Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin

Detalhes bibliográficos
Autor(a) principal: de Borba, Rafael Splendore [UNESP]
Data de Publicação: 2013
Outros Autores: Zawadzki, Claudio Henrique, Oliveira, Claudio [UNESP], Perdices, Anabel, Parise-Maltempi, Patrícia Pasquali [UNESP], Alves, Anderson Luis [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/S1679-62252013000100013
http://hdl.handle.net/11449/74271
Resumo: In this study, phylogenetic and phylogeographic analyses of populations identified as Hypostomus strigaticeps from the upper Paraná River basin were conducted in order to test whether these different populations comprises cryptic species or structured populations and to assess their genetic variability. The sequences of the mitochondrial DNA ATP sintetase (subunits 6/8) of 27 specimens from 10 populations (one from Mogi-Guaçu River, five from Paranapanema River, three from Tietê River and one from Peixe River) were analyzed. The phylogeographic analysis showed the existence of eight haplotypes (A-H), and despite the ancestral haplotype includes only individuals from the Tietê River basin, the distribution of H. strigaticeps was not restricted to this basin. Haplotypes A, B and F were the most frequent. Haplotypes D, E, F, G, and H were present in the sub-basin of Paranapanema, two (A and B) were present in the sub-basin of the Tietê River, one (C) was exclusively distributed in the sub-basin of the Peixe River, and one (B) was also present in the sub-basin of the Grande River. The phylogenetic analysis showed that the populations of H. strigaticeps indeed form a monophyletic unit comprising two lineages: TG, with representatives from the Tietê, Mogi-Guaçu and Peixe Rivers; and PP, with specimens from the Paranapanema River. The observed degree of genetic divergence within the TG and PP lineages was 0.1% and 0.2%, respectively, whereas the genetic divergence between the two lineages themselves was approximately 1%. The results of the phylogenetic analysis do not support the hypothesis of existence of crypt species and the phylogeographic analysis confirm the presence of H. strigaticeps in other sub-basins of the upper Paraná River: Grande, Peixe, and Paranapanema sub-basins. © 2013 Sociedade Brasileira de Ictiologia.
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spelling Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basinATPaseBayesian inferenceHaplotypeNested cladePhylogenyIn this study, phylogenetic and phylogeographic analyses of populations identified as Hypostomus strigaticeps from the upper Paraná River basin were conducted in order to test whether these different populations comprises cryptic species or structured populations and to assess their genetic variability. The sequences of the mitochondrial DNA ATP sintetase (subunits 6/8) of 27 specimens from 10 populations (one from Mogi-Guaçu River, five from Paranapanema River, three from Tietê River and one from Peixe River) were analyzed. The phylogeographic analysis showed the existence of eight haplotypes (A-H), and despite the ancestral haplotype includes only individuals from the Tietê River basin, the distribution of H. strigaticeps was not restricted to this basin. Haplotypes A, B and F were the most frequent. Haplotypes D, E, F, G, and H were present in the sub-basin of Paranapanema, two (A and B) were present in the sub-basin of the Tietê River, one (C) was exclusively distributed in the sub-basin of the Peixe River, and one (B) was also present in the sub-basin of the Grande River. The phylogenetic analysis showed that the populations of H. strigaticeps indeed form a monophyletic unit comprising two lineages: TG, with representatives from the Tietê, Mogi-Guaçu and Peixe Rivers; and PP, with specimens from the Paranapanema River. The observed degree of genetic divergence within the TG and PP lineages was 0.1% and 0.2%, respectively, whereas the genetic divergence between the two lineages themselves was approximately 1%. The results of the phylogenetic analysis do not support the hypothesis of existence of crypt species and the phylogeographic analysis confirm the presence of H. strigaticeps in other sub-basins of the upper Paraná River: Grande, Peixe, and Paranapanema sub-basins. © 2013 Sociedade Brasileira de Ictiologia.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Universidade Estadual Paulista Júlio de Mesquita Filho Departamento de Biologia, Laboratório de Citogenética Instituto de Biociências, Rio Claro, São PauloUniversidade Estadual de Maringá Departamento de Biologia, Núcleo de Pesquisas em Limnologia Ictiologia e Aquicultura (Nupélia), Maringá, ParanáUniversidade Estadual Paulista Júlio de Mesquita Filho Departamento de Morfologia, Botucatu, São PauloMuseo Nacional de Ciencias Naturales (CSIC) Departamento de Biodiversidad y Biología Evolutiva, MadridEmbrapa Pesca e Aquicultura (CNPASA), Av JK, conj01, lote 17, Centro 77015-012 Palmas, TocantinsUniversidade Estadual Paulista Júlio de Mesquita Filho Departamento de Biologia, Laboratório de Citogenética Instituto de Biociências, Rio Claro, São PauloUniversidade Estadual Paulista Júlio de Mesquita Filho Departamento de Morfologia, Botucatu, São PauloCNPq: 07/58641-0FAPESP: 07/58641-0Universidade Estadual Paulista (Unesp)Universidade Estadual de Maringá (UEM)Museo Nacional de Ciencias Naturales (CSIC)Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)de Borba, Rafael Splendore [UNESP]Zawadzki, Claudio HenriqueOliveira, Claudio [UNESP]Perdices, AnabelParise-Maltempi, Patrícia Pasquali [UNESP]Alves, Anderson Luis [UNESP]2014-05-27T11:27:31Z2014-05-27T11:27:31Z2013-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article111-116application/pdfhttp://dx.doi.org/10.1590/S1679-62252013000100013Neotropical Ichthyology, v. 11, n. 1, p. 111-116, 2013.1679-6225http://hdl.handle.net/11449/7427110.1590/S1679-62252013000100013S1679-62252013000100013WOS:0003179392000132-s2.0-848763949202-s2.0-84876394920.