Identities among actin-encoding cDNAs of the Nile tilapia (Oreochromis niloticus) and other eukaryote species revealed by nucleotide and amino acid sequence analyses
Autor(a) principal: | |
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Data de Publicação: | 2008 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1590/s1415-47572008000200031 http://hdl.handle.net/11449/225210 |
Resumo: | Actin-encoding cDNAs of Nile tilapia (Oreochromis niloticus) were isolated by RT-PCR using total RNA samples of different tissues and further characterized by nucleotide sequencing and in silico amino acid (aa) sequence analysis. Comparisons among the actin gene sequences of O. niloticus and those of other species evidenced that the isolated genes present a high similarity to other fish and other vertebrate actin genes. The highest nucleotide resemblance was observed between O. niloticus and O. mossambicus α-actin and β-actin genes. Analysis of the predicted aa sequences revealed two distinct types of cytoplasmic actins, one cardiac muscle actin type and one skeletal muscle actin type that were expressed in different tissues of Nile tilapia. The evolutionary relationships between the Nile tilapia actin genes and diverse other organisms is discussed. Copyright © 2008, Sociedade Brasileira de Genética. |
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Identities among actin-encoding cDNAs of the Nile tilapia (Oreochromis niloticus) and other eukaryote species revealed by nucleotide and amino acid sequence analysesActinExpression patternNile tilapiaOreochromis niloticusActin-encoding cDNAs of Nile tilapia (Oreochromis niloticus) were isolated by RT-PCR using total RNA samples of different tissues and further characterized by nucleotide sequencing and in silico amino acid (aa) sequence analysis. Comparisons among the actin gene sequences of O. niloticus and those of other species evidenced that the isolated genes present a high similarity to other fish and other vertebrate actin genes. The highest nucleotide resemblance was observed between O. niloticus and O. mossambicus α-actin and β-actin genes. Analysis of the predicted aa sequences revealed two distinct types of cytoplasmic actins, one cardiac muscle actin type and one skeletal muscle actin type that were expressed in different tissues of Nile tilapia. The evolutionary relationships between the Nile tilapia actin genes and diverse other organisms is discussed. Copyright © 2008, Sociedade Brasileira de Genética.Departamento de Morfologia Instituto de Biociências Universidade Estadual Paulista, Campus de Botucatu, 18618-000 Botucatu, SPDepartamento de Genética Instituto de Biociências Universidade Estadual Paulista, Campus de Botucatu, Botucatu, SPDepartamento de Morfologia Instituto de Biociências Universidade Estadual Paulista, Campus de Botucatu, 18618-000 Botucatu, SPDepartamento de Genética Instituto de Biociências Universidade Estadual Paulista, Campus de Botucatu, Botucatu, SPUniversidade Estadual Paulista (UNESP)Poletto, Andréia B. [UNESP]Wasko, Adriane Pinto [UNESP]Oliveira, Claudio [UNESP]Azevedo, Alexandre [UNESP]Carvalho, Robson F. [UNESP]Silva, Maeli Dal Pai [UNESP]Foresti, Fausto [UNESP]Martins, Cesar [UNESP]2022-04-28T20:42:15Z2022-04-28T20:42:15Z2008-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article352-356http://dx.doi.org/10.1590/s1415-47572008000200031Genetics and Molecular Biology, v. 31, n. 1 SUPPL. 1, p. 352-356, 2008.1678-46851415-4757http://hdl.handle.net/11449/22521010.1590/s1415-475720080002000312-s2.0-46649096442Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics and Molecular Biologyinfo:eu-repo/semantics/openAccess2022-04-28T20:42:15Zoai:repositorio.unesp.br:11449/225210Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:53:50.563662Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Identities among actin-encoding cDNAs of the Nile tilapia (Oreochromis niloticus) and other eukaryote species revealed by nucleotide and amino acid sequence analyses |
title |
