PRP8 intein in cryptic species of Histoplasma capsulatum: Evolution and phylogeny

Detalhes bibliográficos
Autor(a) principal: Theodoro, Raquel Cordeiro
Data de Publicação: 2013
Outros Autores: Scheel, Christina M., Brandt, Mary E., Kasuga, Takao, Bagagli, Eduardo [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.meegid.2013.05.001
http://hdl.handle.net/11449/76140
Resumo: The PRP8 intein is the most widespread intein among the Kingdom Fungi. This genetic element occurs within the prp8 gene, and is transcribed and translated simultaneously with the gene. After translation, the intein excises itself from the Prp8 protein by an autocatalytic splicing reaction, subsequently joining the N and C terminals of the host protein, which retains its functional conformation. Besides the splicing domain, some PRP8 inteins also have a homing endonuclease (HE) domain which, if functional, makes the intein a mobile element capable of becoming fixed in a population. This work aimed to study (1) The occurrence of this intein in Histoplasma capsulatum isolates (n=. 99) belonging to different cryptic species collected in diverse geographical locations, and (2) The functionality of the endonuclease domains of H. capsulatum PRP8 inteins and their phylogenetic relationship among the cryptic species. Our results suggest that the PRP8 intein is fixed in H. capsulatum populations and that an admixture or a probable ancestral polymorphism of the PRP8 intein sequences is responsible for the apparent paraphyletic pattern of the LAmA clade which, in the intein phylogeny, also encompasses sequences from LAmB isolates. The PRP8 intein sequences clearly separate the different cryptic species, and may serve as an additional molecular typing tool, as previously proposed for other fungi genus, such as Cryptococcus and Paracoccidioides. © 2013 Elsevier B.V.
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spelling PRP8 intein in cryptic species of Histoplasma capsulatum: Evolution and phylogenyHistoplasma capsulatumLatin AmericaPhylogenyPRP8 inteinendonucleaseinteinunclassified drugamino acid sequencecladisticscontrolled studyenzyme activityenzyme structurefungus isolationgeographic distributionmolecular evolutionmultilocus sequence typingnonhumannucleotide sequencephylogenypriority journalprotein processingsequence alignmentspecies differenceThe PRP8 intein is the most widespread intein among the Kingdom Fungi. This genetic element occurs within the prp8 gene, and is transcribed and translated simultaneously with the gene. After translation, the intein excises itself from the Prp8 protein by an autocatalytic splicing reaction, subsequently joining the N and C terminals of the host protein, which retains its functional conformation. Besides the splicing domain, some PRP8 inteins also have a homing endonuclease (HE) domain which, if functional, makes the intein a mobile element capable of becoming fixed in a population. This work aimed to study (1) The occurrence of this intein in Histoplasma capsulatum isolates (n=. 99) belonging to different cryptic species collected in diverse geographical locations, and (2) The functionality of the endonuclease domains of H. capsulatum PRP8 inteins and their phylogenetic relationship among the cryptic species. Our results suggest that the PRP8 intein is fixed in H. capsulatum populations and that an admixture or a probable ancestral polymorphism of the PRP8 intein sequences is responsible for the apparent paraphyletic pattern of the LAmA clade which, in the intein phylogeny, also encompasses sequences from LAmB isolates. The PRP8 intein sequences clearly separate the different cryptic species, and may serve as an additional molecular typing tool, as previously proposed for other fungi genus, such as Cryptococcus and Paracoccidioides. © 2013 Elsevier B.V.Universidade Federal do Rio Grande do Norte (UFRN), Campus de Natal, RNMycotic Diseases Branch Centers for Disease Control and Prevention (CDC), Atlanta, GAUnited States Dept. of Agriculture-Agricultural Research Service (USDA-ARS), Davis, CAUniversidade Estadual Paulista (UNESP), Campus de Botucatu, SPUniversidade Estadual Paulista (UNESP), Campus de Botucatu, SPUniversidade Federal do Rio Grande do Norte (UFRN)Centers for Disease Control and Prevention (CDC)United States Dept. of Agriculture-Agricultural Research Service (USDA-ARS)Universidade Estadual Paulista (Unesp)Theodoro, Raquel CordeiroScheel, Christina M.Brandt, Mary E.Kasuga, TakaoBagagli, Eduardo [UNESP]2014-05-27T11:30:05Z2014-05-27T11:30:05Z2013-08-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article174-182application/pdfhttp://dx.doi.org/10.1016/j.meegid.2013.05.001Infection, Genetics and Evolution, v. 18, p. 174-182.1567-13481567-7257http://hdl.handle.net/11449/7614010.1016/j.meegid.2013.05.0012-s2.0-848793878152-s2.0-84879387815.pdf33203275704295390000-0002-8003-41090000-0002-8003-4109Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengInfection, Genetics and Evolution2.5451,278info:eu-repo/semantics/openAccess2023-11-13T06:14:49Zoai:repositorio.unesp.br:11449/76140Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-11-13T06:14:49Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv PRP8 intein in cryptic species of Histoplasma capsulatum: Evolution and phylogeny
title PRP8 intein in cryptic species of Histoplasma capsulatum: Evolution and phylogeny
spellingShingle PRP8 intein in cryptic species of Histoplasma capsulatum: Evolution and phylogeny
Theodoro, Raquel Cordeiro
Histoplasma capsulatum
Latin America
Phylogeny
PRP8 intein
endonuclease
intein
unclassified drug
amino acid sequence
cladistics
controlled study
enzyme activity
enzyme structure
fungus isolation
geographic distribution
molecular evolution
multilocus sequence typing
nonhuman
nucleotide sequence
phylogeny
priority journal
protein processing
sequence alignment
species difference
title_short PRP8 intein in cryptic species of Histoplasma capsulatum: Evolution and phylogeny
title_full PRP8 intein in cryptic species of Histoplasma capsulatum: Evolution and phylogeny
title_fullStr PRP8 intein in cryptic species of Histoplasma capsulatum: Evolution and phylogeny
title_full_unstemmed PRP8 intein in cryptic species of Histoplasma capsulatum: Evolution and phylogeny
title_sort PRP8 intein in cryptic species of Histoplasma capsulatum: Evolution and phylogeny
author Theodoro, Raquel Cordeiro
author_facet Theodoro, Raquel Cordeiro
Scheel, Christina M.
