Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1590/S1679-62252013000100013 http://hdl.handle.net/11449/74271 |
Resumo: | In this study, phylogenetic and phylogeographic analyses of populations identified as Hypostomus strigaticeps from the upper Paraná River basin were conducted in order to test whether these different populations comprises cryptic species or structured populations and to assess their genetic variability. The sequences of the mitochondrial DNA ATP sintetase (subunits 6/8) of 27 specimens from 10 populations (one from Mogi-Guaçu River, five from Paranapanema River, three from Tietê River and one from Peixe River) were analyzed. The phylogeographic analysis showed the existence of eight haplotypes (A-H), and despite the ancestral haplotype includes only individuals from the Tietê River basin, the distribution of H. strigaticeps was not restricted to this basin. Haplotypes A, B and F were the most frequent. Haplotypes D, E, F, G, and H were present in the sub-basin of Paranapanema, two (A and B) were present in the sub-basin of the Tietê River, one (C) was exclusively distributed in the sub-basin of the Peixe River, and one (B) was also present in the sub-basin of the Grande River. The phylogenetic analysis showed that the populations of H. strigaticeps indeed form a monophyletic unit comprising two lineages: TG, with representatives from the Tietê, Mogi-Guaçu and Peixe Rivers; and PP, with specimens from the Paranapanema River. The observed degree of genetic divergence within the TG and PP lineages was 0.1% and 0.2%, respectively, whereas the genetic divergence between the two lineages themselves was approximately 1%. The results of the phylogenetic analysis do not support the hypothesis of existence of crypt species and the phylogeographic analysis confirm the presence of H. strigaticeps in other sub-basins of the upper Paraná River: Grande, Peixe, and Paranapanema sub-basins. © 2013 Sociedade Brasileira de Ictiologia. |
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Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basinATPaseBayesian inferenceHaplotypeNested cladePhylogenyIn this study, phylogenetic and phylogeographic analyses of populations identified as Hypostomus strigaticeps from the upper Paraná River basin were conducted in order to test whether these different populations comprises cryptic species or structured populations and to assess their genetic variability. The sequences of the mitochondrial DNA ATP sintetase (subunits 6/8) of 27 specimens from 10 populations (one from Mogi-Guaçu River, five from Paranapanema River, three from Tietê River and one from Peixe River) were analyzed. The phylogeographic analysis showed the existence of eight haplotypes (A-H), and despite the ancestral haplotype includes only individuals from the Tietê River basin, the distribution of H. strigaticeps was not restricted to this basin. Haplotypes A, B and F were the most frequent. Haplotypes D, E, F, G, and H were present in the sub-basin of Paranapanema, two (A and B) were present in the sub-basin of the Tietê River, one (C) was exclusively distributed in the sub-basin of the Peixe River, and one (B) was also present in the sub-basin of the Grande River. The phylogenetic analysis showed that the populations of H. strigaticeps indeed form a monophyletic unit comprising two lineages: TG, with representatives from the Tietê, Mogi-Guaçu and Peixe Rivers; and PP, with specimens from the Paranapanema River. The observed degree of genetic divergence within the TG and PP lineages was 0.1% and 0.2%, respectively, whereas the genetic divergence between the two lineages themselves was approximately 1%. The results of the phylogenetic analysis do not support the hypothesis of existence of crypt species and the phylogeographic analysis confirm the presence of H. strigaticeps in other sub-basins of the upper Paraná River: Grande, Peixe, and Paranapanema sub-basins. © 2013 Sociedade Brasileira de Ictiologia.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Universidade Estadual Paulista Júlio de Mesquita Filho Departamento de Biologia, Laboratório de Citogenética Instituto de Biociências, Rio Claro, São PauloUniversidade Estadual de Maringá Departamento de Biologia, Núcleo de Pesquisas em Limnologia Ictiologia e Aquicultura (Nupélia), Maringá, ParanáUniversidade Estadual Paulista Júlio de Mesquita Filho Departamento de Morfologia, Botucatu, São PauloMuseo Nacional de Ciencias Naturales (CSIC) Departamento de Biodiversidad y Biología Evolutiva, MadridEmbrapa Pesca e Aquicultura (CNPASA), Av JK, conj01, lote 17, Centro 77015-012 Palmas, TocantinsUniversidade Estadual Paulista Júlio de Mesquita Filho Departamento de Biologia, Laboratório de Citogenética Instituto de Biociências, Rio Claro, São PauloUniversidade Estadual Paulista Júlio de Mesquita Filho Departamento de Morfologia, Botucatu, São PauloCNPq: 07/58641-0FAPESP: 07/58641-0Universidade Estadual Paulista (Unesp)Universidade Estadual de Maringá (UEM)Museo Nacional de Ciencias Naturales (CSIC)Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)de Borba, Rafael Splendore [UNESP]Zawadzki, Claudio HenriqueOliveira, Claudio [UNESP]Perdices, AnabelParise-Maltempi, Patrícia Pasquali [UNESP]Alves, Anderson Luis [UNESP]2014-05-27T11:27:31Z2014-05-27T11:27:31Z2013-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article111-116application/pdfhttp://dx.doi.org/10.1590/S1679-62252013000100013Neotropical Ichthyology, v. 11, n. 1, p. 111-116, 2013.1679-6225http://hdl.handle.net/11449/7427110.1590/S1679-62252013000100013S1679-62252013000100013WOS:0003179392000132-s2.0-848763949202-s2.0-84876394920.