Identification and sequence analysis of five allexiviruses species infecting garlic crops in Brazil
Autor(a) principal: | |
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Data de Publicação: | 2014 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1590/S1982-56762014000600011 http://hdl.handle.net/11449/114418 |
Resumo: | Garlic plants are naturally infected by a mixture of viruses, including allexiviruses. Symptomatic garlic plants with mosaic and distorted leaves from garlic producing regions in Brazil were analyzed for the presence of Garlic virus A (GarV-A), Garlic virus B (GarV-B), Garlic virus C (GarV-C), Garlic virus D (GarV-D) and Garlic mite-borne filamentous virus (GarMbFV), five allexivirus species previously reported in the country. Fifty-nine virus isolates from five distinct allexivirus species were identified and the complete coat protein region of each genome was sequenced. Mixed infections were very frequent and corresponded to 43% of the positive samples. The nucleotide identity of the coat protein ranged between 75% and 98% for GarV-A isolates, 83% and 90% for GarV-B, 69% and 98% for GarV-C, 87% and 97% for GarV-D, and 72% and 91% for GarMbFV. |
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Repositório Institucional da UNESP |
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Identification and sequence analysis of five allexiviruses species infecting garlic crops in BrazilAllium sativummixed infectionvariabilityvirusGarlic plants are naturally infected by a mixture of viruses, including allexiviruses. Symptomatic garlic plants with mosaic and distorted leaves from garlic producing regions in Brazil were analyzed for the presence of Garlic virus A (GarV-A), Garlic virus B (GarV-B), Garlic virus C (GarV-C), Garlic virus D (GarV-D) and Garlic mite-borne filamentous virus (GarMbFV), five allexivirus species previously reported in the country. Fifty-nine virus isolates from five distinct allexivirus species were identified and the complete coat protein region of each genome was sequenced. Mixed infections were very frequent and corresponded to 43% of the positive samples. The nucleotide identity of the coat protein ranged between 75% and 98% for GarV-A isolates, 83% and 90% for GarV-B, 69% and 98% for GarV-C, 87% and 97% for GarV-D, and 72% and 91% for GarMbFV.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Universidade Estadual de São Paulo Faculdade de Ciências Agronômicas Departamento de Produção VegetalSociedade Brasileira de FitopatologiaUniversidade Estadual de São Paulo Faculdade de Ciências Agronômicas Departamento de Produção VegetalOliveira, Milena L. [UNESP]De Marchi, Bruno R. [UNESP]Mituti, Tatiana [UNESP]Pavan, Marcelo A. [UNESP]Krause-sakate, Renate [UNESP]2015-02-02T12:39:31Z2015-02-02T12:39:31Z2014-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article483-489application/pdfhttp://dx.doi.org/10.1590/S1982-56762014000600011Tropical Plant Pathology. Sociedade Brasileira de Fitopatologia, v. 39, n. 6, p. 483-489, 2014.1982-5676http://hdl.handle.net/11449/11441810.1590/S1982-56762014000600011S1982-56762014000600011S1982-56762014000600011.pdf9475664563362949SciELOreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengTropical Plant Pathology0,401info:eu-repo/semantics/openAccess2024-04-30T15:59:41Zoai:repositorio.unesp.br:11449/114418Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T23:03:22.803887Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Identification and sequence analysis of five allexiviruses species infecting garlic crops in Brazil |
title |
Identification and sequence analysis of five allexiviruses species infecting garlic crops in Brazil |
spellingShingle |
Identification and sequence analysis of five allexiviruses species infecting garlic crops in Brazil Oliveira, Milena L. [UNESP] Allium sativum mixed infection variability virus |
title_short |
Identification and sequence analysis of five allexiviruses species infecting garlic crops in Brazil |
title_full |
Identification and sequence analysis of five allexiviruses species infecting garlic crops in Brazil |
title_fullStr |
Identification and sequence analysis of five allexiviruses species infecting garlic crops in Brazil |
title_full_unstemmed |
Identification and sequence analysis of five allexiviruses species infecting garlic crops in Brazil |
title_sort |
Identification and sequence analysis of five allexiviruses species infecting garlic crops in Brazil |
author |
Oliveira, Milena L. [UNESP] |
author_facet |
Oliveira, Milena L. [UNESP] De Marchi, Bruno R. [UNESP] Mituti, Tatiana [UNESP] Pavan, Marcelo A. [UNESP] Krause-sakate, Renate [UNESP] |
author_role |
author |
author2 |
De Marchi, Bruno R. [UNESP] Mituti, Tatiana [UNESP] Pavan, Marcelo A. [UNESP] Krause-sakate, Renate [UNESP] |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual de São Paulo Faculdade de Ciências Agronômicas Departamento de Produção Vegetal |
dc.contributor.author.fl_str_mv |
Oliveira, Milena L. [UNESP] De Marchi, Bruno R. [UNESP] Mituti, Tatiana [UNESP] Pavan, Marcelo A. [UNESP] Krause-sakate, Renate [UNESP] |
dc.subject.por.fl_str_mv |
Allium sativum mixed infection variability virus |
topic |
Allium sativum mixed infection variability virus |
description |
Garlic plants are naturally infected by a mixture of viruses, including allexiviruses. Symptomatic garlic plants with mosaic and distorted leaves from garlic producing regions in Brazil were analyzed for the presence of Garlic virus A (GarV-A), Garlic virus B (GarV-B), Garlic virus C (GarV-C), Garlic virus D (GarV-D) and Garlic mite-borne filamentous virus (GarMbFV), five allexivirus species previously reported in the country. Fifty-nine virus isolates from five distinct allexivirus species were identified and the complete coat protein region of each genome was sequenced. Mixed infections were very frequent and corresponded to 43% of the positive samples. The nucleotide identity of the coat protein ranged between 75% and 98% for GarV-A isolates, 83% and 90% for GarV-B, 69% and 98% for GarV-C, 87% and 97% for GarV-D, and 72% and 91% for GarMbFV. |
publishDate |
2014 |
dc.date.none.fl_str_mv |
2014-12-01 2015-02-02T12:39:31Z 2015-02-02T12:39:31Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/S1982-56762014000600011 Tropical Plant Pathology. Sociedade Brasileira de Fitopatologia, v. 39, n. 6, p. 483-489, 2014. 1982-5676 http://hdl.handle.net/11449/114418 10.1590/S1982-56762014000600011 S1982-56762014000600011 S1982-56762014000600011.pdf 9475664563362949 |
url |
http://dx.doi.org/10.1590/S1982-56762014000600011 http://hdl.handle.net/11449/114418 |
identifier_str_mv |
Tropical Plant Pathology. Sociedade Brasileira de Fitopatologia, v. 39, n. 6, p. 483-489, 2014. 1982-5676 10.1590/S1982-56762014000600011 S1982-56762014000600011 S1982-56762014000600011.pdf 9475664563362949 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Tropical Plant Pathology 0,401 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
483-489 application/pdf |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Fitopatologia |
publisher.none.fl_str_mv |
Sociedade Brasileira de Fitopatologia |
dc.source.none.fl_str_mv |
SciELO reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129485293223936 |