Brandt, Mary E.
Kasuga, Takao
Bagagli, Eduardo [UNESP]
author_role author
author2 Scheel, Christina M.
Brandt, Mary E.
Kasuga, Takao
Bagagli, Eduardo [UNESP]
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal do Rio Grande do Norte (UFRN)
Centers for Disease Control and Prevention (CDC)
United States Dept. of Agriculture-Agricultural Research Service (USDA-ARS)
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Theodoro, Raquel Cordeiro
Scheel, Christina M.
Brandt, Mary E.
Kasuga, Takao
Bagagli, Eduardo [UNESP]
dc.subject.por.fl_str_mv Histoplasma capsulatum
Latin America
Phylogeny
PRP8 intein
endonuclease
intein
unclassified drug
amino acid sequence
cladistics
controlled study
enzyme activity
enzyme structure
fungus isolation
geographic distribution
molecular evolution
multilocus sequence typing
nonhuman
nucleotide sequence
phylogeny
priority journal
protein processing
sequence alignment
species difference
topic Histoplasma capsulatum
Latin America
Phylogeny
PRP8 intein
endonuclease
intein
unclassified drug
amino acid sequence
cladistics
controlled study
enzyme activity
enzyme structure
fungus isolation
geographic distribution
molecular evolution
multilocus sequence typing
nonhuman
nucleotide sequence
phylogeny
priority journal
protein processing
sequence alignment
species difference
description The PRP8 intein is the most widespread intein among the Kingdom Fungi. This genetic element occurs within the prp8 gene, and is transcribed and translated simultaneously with the gene. After translation, the intein excises itself from the Prp8 protein by an autocatalytic splicing reaction, subsequently joining the N and C terminals of the host protein, which retains its functional conformation. Besides the splicing domain, some PRP8 inteins also have a homing endonuclease (HE) domain which, if functional, makes the intein a mobile element capable of becoming fixed in a population. This work aimed to study (1) The occurrence of this intein in Histoplasma capsulatum isolates (n=. 99) belonging to different cryptic species collected in diverse geographical locations, and (2) The functionality of the endonuclease domains of H. capsulatum PRP8 inteins and their phylogenetic relationship among the cryptic species. Our results suggest that the PRP8 intein is fixed in H. capsulatum populations and that an admixture or a probable ancestral polymorphism of the PRP8 intein sequences is responsible for the apparent paraphyletic pattern of the LAmA clade which, in the intein phylogeny, also encompasses sequences from LAmB isolates. The PRP8 intein sequences clearly separate the different cryptic species, and may serve as an additional molecular typing tool, as previously proposed for other fungi genus, such as Cryptococcus and Paracoccidioides. © 2013 Elsevier B.V.
publishDate 2013
dc.date.none.fl_str_mv 2013-08-01
2014-05-27T11:30:05Z
2014-05-27T11:30:05Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.meegid.2013.05.001
Infection, Genetics and Evolution, v. 18, p. 174-182.
1567-1348
1567-7257
http://hdl.handle.net/11449/76140
10.1016/j.meegid.2013.05.001
2-s2.0-84879387815
2-s2.0-84879387815.pdf
3320327570429539
0000-0002-8003-4109
0000-0002-8003-4109
url http://dx.doi.org/10.1016/j.meegid.2013.05.001
http://hdl.handle.net/11449/76140
identifier_str_mv Infection, Genetics and Evolution, v. 18, p. 174-182.
1567-1348
1567-7257
10.1016/j.meegid.2013.05.001
2-s2.0-84879387815
2-s2.0-84879387815.pdf
3320327570429539
0000-0002-8003-4109
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Infection, Genetics and Evolution
2.545
1,278
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 174-182
application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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