Osteoarthritis of the Temporomandibular Joint can be diagnosed earlier using biomarkers and machine learning
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1038/s41598-020-64942-0 http://hdl.handle.net/11449/201760 |
Resumo: | After chronic low back pain, Temporomandibular Joint (TMJ) disorders are the second most common musculoskeletal condition affecting 5 to 12% of the population, with an annual health cost estimated at $4 billion. Chronic disability in TMJ osteoarthritis (OA) increases with aging, and the main goal is to diagnosis before morphological degeneration occurs. Here, we address this challenge using advanced data science to capture, process and analyze 52 clinical, biological and high-resolution CBCT (radiomics) markers from TMJ OA patients and controls. We tested the diagnostic performance of four machine learning models: Logistic Regression, Random Forest, LightGBM, XGBoost. Headaches, Range of mouth opening without pain, Energy, Haralick Correlation, Entropy and interactions of TGF-β1 in Saliva and Headaches, VE-cadherin in Serum and Angiogenin in Saliva, VE-cadherin in Saliva and Headaches, PA1 in Saliva and Headaches, PA1 in Saliva and Range of mouth opening without pain; Gender and Muscle Soreness; Short Run Low Grey Level Emphasis and Headaches, Inverse Difference Moment and Trabecular Separation accurately diagnose early stages of this clinical condition. Our results show the XGBoost + LightGBM model with these features and interactions achieves the accuracy of 0.823, AUC 0.870, and F1-score 0.823 to diagnose the TMJ OA status. Thus, we expect to boost future studies into osteoarthritis patient-specific therapeutic interventions, and thereby improve the health of articular joints. |
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Osteoarthritis of the Temporomandibular Joint can be diagnosed earlier using biomarkers and machine learningAfter chronic low back pain, Temporomandibular Joint (TMJ) disorders are the second most common musculoskeletal condition affecting 5 to 12% of the population, with an annual health cost estimated at $4 billion. Chronic disability in TMJ osteoarthritis (OA) increases with aging, and the main goal is to diagnosis before morphological degeneration occurs. Here, we address this challenge using advanced data science to capture, process and analyze 52 clinical, biological and high-resolution CBCT (radiomics) markers from TMJ OA patients and controls. We tested the diagnostic performance of four machine learning models: Logistic Regression, Random Forest, LightGBM, XGBoost. Headaches, Range of mouth opening without pain, Energy, Haralick Correlation, Entropy and interactions of TGF-β1 in Saliva and Headaches, VE-cadherin in Serum and Angiogenin in Saliva, VE-cadherin in Saliva and Headaches, PA1 in Saliva and Headaches, PA1 in Saliva and Range of mouth opening without pain; Gender and Muscle Soreness; Short Run Low Grey Level Emphasis and Headaches, Inverse Difference Moment and Trabecular Separation accurately diagnose early stages of this clinical condition. Our results show the XGBoost + LightGBM model with these features and interactions achieves the accuracy of 0.823, AUC 0.870, and F1-score 0.823 to diagnose the TMJ OA status. Thus, we expect to boost future studies into osteoarthritis patient-specific therapeutic interventions, and thereby improve the health of articular joints.University of Michigan Department of Orthodontics and Pediatric Dentistry School of DentistrySão Paulo State University (UNESP) Department of Pediatric Dentistry School of DentistryKitware Inc.University of North Carolina Department of Psychiatry and Computer ScienceUniversity of North Carolina Department of BiostatisticsUniversity of Michigan Department of Periodontics and Oral Medicine School of DentistryUniversity of Michigan Department of Oral and Maxillofacial Surgery and Hospital Dentistry School of DentistryUniversity of North Carolina Department of OrthodonticsUniversity of Michigan Center for Integrative Research in Critical Care and Michigan Institute for Data Science Department of Computational Medicine and BioinformaticsSão Paulo State University (UNESP) Department of Pediatric Dentistry School of DentistrySchool of DentistryUniversidade Estadual Paulista (Unesp)Inc.University of North CarolinaCenter for Integrative Research in Critical Care and Michigan Institute for Data ScienceBianchi, Jonas [UNESP]de Oliveira Ruellas, Antônio CarlosGonçalves, João Roberto [UNESP]Paniagua, BeatrizPrieto, Juan CarlosStyner, MartinLi, TengfeiZhu, HongtuSugai, JamesGiannobile, WilliamBenavides, ErikaSoki, FabianaYatabe, MariliaAshman, LawrenceWalker, DavidSoroushmehr, RezaNajarian, KayvanCevidanes, Lucia Helena Soares2020-12-12T02:41:07Z2020-12-12T02:41:07Z2020-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1038/s41598-020-64942-0Scientific Reports, v. 10, n. 1, 2020.2045-2322http://hdl.handle.net/11449/20176010.1038/s41598-020-64942-02-s2.0-85084841584Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengScientific Reportsinfo:eu-repo/semantics/openAccess2024-09-26T14:21:46Zoai:repositorio.unesp.br:11449/201760Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-09-26T14:21:46Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Osteoarthritis of the Temporomandibular Joint can be diagnosed earlier using biomarkers and machine learning |
