Computational method for unsupervised segmentation of lymphoma histological images based on fuzzy 3-partition entropy and genetic algorithm
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.eswa.2017.03.051 http://hdl.handle.net/11449/162808 |
Resumo: | Non-Hodgkin lymphoma is the most common cancer of the lymphatic system and should be considered as a group of several closely related cancers, which can show differences in their growth patterns, their impact on the body and how they are treated. The diagnosis of the different types of neoplasia is made by a specialist through the analysis of histological images. However, these analyses are complex and the same case can lead to different understandings among pathologists, due to the exhaustive analysis of decisions, the time required and the presence of complex histological features. In this context, computational algorithms can be applied as tools to aid specialists through the application of segmentation methods to identify regions of interest that are essential for lymphomas diagnosis. In this paper, an unsupervised method for segmentation of nuclear components of neoplastic cells is proposed to analyze histological images of lymphoma stained with hematoxylin-eosin. The proposed method is based on the association among histogram equalization, Gaussian filter, fuzzy 3-partition entropy, genetic algorithm, morphological techniques and the valley-emphasis method in order to analyze neoplastic nuclear components, improve the contrast and illumination conditions, remove noise, split overlapping cells and refine contours. The results were evaluated through comparisons with those provided by a specialist and techniques available in the literature considering the metrics of accuracy, sensitivity, specificity and variation of information. The mean value of accuracy for the proposed method was 81.48%. Although the method obtained sensitivity rates between 41% and 51%, the accuracy values showed relevance when compared to those provided by other studies. Therefore, the novelties presented here may already encourage new studies with a more comprehensive overview of lymphoma segmentation. (C) 2017 Elsevier Ltd. All rights reserved. |
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Computational method for unsupervised segmentation of lymphoma histological images based on fuzzy 3-partition entropy and genetic algorithmNuclear segmentationHistological imagesLymphomaFuzzy 3-partitionGenetic algorithmValley-emphasisNon-Hodgkin lymphoma is the most common cancer of the lymphatic system and should be considered as a group of several closely related cancers, which can show differences in their growth patterns, their impact on the body and how they are treated. The diagnosis of the different types of neoplasia is made by a specialist through the analysis of histological images. However, these analyses are complex and the same case can lead to different understandings among pathologists, due to the exhaustive analysis of decisions, the time required and the presence of complex histological features. In this context, computational algorithms can be applied as tools to aid specialists through the application of segmentation methods to identify regions of interest that are essential for lymphomas diagnosis. In this paper, an unsupervised method for segmentation of nuclear components of neoplastic cells is proposed to analyze histological images of lymphoma stained with hematoxylin-eosin. The proposed method is based on the association among histogram equalization, Gaussian filter, fuzzy 3-partition entropy, genetic algorithm, morphological techniques and the valley-emphasis method in order to analyze neoplastic nuclear components, improve the contrast and illumination conditions, remove noise, split overlapping cells and refine contours. The results were evaluated through comparisons with those provided by a specialist and techniques available in the literature considering the metrics of accuracy, sensitivity, specificity and variation of information. The mean value of accuracy for the proposed method was 81.48%. Although the method obtained sensitivity rates between 41% and 51%, the accuracy values showed relevance when compared to those provided by other studies. Therefore, the novelties presented here may already encourage new studies with a more comprehensive overview of lymphoma segmentation. (C) 2017 Elsevier Ltd. All rights reserved.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de Minas Gerais (FAPEMIG)Fed Univ ABC, Ctr Math Comp & Cognit, Ave Estados 5001, BR-09210580 Sao Paulo, BrazilUniv Fed Uberlandia, Inst Biomed Sci, Dept Histol & Morphol, Ave Amazonas S-N, BR-38405320 Uberlandia, MG, BrazilSao Paulo State Univ, Dept Comp Sci & Stat, R Cristovao Colombo 2265, BR-15054000 Sao Paulo, BrazilSao Paulo State Univ, Dept Comp Sci & Stat, R Cristovao Colombo 2265, BR-15054000 Sao Paulo, BrazilCAPES: 1575210FAPEMIG: TEC - APQ-02885-15Elsevier B.V.Fed Univ ABCUniversidade Federal de Uberlândia (UFU)Universidade Estadual Paulista (Unesp)Azevedo Tosta, Thaina A.Faria, Paulo RogerioNeves, Leandro Alves [UNESP]Nascimento, Marcelo Zanchetta do2018-11-26T17:31:28Z2018-11-26T17:31:28Z2017-09-15info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article223-243application/pdfhttp://dx.doi.org/10.1016/j.eswa.2017.03.051Expert Systems With Applications. Oxford: Pergamon-elsevier Science Ltd, v. 81, p. 223-243, 2017.0957-4174http://hdl.handle.net/11449/16280810.1016/j.eswa.2017.03.051WOS:000401593300016WOS000401593300016.pdf2139053814879312Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengExpert Systems With Applications1,271info:eu-repo/semantics/openAccess2024-10-25T14:47:30Zoai:repositorio.unesp.br:11449/162808Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-10-25T14:47:30Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Computational method for unsupervised segmentation of lymphoma histological images based on fuzzy 3-partition entropy and genetic algorithm |
