Occurrence of dead core in catalytic particles containing immobilized enzymes: analysis for the Michaelis–Menten kinetics and assessment of numerical methods
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1007/s00449-016-1647-0 http://hdl.handle.net/11449/173147 |
Resumo: | In this article, the occurrence of dead core in catalytic particles containing immobilized enzymes is analyzed for the Michaelis–Menten kinetics. An assessment of numerical methods is performed to solve the boundary value problem generated by the mathematical modeling of diffusion and reaction processes under steady state and isothermal conditions. Two classes of numerical methods were employed: shooting and collocation. The shooting method used the ode function from Scilab software. The collocation methods included: that implemented by the bvode function of Scilab, the orthogonal collocation, and the orthogonal collocation on finite elements. The methods were validated for simplified forms of the Michaelis–Menten equation (zero-order and first-order kinetics), for which analytical solutions are available. Among the methods covered in this article, the orthogonal collocation on finite elements proved to be the most robust and efficient method to solve the boundary value problem concerning Michaelis–Menten kinetics. For this enzyme kinetics, it was found that the dead core can occur when verified certain conditions of diffusion–reaction within the catalytic particle. The application of the concepts and methods presented in this study will allow for a more generalized analysis and more accurate designs of heterogeneous enzymatic reactors. |
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Occurrence of dead core in catalytic particles containing immobilized enzymes: analysis for the Michaelis–Menten kinetics and assessment of numerical methodsDead coreDiffusion and reactionEffectiveness factorImmobilized enzymesMichaelis–Menten kineticsIn this article, the occurrence of dead core in catalytic particles containing immobilized enzymes is analyzed for the Michaelis–Menten kinetics. An assessment of numerical methods is performed to solve the boundary value problem generated by the mathematical modeling of diffusion and reaction processes under steady state and isothermal conditions. Two classes of numerical methods were employed: shooting and collocation. The shooting method used the ode function from Scilab software. The collocation methods included: that implemented by the bvode function of Scilab, the orthogonal collocation, and the orthogonal collocation on finite elements. The methods were validated for simplified forms of the Michaelis–Menten equation (zero-order and first-order kinetics), for which analytical solutions are available. Among the methods covered in this article, the orthogonal collocation on finite elements proved to be the most robust and efficient method to solve the boundary value problem concerning Michaelis–Menten kinetics. For this enzyme kinetics, it was found that the dead core can occur when verified certain conditions of diffusion–reaction within the catalytic particle. The application of the concepts and methods presented in this study will allow for a more generalized analysis and more accurate designs of heterogeneous enzymatic reactors.Departamento de Engenharia Química Escola de Engenharia de Lorena USP–Universidade de São Paulo, Estrada Municipal do CampinhoDepartamento de Bioprocessos e Biotecnologia Faculdade de Ciências Farmacêuticas UNESP–Univ Estadual Paulista, Rodovia Araraquara-Jaú Km 1Departamento de Bioprocessos e Biotecnologia Faculdade de Ciências Farmacêuticas UNESP–Univ Estadual Paulista, Rodovia Araraquara-Jaú Km 1Universidade de São Paulo (USP)Universidade Estadual Paulista (Unesp)Pereira, Félix MonteiroOliveira, Samuel Conceição [UNESP]2018-12-11T17:03:51Z2018-12-11T17:03:51Z2016-11-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1717-1727application/pdfhttp://dx.doi.org/10.1007/s00449-016-1647-0Bioprocess and Biosystems Engineering, v. 39, n. 11, p. 1717-1727, 2016.1615-76051615-7591http://hdl.handle.net/11449/17314710.1007/s00449-016-1647-02-s2.0-849765147862-s2.0-84976514786.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBioprocess and Biosystems Engineering0,6400,640info:eu-repo/semantics/openAccess2023-11-30T06:16:58Zoai:repositorio.unesp.br:11449/173147Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:09:28.580832Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Occurrence of dead core in catalytic particles containing immobilized enzymes: analysis for the Michaelis–Menten kinetics and assessment of numerical methods |
