Identificação de genes potencialmente envolvidos na interação tomateiro - Potyvirus

Detalhes bibliográficos
Autor(a) principal: Zerbini, Poliane Alfenas
Data de Publicação: 2006
Tipo de documento: Tese
Idioma: por
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: http://locus.ufv.br/handle/123456789/1383
Resumo: During co-evolution between virus and host, a complex interaction has been developed involving several mechanisms of pathogen attack and host defense. Host defense responses cause up- and downward shifts in gene expression. However, the effects of viral infection in the host s gene expression profile are still poorly understood. With the objective of identifying differentially expressed genes in a virushost interaction, susceptible tomato plants were inoculated with the potyvirus Pepper yellow mosaic virus (PepYMV), and a subtractive library was constructed based on mRNA extracted from inoculated leaves at 72 h after inoculation. A total of 777 genes differentially expressed were identified, including genes involved in a number of plant defense responses as well as transcriptional regulators and signaling proteins, including catalase, aldolase, cystein proteases, heat shock proteins, polyubiquitin, proteassome subunits, proteins involved in gene silencing, among others. A total of 104 down-regulated genes were also identified, which likewise display homology with genes involved in several metabolic pathways. Differential expression of selected genes was validated by quantitative RT-PCR and macroarray analysis. The study of these genes, together with information on the viral infection cycle, provides a global view of the host factors used by the virus to synthesize its proteins and to infect new cells and tissues, as well as the responses from the host, in its attempt to contain or at least minimize the damage caused by the infection. Functional analysis of these genes will be necessary in order to determine their specific role in the interaction.
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spelling Zerbini, Poliane Alfenashttp://lattes.cnpq.br/8632328159533071Cascardo, Júlio Cezar Mattoshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4723204T2Araujo, Elza Fernandes dehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783675E2Zerbini Júnior, Francisco Murilohttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783743U5Maia, Ivan de Godoyhttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4793919J9Fontes, Elizabeth Pacheco Batistahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781848H2Brommonschenkel, Sérgio Hermíniohttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780948Y42015-03-26T12:45:40Z2013-11-292015-03-26T12:45:40Z2006-03-20ZERBINI, Poliane Alfenas. Identification of genes potentially involved in the interaction tomato - Potyvirus. 2006. 65 f. Tese (Doutorado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2006.http://locus.ufv.br/handle/123456789/1383During co-evolution between virus and host, a complex interaction has been developed involving several mechanisms of pathogen attack and host defense. Host defense responses cause up- and downward shifts in gene expression. However, the effects of viral infection in the host s gene expression profile are still poorly understood. With the objective of identifying differentially expressed genes in a virushost interaction, susceptible tomato plants were inoculated with the potyvirus Pepper yellow mosaic virus (PepYMV), and a subtractive library was constructed based on mRNA extracted from inoculated leaves at 72 h after inoculation. A total of 777 genes differentially expressed were identified, including genes involved in a number of plant defense responses as well as transcriptional regulators and signaling proteins, including catalase, aldolase, cystein proteases, heat shock proteins, polyubiquitin, proteassome subunits, proteins involved in gene silencing, among others. A total of 104 down-regulated genes were also identified, which likewise display homology with genes involved in several metabolic pathways. Differential expression of selected genes was validated by quantitative RT-PCR and macroarray analysis. The study of these genes, together with information on the viral infection cycle, provides a global view of the host factors used by the virus to synthesize its proteins and to infect new cells and tissues, as well as the responses from the host, in its attempt to contain