject.eng.fl_str_mv |
Bovine papillomavirus New putative Deltapapillomavirus Phylogenetics PCR-RFLP Sequencing |
topic |
Bovine papillomavirus New putative Deltapapillomavirus Phylogenetics PCR-RFLP Sequencing |
description |
Bovine papillomaviruses (BPVs) are recognized as causal agents of benign and malignant tumors in cattle. Thirteen types of BPVs have already been described and classified into 3 distinct genera. Divergences in the nucleotide sequence of the L1 gene are used to identify new viral types through the employment of PCR assays with degenerated primers. in the present study, a method for identifying BPVs based on PCR-RFLP and DNA sequencing allowed the identification of a new putative Deltapapillomavirus, designated JN/3SP (JQ280500.1). the analysis of the L1 gene showed that this strain was most closely related to the BPVs -1, -2, -13, and OaPV1 (71-73% genetic similarity). in this study, we describe the detection of this new putative Deltapapillomavirus type and verify its phylogenetic position within the genus. |
publishDate |
2014 |
dc.date.issued.fl_str_mv |
2014-01-01 |
dc.date.accessioned.fl_str_mv |
2016-01-24T14:35:00Z |
dc.date.available.fl_str_mv |
2016-01-24T14:35:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
Genetics and Molecular Research. Ribeirao Preto: Funpec-editora, v. 13, n. 2, p. 2458-2469, 2014. |
dc.identifier.uri.fl_str_mv |
http://repositorio.unifesp.br/handle/11600/37189 http://dx.doi.org/10.4238/2014.April.3.18 |
dc.identifier.issn.none.fl_str_mv |
1676-5680 |
dc.identifier.doi.none.fl_str_mv |
10.4238/2014.April.3.18 |
dc.identifier.wos.none.fl_str_mv |
WOS:000336729500014 |
identifier_str_mv |
Genetics and Molecular Research. Ribeirao Preto: Funpec-editora, v. 13, n. 2, p. 2458-2469, 2014. 1676-5680 10.4238/2014.April.3.18 WOS:000336729500014 |
url |
http://repositorio.unifesp.br/handle/11600/37189 http://dx.doi.org/10.4238/2014.April.3.18 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.none.fl_str_mv |
Genetics and Molecular Research |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
2458-2469 |
dc.publisher.none.fl_str_mv |
Funpec-editora |
publisher.none.fl_str_mv |
Funpec-editora |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UNIFESP instname:Universidade Federal de São Paulo (UNIFESP) instacron:UNIFESP |
instname_str |
Universidade Federal de São Paulo (UNIFESP) |
instacron_str |
UNIFESP |
institution |
UNIFESP |
reponame_str |
Repositório Institucional da UNIFESP |
collection |
Repositório Institucional da UNIFESP |
repository.name.fl_str_mv |
Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP) |
repository.mail.fl_str_mv |
|
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1802764119502225408 |