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengNeotropical Ichthyology1.2160,559info:eu-repo/semantics/openAccess2024-01-03T06:23:50Zoai:repositorio.unesp.br:11449/74271Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-01-03T06:23:50Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin
title Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin
spellingShingle Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin
de Borba, Rafael Splendore [UNESP]
ATPase
Bayesian inference
Haplotype
Nested clade
Phylogeny
title_short Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin
title_full Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin
title_fullStr Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin
title_full_unstemmed Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin
title_sort Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin
author de Borba, Rafael Splendore [UNESP]
author_facet de Borba, Rafael Splendore [UNESP]
Zawadzki, Claudio Henrique
Oliveira, Claudio [UNESP]
Perdices, Anabel
Parise-Maltempi, Patrícia Pasquali [UNESP]
Alves, Anderson Luis [UNESP]
author_role author
author2 Zawadzki, Claudio Henrique
Oliveira, Claudio [UNESP]
Perdices, Anabel
Parise-Maltempi, Patrícia Pasquali [UNESP]
Alves, Anderson Luis [UNESP]
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade Estadual de Maringá (UEM)
Museo Nacional de Ciencias Naturales (CSIC)
Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)
dc.contributor.author.fl_str_mv de Borba, Rafael Splendore [UNESP]
Zawadzki, Claudio Henrique
Oliveira, Claudio [UNESP]
Perdices, Anabel
Parise-Maltempi, Patrícia Pasquali [UNESP]
Alves, Anderson Luis [UNESP]
dc.subject.por.fl_str_mv ATPase
Bayesian inference
Haplotype
Nested clade
Phylogeny
topic ATPase
Bayesian inference
Haplotype
Nested clade
Phylogeny
description In this study, phylogenetic and phylogeographic analyses of populations identified as Hypostomus strigaticeps from the upper Paraná River basin were conducted in order to test whether these different populations comprises cryptic species or structured populations and to assess their genetic variability. The sequences of the mitochondrial DNA ATP sintetase (subunits 6/8) of 27 specimens from 10 populations (one from Mogi-Guaçu River, five from Paranapanema River, three from Tietê River and one from Peixe River) were analyzed. The phylogeographic analysis showed the existence of eight haplotypes (A-H), and despite the ancestral haplotype includes only individuals from the Tietê River basin, the distribution of H. strigaticeps was not restricted to this basin. Haplotypes A, B and F were the most frequent. Haplotypes D, E, F, G, and H were present in the sub-basin of Paranapanema, two (A and B) were present in the sub-basin of the Tietê River, one (C) was exclusively distributed in the sub-basin of the Peixe River, and one (B) was also present in the sub-basin of the Grande River. The phylogenetic analysis showed that the populations of H. strigaticeps indeed form a monophyletic unit comprising two lineages: TG, with representatives from the Tietê, Mogi-Guaçu and Peixe Rivers; and PP, with specimens from the Paranapanema River. The observed degree of genetic divergence within the TG and PP lineages was 0.1% and 0.2%, respectively, whereas the genetic divergence between the two lineages themselves was approximately 1%. The results of the phylogenetic analysis do not support the hypothesis of existence of crypt species and the phylogeographic analysis confirm the presence of H. strigaticeps in other sub-basins of the upper Paraná River: Grande, Peixe, and Paranapanema sub-basins. © 2013 Sociedade Brasileira de Ictiologia.
publishDate 2013
dc.date.none.fl_str_mv 2013-01-01
2014-05-27T11:27:31Z
2014-05-27T11:27:31Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/S1679-62252013000100013
Neotropical Ichthyology, v. 11, n. 1, p. 111-116, 2013.
1679-6225
http://hdl.handle.net/11449/74271
10.1590/S1679-62252013000100013
S1679-62252013000100013
WOS:000317939200013
2-s2.0-84876394920
2-s2.0-84876394920.pdf
url http://dx.doi.org/10.1590/S1679-62252013000100013
http://hdl.handle.net/11449/74271
identifier_str_mv Neotropical Ichthyology, v. 11, n. 1, p. 111-116, 2013.
1679-6225
10.1590/S1679-62252013000100013
S1679-62252013000100013
WOS:000317939200013
2-s2.0-84876394920
2-s2.0-84876394920.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Neotropical Ichthyology
1.216
0,559
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 111-116
application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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