Identities among actin-encoding cDNAs of the Nile tilapia (Oreochromis niloticus) and other eukaryote species revealed by nucleotide and amino acid sequence analyses |
spellingShingle |
Identities among actin-encoding cDNAs of the Nile tilapia (Oreochromis niloticus) and other eukaryote species revealed by nucleotide and amino acid sequence analyses Poletto, Andréia B. [UNESP] Actin Expression pattern Nile tilapia Oreochromis niloticus |
title_short |
Identities among actin-encoding cDNAs of the Nile tilapia (Oreochromis niloticus) and other eukaryote species revealed by nucleotide and amino acid sequence analyses |
title_full |
Identities among actin-encoding cDNAs of the Nile tilapia (Oreochromis niloticus) and other eukaryote species revealed by nucleotide and amino acid sequence analyses |
title_fullStr |
Identities among actin-encoding cDNAs of the Nile tilapia (Oreochromis niloticus) and other eukaryote species revealed by nucleotide and amino acid sequence analyses |
title_full_unstemmed |
Identities among actin-encoding cDNAs of the Nile tilapia (Oreochromis niloticus) and other eukaryote species revealed by nucleotide and amino acid sequence analyses |
title_sort |
Identities among actin-encoding cDNAs of the Nile tilapia (Oreochromis niloticus) and other eukaryote species revealed by nucleotide and amino acid sequence analyses |
author |
Poletto, Andréia B. [UNESP] |
author_facet |
Poletto, Andréia B. [UNESP] Wasko, Adriane Pinto [UNESP] Oliveira, Claudio [UNESP] Azevedo, Alexandre [UNESP] Carvalho, Robson F. [UNESP] Silva, Maeli Dal Pai [UNESP] Foresti, Fausto [UNESP] Martins, Cesar [UNESP] |
author_role |
author |
author2 |
Wasko, Adriane Pinto [UNESP] Oliveira, Claudio [UNESP] Azevedo, Alexandre [UNESP] Carvalho, Robson F. [UNESP] Silva, Maeli Dal Pai [UNESP] Foresti, Fausto [UNESP] Martins, Cesar [UNESP] |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (UNESP) |
dc.contributor.author.fl_str_mv |
Poletto, Andréia B. [UNESP] Wasko, Adriane Pinto [UNESP] Oliveira, Claudio [UNESP] Azevedo, Alexandre [UNESP] Carvalho, Robson F. [UNESP] Silva, Maeli Dal Pai [UNESP] Foresti, Fausto [UNESP] Martins, Cesar [UNESP] |
dc.subject.por.fl_str_mv |
Actin Expression pattern Nile tilapia Oreochromis niloticus |
topic |
Actin Expression pattern Nile tilapia Oreochromis niloticus |
description |
Actin-encoding cDNAs of Nile tilapia (Oreochromis niloticus) were isolated by RT-PCR using total RNA samples of different tissues and further characterized by nucleotide sequencing and in silico amino acid (aa) sequence analysis. Comparisons among the actin gene sequences of O. niloticus and those of other species evidenced that the isolated genes present a high similarity to other fish and other vertebrate actin genes. The highest nucleotide resemblance was observed between O. niloticus and O. mossambicus α-actin and β-actin genes. Analysis of the predicted aa sequences revealed two distinct types of cytoplasmic actins, one cardiac muscle actin type and one skeletal muscle actin type that were expressed in different tissues of Nile tilapia. The evolutionary relationships between the Nile tilapia actin genes and diverse other organisms is discussed. Copyright © 2008, Sociedade Brasileira de Genética. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-01-01 2022-04-28T20:42:15Z 2022-04-28T20:42:15Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/s1415-47572008000200031 Genetics and Molecular Biology, v. 31, n. 1 SUPPL. 1, p. 352-356, 2008. 1678-4685 1415-4757 http://hdl.handle.net/11449/225210 10.1590/s1415-47572008000200031 2-s2.0-46649096442 |
url |
http://dx.doi.org/10.1590/s1415-47572008000200031 http://hdl.handle.net/11449/225210 |
identifier_str_mv |
Genetics and Molecular Biology, v. 31, n. 1 SUPPL. 1, p. 352-356, 2008. 1678-4685 1415-4757 10.1590/s1415-47572008000200031 2-s2.0-46649096442 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Genetics and Molecular Biology |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
352-356 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128580386816000 |