title |
Occurrence of dead core in catalytic particles containing immobilized enzymes: analysis for the Michaelis–Menten kinetics and assessment of numerical methods |
spellingShingle |
Occurrence of dead core in catalytic particles containing immobilized enzymes: analysis for the Michaelis–Menten kinetics and assessment of numerical methods Pereira, Félix Monteiro Dead core Diffusion and reaction Effectiveness factor Immobilized enzymes Michaelis–Menten kinetics |
title_short |
Occurrence of dead core in catalytic particles containing immobilized enzymes: analysis for the Michaelis–Menten kinetics and assessment of numerical methods |
title_full |
Occurrence of dead core in catalytic particles containing immobilized enzymes: analysis for the Michaelis–Menten kinetics and assessment of numerical methods |
title_fullStr |
Occurrence of dead core in catalytic particles containing immobilized enzymes: analysis for the Michaelis–Menten kinetics and assessment of numerical methods |
title_full_unstemmed |
Occurrence of dead core in catalytic particles containing immobilized enzymes: analysis for the Michaelis–Menten kinetics and assessment of numerical methods |
title_sort |
Occurrence of dead core in catalytic particles containing immobilized enzymes: analysis for the Michaelis–Menten kinetics and assessment of numerical methods |
author |
Pereira, Félix Monteiro |
author_facet |
Pereira, Félix Monteiro Oliveira, Samuel Conceição [UNESP] |
author_role |
author |
author2 |
Oliveira, Samuel Conceição [UNESP] |
author2_role |
author |
dc.contributor.none.fl_str_mv |
Universidade de São Paulo (USP) Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Pereira, Félix Monteiro Oliveira, Samuel Conceição [UNESP] |
dc.subject.por.fl_str_mv |
Dead core Diffusion and reaction Effectiveness factor Immobilized enzymes Michaelis–Menten kinetics |
topic |
Dead core Diffusion and reaction Effectiveness factor Immobilized enzymes Michaelis–Menten kinetics |
description |
In this article, the occurrence of dead core in catalytic particles containing immobilized enzymes is analyzed for the Michaelis–Menten kinetics. An assessment of numerical methods is performed to solve the boundary value problem generated by the mathematical modeling of diffusion and reaction processes under steady state and isothermal conditions. Two classes of numerical methods were employed: shooting and collocation. The shooting method used the ode function from Scilab software. The collocation methods included: that implemented by the bvode function of Scilab, the orthogonal collocation, and the orthogonal collocation on finite elements. The methods were validated for simplified forms of the Michaelis–Menten equation (zero-order and first-order kinetics), for which analytical solutions are available. Among the methods covered in this article, the orthogonal collocation on finite elements proved to be the most robust and efficient method to solve the boundary value problem concerning Michaelis–Menten kinetics. For this enzyme kinetics, it was found that the dead core can occur when verified certain conditions of diffusion–reaction within the catalytic particle. The application of the concepts and methods presented in this study will allow for a more generalized analysis and more accurate designs of heterogeneous enzymatic reactors. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-11-01 2018-12-11T17:03:51Z 2018-12-11T17:03:51Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1007/s00449-016-1647-0 Bioprocess and Biosystems Engineering, v. 39, n. 11, p. 1717-1727, 2016. 1615-7605 1615-7591 http://hdl.handle.net/11449/173147 10.1007/s00449-016-1647-0 2-s2.0-84976514786 2-s2.0-84976514786.pdf |
url |
http://dx.doi.org/10.1007/s00449-016-1647-0 http://hdl.handle.net/11449/173147 |
identifier_str_mv |
Bioprocess and Biosystems Engineering, v. 39, n. 11, p. 1717-1727, 2016. 1615-7605 1615-7591 10.1007/s00449-016-1647-0 2-s2.0-84976514786 2-s2.0-84976514786.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Bioprocess and Biosystems Engineering 0,640 0,640 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
1717-1727 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129026965897216 |