Paternity identification in sugarcane polycrosses by using microsatellite markers
Autor(a) principal: | |
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Data de Publicação: | 2014 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.4238/2014.March.31.7 http://hdl.handle.net/11449/112279 |
Resumo: | Although polycrosses have been used to test the potential of cross-combination of a large number of sugarcane parents, the male parent of the half-sib progenies produced is unknown. The present study aimed to integrate the molecular marker technology to the sugarcane polycross approach by the application of microsatellite markers to identify the male parent of 41 elite clones derived from polycross families. Ten microsatellite [single sequence repeats (SSRs)] primer pairs were used to identify the most likely male parent considering markers present in the selected clone but absent in the female parent. The number of alleles generated by the 10 microsatellite primer pairs ranged from 102 (cross-pollination lantern 4) to 120 (cross-pollination lantern 2) with an average of 113.25 alleles per SSR. The average genetic similarity among the involved parents in the polycrosses was 45.9%. The results of the analysis of the SSR markers absent in the female parent and present only in the selected clone as well as the genetic similarity values allowed the identification of the most likely male parent in 73% of the total clones evaluated and also to detect probable contaminations. The obtained results highlight the importance of using molecular marker technology in the identification and confirmation of the male parent of high-performance clones derived from polycrosses in the sugarcane breeding programs. |
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Repositório Institucional da UNESP |
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Paternity identification in sugarcane polycrosses by using microsatellite markersProgeniesSugarcane breedingGenetic dissimilarityAlthough polycrosses have been used to test the potential of cross-combination of a large number of sugarcane parents, the male parent of the half-sib progenies produced is unknown. The present study aimed to integrate the molecular marker technology to the sugarcane polycross approach by the application of microsatellite markers to identify the male parent of 41 elite clones derived from polycross families. Ten microsatellite [single sequence repeats (SSRs)] primer pairs were used to identify the most likely male parent considering markers present in the selected clone but absent in the female parent. The number of alleles generated by the 10 microsatellite primer pairs ranged from 102 (cross-pollination lantern 4) to 120 (cross-pollination lantern 2) with an average of 113.25 alleles per SSR. The average genetic similarity among the involved parents in the polycrosses was 45.9%. The results of the analysis of the SSR markers absent in the female parent and present only in the selected clone as well as the genetic similarity values allowed the identification of the most likely male parent in 73% of the total clones evaluated and also to detect probable contaminations. The obtained results highlight the importance of using molecular marker technology in the identification and confirmation of the male parent of high-performance clones derived from polycrosses in the sugarcane breeding programs.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)IAC (Instituto Agronomico de Campinas)Ctr Avancado Pesquisa Tecnol Agronegocio Cana IAC, Ribeirao Preto, SP, BrazilUniv Estadual Paulista, Fac Ciencias Agr Vet, Dept Ciencias Exatas, Jaboticabal, SP, BrazilPRDTA Ctr Sul APTA, Piracicaba, SP, BrazilUniv Estadual Paulista, Fac Ciencias Agr Vet, Dept Ciencias Exatas, Jaboticabal, SP, BrazilFAPESP: 08/56146-5Funpec-editoraCtr Avancado Pesquisa Tecnol Agronegocio Cana IACUniversidade Estadual Paulista (Unesp)Agência Paulista de Tecnologia dos Agronegócios (APTA)Xavier, M. A.Pinto, L. R.Favero, T. M.Perecin, D. [UNESP]Carlini-Garcia, L. A.Landell, M. G. A.2014-12-03T13:10:35Z2014-12-03T13:10:35Z2014-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article2268-2277application/pdfhttp://dx.doi.org/10.4238/2014.March.31.7Genetics And Molecular Research. Ribeirao Preto: Funpec-editora, v. 13, n. 1, p. 2268-2277, 2014.1676-5680http://hdl.handle.net/11449/11227910.4238/2014.March.31.7WOS:000334114800152WOS000334114800152.pdf7087372884726559Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics and Molecular Research0,439info:eu-repo/semantics/openAccess2024-06-06T13:43:43Zoai:repositorio.unesp.br:11449/112279Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T21:29:10.776568Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Paternity identification in sugarcane polycrosses by using microsatellite markers |
