Genetic Variations of Fourth Exon Region of Prolactin Gene and Its Associations with Growth Traits in European Sea Bass Dicentrarchus labrax (Moronidae)

Detalhes bibliográficos
Autor(a) principal: Özcan-Gökçek, E.
Data de Publicação: 2023
Outros Autores: Işık, R. [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1134/S0032945223030128
http://hdl.handle.net/11449/247082
Resumo: Abstract: European sea bass Dicentrarchus labrax (Moronidae), which has a high commercial value, is mainly produced in the Mediterranean region. Prolactin (PRL) is a member of the helix bundle protein family that is secreted in the anterior pituitary gland and has a significant role in osmoregulation and growth in teleost fish. In this study, we investigated the genetic variation of the partial sequence of 3rd, 4th introns, and 4th exon regions of the PRL gene in Dicentrarchus labrax and its association with growth traits that were reared in cage conditions. Two SNPs (g.484 A > C, g.529 T > C) and one 15 bp indel (insertion/deletion) have been found in the 3rd intron region of the PRL gene of Dicentrarchus labrax. A significant association has been identified between the total body weight and the genotypes for PRL g.529 T > C locus (р < 0.05). The heterozygote genotype of the PRL g.529 T > C locus has a significantly higher total body weight than the other genotypes in the population (p < 0.05). Association analysis indicated that this SNP in the PRL gene is correlated with growth traits and could be used for genomic selection programs in Dicentrarchus labrax breeding.
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spelling Genetic Variations of Fourth Exon Region of Prolactin Gene and Its Associations with Growth Traits in European Sea Bass Dicentrarchus labrax (Moronidae)European sea bassgrowthprolactinSNPAbstract: European sea bass Dicentrarchus labrax (Moronidae), which has a high commercial value, is mainly produced in the Mediterranean region. Prolactin (PRL) is a member of the helix bundle protein family that is secreted in the anterior pituitary gland and has a significant role in osmoregulation and growth in teleost fish. In this study, we investigated the genetic variation of the partial sequence of 3rd, 4th introns, and 4th exon regions of the PRL gene in Dicentrarchus labrax and its association with growth traits that were reared in cage conditions. Two SNPs (g.484 A > C, g.529 T > C) and one 15 bp indel (insertion/deletion) have been found in the 3rd intron region of the PRL gene of Dicentrarchus labrax. A significant association has been identified between the total body weight and the genotypes for PRL g.529 T > C locus (р < 0.05). The heterozygote genotype of the PRL g.529 T > C locus has a significantly higher total body weight than the other genotypes in the population (p < 0.05). Association analysis indicated that this SNP in the PRL gene is correlated with growth traits and could be used for genomic selection programs in Dicentrarchus labrax breeding.Ege University Faculty of Fisheries Department of AquacultureTekirdağ Namık Kemal University Faculty of Agriculture Department of Agricultural BiotechnologySão Paulo State University Faculdade de Medicina Veterinária—Câmpus de AraçatubaSão Paulo State University Faculdade de Medicina Veterinária—Câmpus de AraçatubaFaculty of FisheriesFaculty of AgricultureUniversidade Estadual Paulista (UNESP)Özcan-Gökçek, E.Işık, R. [UNESP]2023-07-29T13:05:46Z2023-07-29T13:05:46Z2023-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1134/S0032945223030128Journal of Ichthyology.1555-64250032-9452http://hdl.handle.net/11449/24708210.1134/S00329452230301282-s2.0-85151301144Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Ichthyologyinfo:eu-repo/semantics/openAccess2023-07-29T13:05:46Zoai:repositorio.unesp.br:11449/247082Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T21:42:19.981476Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Genetic Variations of Fourth Exon Region of Prolactin Gene and Its Associations with Growth Traits in European Sea Bass Dicentrarchus labrax (Moronidae)
title Genetic Variations of Fourth Exon Region of Prolactin Gene and Its Associations with Growth Traits in European Sea Bass Dicentrarchus labrax (Moronidae)
spellingShingle Genetic Variations of Fourth Exon Region of Prolactin Gene and Its Associations with Growth Traits in European Sea Bass Dicentrarchus labrax (Moronidae)
Özcan-Gökçek, E.
European sea bass
growth
prolactin
SNP
title_short Genetic Variations of Fourth Exon Region of Prolactin Gene and Its Associations with Growth Traits in European Sea Bass Dicentrarchus labrax (Moronidae)
title_full Genetic Variations of Fourth Exon Region of Prolactin Gene and Its Associations with Growth Traits in European Sea Bass Dicentrarchus labrax (Moronidae)
title_fullStr Genetic Variations of Fourth Exon Region of Prolactin Gene and Its Associations with Growth Traits in European Sea Bass Dicentrarchus labrax (Moronidae)
title_full_unstemmed Genetic Variations of Fourth Exon Region of Prolactin Gene and Its Associations with Growth Traits in European Sea Bass Dicentrarchus labrax (Moronidae)
title_sort Genetic Variations of Fourth Exon Region of Prolactin Gene and Its Associations with Growth Traits in European Sea Bass Dicentrarchus labrax (Moronidae)
author Özcan-Gökçek, E.
author_facet Özcan-Gökçek, E.
Işık, R. [UNESP]
author_role author
author2 Işık, R. [UNESP]
author2_role author
dc.contributor.none.fl_str_mv Faculty of Fisheries
Faculty of Agriculture
Universidade Estadual Paulista (UNESP)
dc.contributor.author.fl_str_mv Özcan-Gökçek, E.
Işık, R. [UNESP]
dc.subject.por.fl_str_mv European sea bass
growth
prolactin
SNP
topic European sea bass
growth
prolactin
SNP
description Abstract: European sea bass Dicentrarchus labrax (Moronidae), which has a high commercial value, is mainly produced in the Mediterranean region. Prolactin (PRL) is a member of the helix bundle protein family that is secreted in the anterior pituitary gland and has a significant role in osmoregulation and growth in teleost fish. In this study, we investigated the genetic variation of the partial sequence of 3rd, 4th introns, and 4th exon regions of the PRL gene in Dicentrarchus labrax and its association with growth traits that were reared in cage conditions. Two SNPs (g.484 A > C, g.529 T > C) and one 15 bp indel (insertion/deletion) have been found in the 3rd intron region of the PRL gene of Dicentrarchus labrax. A significant association has been identified between the total body weight and the genotypes for PRL g.529 T > C locus (р < 0.05). The heterozygote genotype of the PRL g.529 T > C locus has a significantly higher total body weight than the other genotypes in the population (p < 0.05). Association analysis indicated that this SNP in the PRL gene is correlated with growth traits and could be used for genomic selection programs in Dicentrarchus labrax breeding.
publishDate 2023
dc.date.none.fl_str_mv 2023-07-29T13:05:46Z
2023-07-29T13:05:46Z
2023-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1134/S0032945223030128
Journal of Ichthyology.
1555-6425
0032-9452
http://hdl.handle.net/11449/247082
10.1134/S0032945223030128
2-s2.0-85151301144
url http://dx.doi.org/10.1134/S0032945223030128
http://hdl.handle.net/11449/247082
identifier_str_mv Journal of Ichthyology.
1555-6425
0032-9452
10.1134/S0032945223030128
2-s2.0-85151301144
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of Ichthyology
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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