or at least minimize the damage caused by the infection. Functional analysis of these genes will be necessary in order to determine their specific role in the interaction.Durante a coevolução entre vírus e hospedeiro desenvolve-se uma interação complexa envolvendo diversos mecanismos de ataque do patógeno, e de defesa do hospedeiro. A alteração no padrão de expressão gênica do hospedeiro é uma conseqüência desses mecanismos. Entretanto, o conhecimento sobre os efeitos da infecção viral na expressão gênica ainda é limitado. Com o objetivo de identificar genes diferencialmente expressos em uma interação vírus - planta, uma biblioteca subtrativa foi produzida a partir de plantas suscetíveis de tomateiro infectadas pelo potyvírus Pepper yellow mosaic virus (PepYMV), utilizando-se folhas inoculadas, 72 horas após a inoculação. Foram identificados 777 genes diferencialmente expressos durante a infecção viral, que possuem homologia com proteases, proteossomos, diversos fatores de transcrição, proteínas envolvidas na via de ubiquitinação, proteínas de resposta a choque térmico, catalases, proteínas envolvidas em silenciamento gênico, dentre outras. Também foram identificados 104 genes reprimidos, que da mesma forma apresentaram homologia com genes envolvidos em diversas vias celulares. A expressão diferencial dos genes foi validada por RTPCR quantitativo e análise de macroarranjos. O estudo dos genes identificados, em conjunto com as informações sobre o ciclo de infecção viral, proporciona uma visão global de como o vírus utiliza fatores do hospedeiro para a biossíntese de proteínas virais e infecção de novos tecidos, e também das respostas de defesa do hospedeiro na tentativa de conter, ou ao menos minimizar, os danos causados pela infecção viral. A análise funcional dos genes identificados será necessária para determinar seu papel específico na interação.Universidade Federal de Viçosaapplication/pdfporUniversidade Federal de ViçosaDoutorado em Genética e MelhoramentoUFVBRGenética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; MeInteração PepYMVTomateiroTranscriptomaVIGSInteraction PepYMVTomatoTranscriptomeVIGSCNPQ::CIENCIAS AGRARIAS::AGRONOMIA::FITOTECNIA::MELHORAMENTO VEGETALIdentificação de genes potencialmente envolvidos na interação tomateiro - PotyvirusIdentification of genes potentially involved in the interaction tomato - Potyvirusinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALtexto completo.pdfapplication/pdf1540861https://locus.ufv.br//bitstream/123456789/1383/1/texto%20completo.pdfc42c7004648b800ccaa5bd04bd6ec71eMD51TEXTtexto completo.pdf.txttexto completo.pdf.txtExtracted texttext/plain139462https://locus.ufv.br//bitstream/123456789/1383/2/texto%20completo.pdf.txtb7cd80be2a8ac3d13b0a57501a3259cdMD52THUMBNAILtexto completo.pdf.jpgtexto completo.pdf.jpgIM Thumbnailimage/jpeg3529https://locus.ufv.br//bitstream/123456789/1383/3/texto%20completo.pdf.jpgec1af838290c2700dd3fc4268cfc75e5MD53123456789/13832016-04-07 23:07:49.89oai:locus.ufv.br:123456789/1383Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452016-04-08T02:07:49LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.por.fl_str_mv Identificação de genes potencialmente envolvidos na interação tomateiro - Potyvirus
dc.title.alternative.eng.fl_str_mv Identification of genes potentially involved in the interaction tomato - Potyvirus
title Identificação de genes potencialmente envolvidos na interação tomateiro - Potyvirus
spellingShingle Identificação de genes potencialmente envolvidos na interação tomateiro - Potyvirus
Zerbini, Poliane Alfenas
Interação PepYMV
Tomateiro
Transcriptoma
VIGS
Interaction PepYMV
Tomato
Transcriptome
VIGS
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA::FITOTECNIA::MELHORAMENTO VEGETAL
title_short Identificação de genes potencialmente envolvidos na interação tomateiro - Potyvirus
title_full Identificação de genes potencialmente envolvidos na interação tomateiro - Potyvirus
title_fullStr Identificação de genes potencialmente envolvidos na interação tomateiro - Potyvirus
title_full_unstemmed Identificação de genes potencialmente envolvidos na interação tomateiro - Potyvirus
title_sort Identificação de genes potencialmente envolvidos na interação tomateiro - Potyvirus
author Zerbini, Poliane Alfenas
author_facet Zerbini, Poliane Alfenas
author_role author
dc.contributor.authorLattes.por.fl_str_mv http://lattes.cnpq.br/8632328159533071
dc.contributor.author.fl_str_mv Zerbini, Poliane Alfenas