title |
Paternity identification in sugarcane polycrosses by using microsatellite markers |
spellingShingle |
Paternity identification in sugarcane polycrosses by using microsatellite markers Xavier, M. A. Progenies Sugarcane breeding Genetic dissimilarity |
title_short |
Paternity identification in sugarcane polycrosses by using microsatellite markers |
title_full |
Paternity identification in sugarcane polycrosses by using microsatellite markers |
title_fullStr |
Paternity identification in sugarcane polycrosses by using microsatellite markers |
title_full_unstemmed |
Paternity identification in sugarcane polycrosses by using microsatellite markers |
title_sort |
Paternity identification in sugarcane polycrosses by using microsatellite markers |
author |
Xavier, M. A. |
author_facet |
Xavier, M. A. Pinto, L. R. Favero, T. M. Perecin, D. [UNESP] Carlini-Garcia, L. A. Landell, M. G. A. |
author_role |
author |
author2 |
Pinto, L. R. Favero, T. M. Perecin, D. [UNESP] Carlini-Garcia, L. A. Landell, M. G. A. |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Ctr Avancado Pesquisa Tecnol Agronegocio Cana IAC Universidade Estadual Paulista (Unesp) Agência Paulista de Tecnologia dos Agronegócios (APTA) |
dc.contributor.author.fl_str_mv |
Xavier, M. A. Pinto, L. R. Favero, T. M. Perecin, D. [UNESP] Carlini-Garcia, L. A. Landell, M. G. A. |
dc.subject.por.fl_str_mv |
Progenies Sugarcane breeding Genetic dissimilarity |
topic |
Progenies Sugarcane breeding Genetic dissimilarity |
description |
Although polycrosses have been used to test the potential of cross-combination of a large number of sugarcane parents, the male parent of the half-sib progenies produced is unknown. The present study aimed to integrate the molecular marker technology to the sugarcane polycross approach by the application of microsatellite markers to identify the male parent of 41 elite clones derived from polycross families. Ten microsatellite [single sequence repeats (SSRs)] primer pairs were used to identify the most likely male parent considering markers present in the selected clone but absent in the female parent. The number of alleles generated by the 10 microsatellite primer pairs ranged from 102 (cross-pollination lantern 4) to 120 (cross-pollination lantern 2) with an average of 113.25 alleles per SSR. The average genetic similarity among the involved parents in the polycrosses was 45.9%. The results of the analysis of the SSR markers absent in the female parent and present only in the selected clone as well as the genetic similarity values allowed the identification of the most likely male parent in 73% of the total clones evaluated and also to detect probable contaminations. The obtained results highlight the importance of using molecular marker technology in the identification and confirmation of the male parent of high-performance clones derived from polycrosses in the sugarcane breeding programs. |
publishDate |
2014 |
dc.date.none.fl_str_mv |
2014-12-03T13:10:35Z 2014-12-03T13:10:35Z 2014-01-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.4238/2014.March.31.7 Genetics And Molecular Research. Ribeirao Preto: Funpec-editora, v. 13, n. 1, p. 2268-2277, 2014. 1676-5680 http://hdl.handle.net/11449/112279 10.4238/2014.March.31.7 WOS:000334114800152 WOS000334114800152.pdf 7087372884726559 |
url |
http://dx.doi.org/10.4238/2014.March.31.7 http://hdl.handle.net/11449/112279 |
identifier_str_mv |
Genetics And Molecular Research. Ribeirao Preto: Funpec-editora, v. 13, n. 1, p. 2268-2277, 2014. 1676-5680 10.4238/2014.March.31.7 WOS:000334114800152 WOS000334114800152.pdf 7087372884726559 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Genetics and Molecular Research 0,439 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
2268-2277 application/pdf |
dc.publisher.none.fl_str_mv |
Funpec-editora |
publisher.none.fl_str_mv |
Funpec-editora |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129325622362112 |