A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon)
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1371/journal.pone.0034797 http://hdl.handle.net/11449/18019 |
Resumo: | Obtaining accurate species-specific landings data is an essential step toward achieving sustainable shark fisheries. Globally distributed sharpnose sharks (genus Rhizoprionodon) exhibit life-history characteristics (rapid growth, early maturity, annual reproduction) that suggests that they could be fished in a sustainable manner assuming an investment in monitoring, assessment and careful management. However, obtaining species-specific landings data for sharpnose sharks is problematic because they are morphologically very similar to one another. Moreover, sharpnose sharks may also be confused with other small sharks (either small species or juveniles of large species) once they are processed (i.e., the head and fins are removed). Here we present a highly streamlined molecular genetics approach based on seven species-specific PCR primers in a multiplex format that can simultaneously discriminate body parts from the seven described sharpnose shark species commonly occurring in coastal fisheries worldwide. The species-specific primers are based on nucleotide sequence differences among species in the nuclear ribosomal internal transcribed spacer 2 locus (ITS2). This approach also distinguishes sharpnose sharks from a wide range of other sharks (52 species) and can therefore assist in the regulation of coastal shark fisheries around the world. |
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spelling |
A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon)Obtaining accurate species-specific landings data is an essential step toward achieving sustainable shark fisheries. Globally distributed sharpnose sharks (genus Rhizoprionodon) exhibit life-history characteristics (rapid growth, early maturity, annual reproduction) that suggests that they could be fished in a sustainable manner assuming an investment in monitoring, assessment and careful management. However, obtaining species-specific landings data for sharpnose sharks is problematic because they are morphologically very similar to one another. Moreover, sharpnose sharks may also be confused with other small sharks (either small species or juveniles of large species) once they are processed (i.e., the head and fins are removed). Here we present a highly streamlined molecular genetics approach based on seven species-specific PCR primers in a multiplex format that can simultaneously discriminate body parts from the seven described sharpnose shark species commonly occurring in coastal fisheries worldwide. The species-specific primers are based on nucleotide sequence differences among species in the nuclear ribosomal internal transcribed spacer 2 locus (ITS2). This approach also distinguishes sharpnose sharks from a wide range of other sharks (52 species) and can therefore assist in the regulation of coastal shark fisheries around the world.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Save Our Seas FoundationHai Stiftung/Shark FoundationUNESP São Paulo State Univ, Dept Genet, São Paulo, BrazilNova SE Univ, Save Our Seas Shark Ctr, Dania, FL USANova SE Univ, Oceanog Ctr, Guy Harvey Res Inst, Dania, FL USASUNY Stony Brook, Sch Marine & Atmospher Sci, Stony Brook, NY 11794 USASUNY Stony Brook, Inst Ocean Conservat Sci, Stony Brook, NY 11794 USAUNESP São Paulo State Univ, Dept Morphol, São Paulo, BrazilUNESP São Paulo State Univ, Dept Genet, São Paulo, BrazilUNESP São Paulo State Univ, Dept Morphol, São Paulo, BrazilFAPESP: 07/03067-8FAPESP: 07/03065-5Public Library ScienceUniversidade Estadual Paulista (Unesp)Nova SE UnivSUNY Stony BrookPinhal, Danillo [UNESP]Shivji, Mahmood S.Nachtigall, Pedro G. [UNESP]Chapman, Demian D.Martins, Cesar [UNESP]2014-05-20T13:50:30Z2014-05-20T13:50:30Z2012-04-09info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article6application/pdfhttp://dx.doi.org/10.1371/journal.pone.0034797Plos One. San Francisco: Public Library Science, v. 7, n. 4, p. 6, 2012.1932-6203http://hdl.handle.net/11449/1801910.1371/journal.pone.0034797WOS:000305014500032WOS000305014500032.pdf88588006994253520000-0003-3534-974XWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPLOS ONE2.7661,164info:eu-repo/semantics/openAccess2023-10-18T06:06:53Zoai:repositorio.unesp.br:11449/18019Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:14:59.521267Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon) |
title |
A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon) |
spellingShingle |
A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon) Pinhal, Danillo [UNESP] |
title_short |
A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon) |
title_full |
A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon) |
title_fullStr |
A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon) |
title_full_unstemmed |
A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon) |
title_sort |
A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon) |
author |
Pinhal, Danillo [UNESP] |
author_facet |
Pinhal, Danillo [UNESP] Shivji, Mahmood S. Nachtigall, Pedro G. [UNESP] Chapman, Demian D. Martins, Cesar [UNESP] |
author_role |
author |
author2 |
Shivji, Mahmood S. Nachtigall, Pedro G. [UNESP] Chapman, Demian D. Martins, Cesar [UNESP] |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Nova SE Univ SUNY Stony Brook |
dc.contributor.author.fl_str_mv |
Pinhal, Danillo [UNESP] Shivji, Mahmood S. Nachtigall, Pedro G. [UNESP] Chapman, Demian D. Martins, Cesar [UNESP] |
description |
Obtaining accurate species-specific landings data is an essential step toward achieving sustainable shark fisheries. Globally distributed sharpnose sharks (genus Rhizoprionodon) exhibit life-history characteristics (rapid growth, early maturity, annual reproduction) that suggests that they could be fished in a sustainable manner assuming an investment in monitoring, assessment and careful management. However, obtaining species-specific landings data for sharpnose sharks is problematic because they are morphologically very similar to one another. Moreover, sharpnose sharks may also be confused with other small sharks (either small species or juveniles of large species) once they are processed (i.e., the head and fins are removed). Here we present a highly streamlined molecular genetics approach based on seven species-specific PCR primers in a multiplex format that can simultaneously discriminate body parts from the seven described sharpnose shark species commonly occurring in coastal fisheries worldwide. The species-specific primers are based on nucleotide sequence differences among species in the nuclear ribosomal internal transcribed spacer 2 locus (ITS2). This approach also distinguishes sharpnose sharks from a wide range of other sharks (52 species) and can therefore assist in the regulation of coastal shark fisheries around the world. |
publishDate |
2012 |
dc.date.none.fl_str_mv |
2012-04-09 2014-05-20T13:50:30Z 2014-05-20T13:50:30Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1371/journal.pone.0034797 Plos One. San Francisco: Public Library Science, v. 7, n. 4, p. 6, 2012. 1932-6203 http://hdl.handle.net/11449/18019 10.1371/journal.pone.0034797 WOS:000305014500032 WOS000305014500032.pdf 8858800699425352 0000-0003-3534-974X |
url |
http://dx.doi.org/10.1371/journal.pone.0034797 http://hdl.handle.net/11449/18019 |
identifier_str_mv |
Plos One. San Francisco: Public Library Science, v. 7, n. 4, p. 6, 2012. 1932-6203 10.1371/journal.pone.0034797 WOS:000305014500032 WOS000305014500032.pdf 8858800699425352 0000-0003-3534-974X |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
PLOS ONE 2.766 1,164 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
6 application/pdf |
dc.publisher.none.fl_str_mv |
Public Library Science |
publisher.none.fl_str_mv |
Public Library Science |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128486609518592 |