title |
Osteoarthritis of the Temporomandibular Joint can be diagnosed earlier using biomarkers and machine learning |
spellingShingle |
Osteoarthritis of the Temporomandibular Joint can be diagnosed earlier using biomarkers and machine learning Bianchi, Jonas [UNESP] |
title_short |
Osteoarthritis of the Temporomandibular Joint can be diagnosed earlier using biomarkers and machine learning |
title_full |
Osteoarthritis of the Temporomandibular Joint can be diagnosed earlier using biomarkers and machine learning |
title_fullStr |
Osteoarthritis of the Temporomandibular Joint can be diagnosed earlier using biomarkers and machine learning |
title_full_unstemmed |
Osteoarthritis of the Temporomandibular Joint can be diagnosed earlier using biomarkers and machine learning |
title_sort |
Osteoarthritis of the Temporomandibular Joint can be diagnosed earlier using biomarkers and machine learning |
author |
Bianchi, Jonas [UNESP] |
author_facet |
Bianchi, Jonas [UNESP] de Oliveira Ruellas, Antônio Carlos Gonçalves, João Roberto [UNESP] Paniagua, Beatriz Prieto, Juan Carlos Styner, Martin Li, Tengfei Zhu, Hongtu Sugai, James Giannobile, William Benavides, Erika Soki, Fabiana Yatabe, Marilia Ashman, Lawrence Walker, David Soroushmehr, Reza Najarian, Kayvan Cevidanes, Lucia Helena Soares |
author_role |
author |
author2 |
de Oliveira Ruellas, Antônio Carlos Gonçalves, João Roberto [UNESP] Paniagua, Beatriz Prieto, Juan Carlos Styner, Martin Li, Tengfei Zhu, Hongtu Sugai, James Giannobile, William Benavides, Erika Soki, Fabiana Yatabe, Marilia Ashman, Lawrence Walker, David Soroushmehr, Reza Najarian, Kayvan Cevidanes, Lucia Helena Soares |
author2_role |
author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
School of Dentistry Universidade Estadual Paulista (Unesp) Inc. University of North Carolina Center for Integrative Research in Critical Care and Michigan Institute for Data Science |
dc.contributor.author.fl_str_mv |
Bianchi, Jonas [UNESP] de Oliveira Ruellas, Antônio Carlos Gonçalves, João Roberto [UNESP] Paniagua, Beatriz Prieto, Juan Carlos Styner, Martin Li, Tengfei Zhu, Hongtu Sugai, James Giannobile, William Benavides, Erika Soki, Fabiana Yatabe, Marilia Ashman, Lawrence Walker, David Soroushmehr, Reza Najarian, Kayvan Cevidanes, Lucia Helena Soares |
description |
After chronic low back pain, Temporomandibular Joint (TMJ) disorders are the second most common musculoskeletal condition affecting 5 to 12% of the population, with an annual health cost estimated at $4 billion. Chronic disability in TMJ osteoarthritis (OA) increases with aging, and the main goal is to diagnosis before morphological degeneration occurs. Here, we address this challenge using advanced data science to capture, process and analyze 52 clinical, biological and high-resolution CBCT (radiomics) markers from TMJ OA patients and controls. We tested the diagnostic performance of four machine learning models: Logistic Regression, Random Forest, LightGBM, XGBoost. Headaches, Range of mouth opening without pain, Energy, Haralick Correlation, Entropy and interactions of TGF-β1 in Saliva and Headaches, VE-cadherin in Serum and Angiogenin in Saliva, VE-cadherin in Saliva and Headaches, PA1 in Saliva and Headaches, PA1 in Saliva and Range of mouth opening without pain; Gender and Muscle Soreness; Short Run Low Grey Level Emphasis and Headaches, Inverse Difference Moment and Trabecular Separation accurately diagnose early stages of this clinical condition. Our results show the XGBoost + LightGBM model with these features and interactions achieves the accuracy of 0.823, AUC 0.870, and F1-score 0.823 to diagnose the TMJ OA status. Thus, we expect to boost future studies into osteoarthritis patient-specific therapeutic interventions, and thereby improve the health of articular joints. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-12-12T02:41:07Z 2020-12-12T02:41:07Z 2020-12-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1038/s41598-020-64942-0 Scientific Reports, v. 10, n. 1, 2020. 2045-2322 http://hdl.handle.net/11449/201760 10.1038/s41598-020-64942-0 2-s2.0-85084841584 |
url |
http://dx.doi.org/10.1038/s41598-020-64942-0 http://hdl.handle.net/11449/201760 |
identifier_str_mv |
Scientific Reports, v. 10, n. 1, 2020. 2045-2322 10.1038/s41598-020-64942-0 2-s2.0-85084841584 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Scientific Reports |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
repositoriounesp@unesp.br |
_version_ |
1813546458014547968 |