title |
Computational method for unsupervised segmentation of lymphoma histological images based on fuzzy 3-partition entropy and genetic algorithm |
spellingShingle |
Computational method for unsupervised segmentation of lymphoma histological images based on fuzzy 3-partition entropy and genetic algorithm Azevedo Tosta, Thaina A. Nuclear segmentation Histological images Lymphoma Fuzzy 3-partition Genetic algorithm Valley-emphasis |
title_short |
Computational method for unsupervised segmentation of lymphoma histological images based on fuzzy 3-partition entropy and genetic algorithm |
title_full |
Computational method for unsupervised segmentation of lymphoma histological images based on fuzzy 3-partition entropy and genetic algorithm |
title_fullStr |
Computational method for unsupervised segmentation of lymphoma histological images based on fuzzy 3-partition entropy and genetic algorithm |
title_full_unstemmed |
Computational method for unsupervised segmentation of lymphoma histological images based on fuzzy 3-partition entropy and genetic algorithm |
title_sort |
Computational method for unsupervised segmentation of lymphoma histological images based on fuzzy 3-partition entropy and genetic algorithm |
author |
Azevedo Tosta, Thaina A. |
author_facet |
Azevedo Tosta, Thaina A. Faria, Paulo Rogerio Neves, Leandro Alves [UNESP] Nascimento, Marcelo Zanchetta do |
author_role |
author |
author2 |
Faria, Paulo Rogerio Neves, Leandro Alves [UNESP] Nascimento, Marcelo Zanchetta do |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
Fed Univ ABC Universidade Federal de Uberlândia (UFU) Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Azevedo Tosta, Thaina A. Faria, Paulo Rogerio Neves, Leandro Alves [UNESP] Nascimento, Marcelo Zanchetta do |
dc.subject.por.fl_str_mv |
Nuclear segmentation Histological images Lymphoma Fuzzy 3-partition Genetic algorithm Valley-emphasis |
topic |
Nuclear segmentation Histological images Lymphoma Fuzzy 3-partition Genetic algorithm Valley-emphasis |
description |
Non-Hodgkin lymphoma is the most common cancer of the lymphatic system and should be considered as a group of several closely related cancers, which can show differences in their growth patterns, their impact on the body and how they are treated. The diagnosis of the different types of neoplasia is made by a specialist through the analysis of histological images. However, these analyses are complex and the same case can lead to different understandings among pathologists, due to the exhaustive analysis of decisions, the time required and the presence of complex histological features. In this context, computational algorithms can be applied as tools to aid specialists through the application of segmentation methods to identify regions of interest that are essential for lymphomas diagnosis. In this paper, an unsupervised method for segmentation of nuclear components of neoplastic cells is proposed to analyze histological images of lymphoma stained with hematoxylin-eosin. The proposed method is based on the association among histogram equalization, Gaussian filter, fuzzy 3-partition entropy, genetic algorithm, morphological techniques and the valley-emphasis method in order to analyze neoplastic nuclear components, improve the contrast and illumination conditions, remove noise, split overlapping cells and refine contours. The results were evaluated through comparisons with those provided by a specialist and techniques available in the literature considering the metrics of accuracy, sensitivity, specificity and variation of information. The mean value of accuracy for the proposed method was 81.48%. Although the method obtained sensitivity rates between 41% and 51%, the accuracy values showed relevance when compared to those provided by other studies. Therefore, the novelties presented here may already encourage new studies with a more comprehensive overview of lymphoma segmentation. (C) 2017 Elsevier Ltd. All rights reserved. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-09-15 2018-11-26T17:31:28Z 2018-11-26T17:31:28Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.eswa.2017.03.051 Expert Systems With Applications. Oxford: Pergamon-elsevier Science Ltd, v. 81, p. 223-243, 2017. 0957-4174 http://hdl.handle.net/11449/162808 10.1016/j.eswa.2017.03.051 WOS:000401593300016 WOS000401593300016.pdf 2139053814879312 |
url |
http://dx.doi.org/10.1016/j.eswa.2017.03.051 http://hdl.handle.net/11449/162808 |
identifier_str_mv |
Expert Systems With Applications. Oxford: Pergamon-elsevier Science Ltd, v. 81, p. 223-243, 2017. 0957-4174 10.1016/j.eswa.2017.03.051 WOS:000401593300016 WOS000401593300016.pdf 2139053814879312 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Expert Systems With Applications 1,271 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
223-243 application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier B.V. |
publisher.none.fl_str_mv |
Elsevier B.V. |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
repositoriounesp@unesp.br |
_version_ |
1826303509108097024 |