A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon)

Detalhes bibliográficos
Autor(a) principal: Pinhal, Danillo [UNESP]
Data de Publicação: 2012
Outros Autores: Shivji, Mahmood S., Nachtigall, Pedro G. [UNESP], Chapman, Demian D., Martins, Cesar [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1371/journal.pone.0034797
http://hdl.handle.net/11449/18019
Resumo: Obtaining accurate species-specific landings data is an essential step toward achieving sustainable shark fisheries. Globally distributed sharpnose sharks (genus Rhizoprionodon) exhibit life-history characteristics (rapid growth, early maturity, annual reproduction) that suggests that they could be fished in a sustainable manner assuming an investment in monitoring, assessment and careful management. However, obtaining species-specific landings data for sharpnose sharks is problematic because they are morphologically very similar to one another. Moreover, sharpnose sharks may also be confused with other small sharks (either small species or juveniles of large species) once they are processed (i.e., the head and fins are removed). Here we present a highly streamlined molecular genetics approach based on seven species-specific PCR primers in a multiplex format that can simultaneously discriminate body parts from the seven described sharpnose shark species commonly occurring in coastal fisheries worldwide. The species-specific primers are based on nucleotide sequence differences among species in the nuclear ribosomal internal transcribed spacer 2 locus (ITS2). This approach also distinguishes sharpnose sharks from a wide range of other sharks (52 species) and can therefore assist in the regulation of coastal shark fisheries around the world.
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spelling A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon)Obtaining accurate species-specific landings data is an essential step toward achieving sustainable shark fisheries. Globally distributed sharpnose sharks (genus Rhizoprionodon) exhibit life-history characteristics (rapid growth, early maturity, annual reproduction) that suggests that they could be fished in a sustainable manner assuming an investment in monitoring, assessment and careful management. However, obtaining species-specific landings data for sharpnose sharks is problematic because they are morphologically very similar to one another. Moreover, sharpnose sharks may also be confused with other small sharks (either small species or juveniles of large species) once they are processed (i.e., the head and fins are removed). Here we present a highly streamlined molecular genetics approach based on seven species-specific PCR primers in a multiplex format that can simultaneously discriminate body parts from the seven described sharpnose shark species commonly occurring in coastal fisheries worldwide. The species-specific primers are based on nucleotide sequence differences among species in the nuclear ribosomal internal transcribed spacer 2 locus (ITS2). This approach also distinguishes sharpnose sharks from a wide range of other sharks (52 species) and can therefore assist in the regulation of coastal shark fisheries around the world.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Save Our Seas FoundationHai Stiftung/Shark FoundationUNESP São Paulo State Univ, Dept Genet, São Paulo, BrazilNova SE Univ, Save Our Seas Shark Ctr, Dania, FL USANova SE Univ, Oceanog Ctr, Guy Harvey Res Inst, Dania, FL USASUNY Stony Brook, Sch Marine & Atmospher Sci, Stony Brook, NY 11794 USASUNY Stony Brook, Inst Ocean Conservat Sci, Stony Brook, NY 11794 USAUNESP São Paulo State Univ, Dept Morphol, São Paulo, BrazilUNESP São Paulo State Univ, Dept Genet, São Paulo, BrazilUNESP São Paulo State Univ, Dept Morphol, São Paulo, BrazilFAPESP: 07/03067-8FAPESP: 07/03065-5Public Library ScienceUniversidade Estadual Paulista (Unesp)Nova SE UnivSUNY Stony BrookPinhal, Danillo [UNESP]Shivji, Mahmood S.Nachtigall, Pedro G. [UNESP]Chapman, Demian D.Martins, Cesar [UNESP]2014-05-20T13:50:30Z2014-05-20T13:50:30Z2012-04-09info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article6application/pdfhttp://dx.doi.org/10.1371/journal.pone.0034797Plos One. San Francisco: Public Library Science, v. 7, n. 4, p. 6, 2012.1932-6203http://hdl.handle.net/11449/1801910.1371/journal.pone.0034797WOS:000305014500032WOS000305014500032.pdf88588006994253520000-0003-3534-974XWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPLOS ONE2.7661,164info:eu-repo/semantics/openAccess2023-10-18T06:06:53Zoai:repositorio.unesp.br:11449/18019Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:14:59.521267Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon)
title A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon)
spellingShingle A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon)
Pinhal, Danillo [UNESP]
title_short A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon)
title_full A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon)
title_fullStr A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon)
title_full_unstemmed A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon)
title_sort A Streamlined DNA Tool for Global Identification of Heavily Exploited Coastal Shark Species (Genus Rhizoprionodon)
author Pinhal, Danillo [UNESP]
author_facet Pinhal, Danillo [UNESP]
Shivji, Mahmood S.
Nachtigall, Pedro G. [UNESP]
Chapman, Demian D.
Martins, Cesar [UNESP]
author_role author
author2 Shivji, Mahmood S.
Nachtigall, Pedro G. [UNESP]
Chapman, Demian D.
Martins, Cesar [UNESP]
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Nova SE Univ
SUNY Stony Brook
dc.contributor.author.fl_str_mv Pinhal, Danillo [UNESP]
Shivji, Mahmood S.
Nachtigall, Pedro G. [UNESP]
Chapman, Demian D.
Martins, Cesar [UNESP]
description Obtaining accurate species-specific landings data is an essential step toward achieving sustainable shark fisheries. Globally distributed sharpnose sharks (genus Rhizoprionodon) exhibit life-history characteristics (rapid growth, early maturity, annual reproduction) that suggests that they could be fished in a sustainable manner assuming an investment in monitoring, assessment and careful management. However, obtaining species-specific landings data for sharpnose sharks is problematic because they are morphologically very similar to one another. Moreover, sharpnose sharks may also be confused with other small sharks (either small species or juveniles of large species) once they are processed (i.e., the head and fins are removed). Here we present a highly streamlined molecular genetics approach based on seven species-specific PCR primers in a multiplex format that can simultaneously discriminate body parts from the seven described sharpnose shark species commonly occurring in coastal fisheries worldwide. The species-specific primers are based on nucleotide sequence differences among species in the nuclear ribosomal internal transcribed spacer 2 locus (ITS2). This approach also distinguishes sharpnose sharks from a wide range of other sharks (52 species) and can therefore assist in the regulation of coastal shark fisheries around the world.
publishDate 2012
dc.date.none.fl_str_mv 2012-04-09
2014-05-20T13:50:30Z
2014-05-20T13:50:30Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1371/journal.pone.0034797
Plos One. San Francisco: Public Library Science, v. 7, n. 4, p. 6, 2012.
1932-6203
http://hdl.handle.net/11449/18019
10.1371/journal.pone.0034797
WOS:000305014500032
WOS000305014500032.pdf
8858800699425352
0000-0003-3534-974X
url http://dx.doi.org/10.1371/journal.pone.0034797
http://hdl.handle.net/11449/18019
identifier_str_mv Plos One. San Francisco: Public Library Science, v. 7, n. 4, p. 6, 2012.
1932-6203
10.1371/journal.pone.0034797
WOS:000305014500032
WOS000305014500032.pdf
8858800699425352
0000-0003-3534-974X
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv PLOS ONE
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application/pdf
dc.publisher.none.fl_str_mv Public Library Science
publisher.none.fl_str_mv Public Library Science
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
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instname_str Universidade Estadual Paulista (UNESP)
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repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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