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengNeotropical Ichthyology1.2160,559info:eu-repo/semantics/openAccess2024-01-03T06:23:50Zoai:repositorio.unesp.br:11449/74271Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:02:28.159461Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin |
title |
Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin |
spellingShingle |
Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin de Borba, Rafael Splendore [UNESP] ATPase Bayesian inference Haplotype Nested clade Phylogeny |
title_short |
Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin |
title_full |
Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin |
title_fullStr |
Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin |
title_full_unstemmed |
Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin |
title_sort |
Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin |
author |
de Borba, Rafael Splendore [UNESP] |
author_facet |
de Borba, Rafael Splendore [UNESP] Zawadzki, Claudio Henrique Oliveira, Claudio [UNESP] Perdices, Anabel Parise-Maltempi, Patrícia Pasquali [UNESP] Alves, Anderson Luis [UNESP] |
author_role |
author |
author2 |
Zawadzki, Claudio Henrique Oliveira, Claudio [UNESP] Perdices, Anabel Parise-Maltempi, Patrícia Pasquali [UNESP] Alves, Anderson Luis [UNESP] |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidade Estadual de Maringá (UEM) Museo Nacional de Ciencias Naturales (CSIC) Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA) |
dc.contributor.author.fl_str_mv |
de Borba, Rafael Splendore [UNESP] Zawadzki, Claudio Henrique Oliveira, Claudio [UNESP] Perdices, Anabel Parise-Maltempi, Patrícia Pasquali [UNESP] Alves, Anderson Luis [UNESP] |
dc.subject.por.fl_str_mv |
ATPase Bayesian inference Haplotype Nested clade Phylogeny |
topic |
ATPase Bayesian inference Haplotype Nested clade Phylogeny |
description |
In this study, phylogenetic and phylogeographic analyses of populations identified as Hypostomus strigaticeps from the upper Paraná River basin were conducted in order to test whether these different populations comprises cryptic species or structured populations and to assess their genetic variability. The sequences of the mitochondrial DNA ATP sintetase (subunits 6/8) of 27 specimens from 10 populations (one from Mogi-Guaçu River, five from Paranapanema River, three from Tietê River and one from Peixe River) were analyzed. The phylogeographic analysis showed the existence of eight haplotypes (A-H), and despite the ancestral haplotype includes only individuals from the Tietê River basin, the distribution of H. strigaticeps was not restricted to this basin. Haplotypes A, B and F were the most frequent. Haplotypes D, E, F, G, and H were present in the sub-basin of Paranapanema, two (A and B) were present in the sub-basin of the Tietê River, one (C) was exclusively distributed in the sub-basin of the Peixe River, and one (B) was also present in the sub-basin of the Grande River. The phylogenetic analysis showed that the populations of H. strigaticeps indeed form a monophyletic unit comprising two lineages: TG, with representatives from the Tietê, Mogi-Guaçu and Peixe Rivers; and PP, with specimens from the Paranapanema River. The observed degree of genetic divergence within the TG and PP lineages was 0.1% and 0.2%, respectively, whereas the genetic divergence between the two lineages themselves was approximately 1%. The results of the phylogenetic analysis do not support the hypothesis of existence of crypt species and the phylogeographic analysis confirm the presence of H. strigaticeps in other sub-basins of the upper Paraná River: Grande, Peixe, and Paranapanema sub-basins. © 2013 Sociedade Brasileira de Ictiologia. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013-01-01 2014-05-27T11:27:31Z 2014-05-27T11:27:31Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/S1679-62252013000100013 Neotropical Ichthyology, v. 11, n. 1, p. 111-116, 2013. 1679-6225 http://hdl.handle.net/11449/74271 10.1590/S1679-62252013000100013 S1679-62252013000100013 WOS:000317939200013 2-s2.0-84876394920 2-s2.0-84876394920.pdf |
url |
http://dx.doi.org/10.1590/S1679-62252013000100013 http://hdl.handle.net/11449/74271 |
identifier_str_mv |
Neotropical Ichthyology, v. 11, n. 1, p. 111-116, 2013. 1679-6225 10.1590/S1679-62252013000100013 S1679-62252013000100013 WOS:000317939200013 2-s2.0-84876394920 2-s2.0-84876394920.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Neotropical Ichthyology 1.216 0,559 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
111-116 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129385705766912 |