dc.contributor.advisor-co1.fl_str_mv Cascardo, Júlio Cezar Mattos
dc.contributor.advisor-co1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4723204T2
dc.contributor.advisor-co2.fl_str_mv Araujo, Elza Fernandes de
dc.contributor.advisor-co2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783675E2
dc.contributor.advisor1.fl_str_mv Zerbini Júnior, Francisco Murilo
dc.contributor.advisor1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783743U5
dc.contributor.referee1.fl_str_mv Maia, Ivan de Godoy
dc.contributor.referee1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4793919J9
dc.contributor.referee2.fl_str_mv Fontes, Elizabeth Pacheco Batista
dc.contributor.referee2Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781848H2
dc.contributor.referee3.fl_str_mv Brommonschenkel, Sérgio Hermínio
dc.contributor.referee3Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780948Y4
contributor_str_mv Cascardo, Júlio Cezar Mattos
Araujo, Elza Fernandes de
Zerbini Júnior, Francisco Murilo
Maia, Ivan de Godoy
Fontes, Elizabeth Pacheco Batista
Brommonschenkel, Sérgio Hermínio
dc.subject.por.fl_str_mv Interação PepYMV
Tomateiro
Transcriptoma
VIGS
topic Interação PepYMV
Tomateiro
Transcriptoma
VIGS
Interaction PepYMV
Tomato
Transcriptome
VIGS
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA::FITOTECNIA::MELHORAMENTO VEGETAL
dc.subject.eng.fl_str_mv Interaction PepYMV
Tomato
Transcriptome
VIGS
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS AGRARIAS::AGRONOMIA::FITOTECNIA::MELHORAMENTO VEGETAL
description During co-evolution between virus and host, a complex interaction has been developed involving several mechanisms of pathogen attack and host defense. Host defense responses cause up- and downward shifts in gene expression. However, the effects of viral infection in the host s gene expression profile are still poorly understood. With the objective of identifying differentially expressed genes in a virushost interaction, susceptible tomato plants were inoculated with the potyvirus Pepper yellow mosaic virus (PepYMV), and a subtractive library was constructed based on mRNA extracted from inoculated leaves at 72 h after inoculation. A total of 777 genes differentially expressed were identified, including genes involved in a number of plant defense responses as well as transcriptional regulators and signaling proteins, including catalase, aldolase, cystein proteases, heat shock proteins, polyubiquitin, proteassome subunits, proteins involved in gene silencing, among others. A total of 104 down-regulated genes were also identified, which likewise display homology with genes involved in several metabolic pathways. Differential expression of selected genes was validated by quantitative RT-PCR and macroarray analysis. The study of these genes, together with information on the viral infection cycle, provides a global view of the host factors used by the virus to synthesize its proteins and to infect new cells and tissues, as well as the responses from the host, in its attempt to contain or at least minimize the damage caused by the infection. Functional analysis of these genes will be necessary in order to determine their specific role in the interaction.
publishDate 2006
dc.date.issued.fl_str_mv 2006-03-20
dc.date.available.fl_str_mv 2013-11-29
2015-03-26T12:45:40Z
dc.date.accessioned.fl_str_mv 2015-03-26T12:45:40Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
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dc.identifier.citation.fl_str_mv ZERBINI, Poliane Alfenas. Identification of genes potentially involved in the interaction tomato - Potyvirus. 2006. 65 f. Tese (Doutorado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2006.
dc.identifier.uri.fl_str_mv http://locus.ufv.br/handle/123456789/1383
identifier_str_mv ZERBINI, Poliane Alfenas. Identification of genes potentially involved in the interaction tomato - Potyvirus. 2006. 65 f. Tese (Doutorado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2006.
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dc.publisher.none.fl_str_mv Universidade Federal de Viçosa
dc.publisher.program.fl_str_mv Doutorado em Genética e Melhoramento
dc.publisher.initials.fl_str_mv UFV
dc.publisher.country.fl_str_mv BR
dc.publisher.department.fl_str_mv Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me
publisher.none.fl_str_mv Universidade Federal de Viçosa
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