Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome

Detalhes bibliográficos
Autor(a) principal: Utsunomia, Ricardo [UNESP]
Data de Publicação: 2019
Outros Autores: Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP], Ruiz-Ruano, Francisco J., Goes, Caio Augusto Gomes [UNESP], Melo, Silvana [UNESP], Ramos, Lucas Peres [UNESP], Oliveira, Claudio [UNESP], Porto-Foresti, Fábio [UNESP], Foresti, Fausto [UNESP], Hashimoto, Diogo Teruo [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1038/s41598-019-42383-8
http://hdl.handle.net/11449/188972
Resumo: The accumulation of repetitive DNA sequences on the sex-limited W or Y chromosomes is a well-known process that is likely triggered by the suppression of recombination between the sex chromosomes, which leads to major differences in their sizes and genetic content. Here, we report an analysis conducted on the satellitome of Megaleporinus macrocephalus that focuses specifically on the satDNAs that have been shown to have higher abundances in females and are putatively located on the W chromosome in this species. We characterized 164 satellite families in M. macrocephalus, which is, by far, the most satellite-rich species discovered to date. Subsequently, we mapped 30 satellites, 22 of which were located on the W chromosome, and 14 were shown to exist only on the W chromosome. Finally, we report two simple, quick and reliable methods that can be used for sex identification in M. macrocephalus individuals using fin clips or scales, which could be applicable to future studies conducted in the field of aquaculture.
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spelling Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosomeThe accumulation of repetitive DNA sequences on the sex-limited W or Y chromosomes is a well-known process that is likely triggered by the suppression of recombination between the sex chromosomes, which leads to major differences in their sizes and genetic content. Here, we report an analysis conducted on the satellitome of Megaleporinus macrocephalus that focuses specifically on the satDNAs that have been shown to have higher abundances in females and are putatively located on the W chromosome in this species. We characterized 164 satellite families in M. macrocephalus, which is, by far, the most satellite-rich species discovered to date. Subsequently, we mapped 30 satellites, 22 of which were located on the W chromosome, and 14 were shown to exist only on the W chromosome. Finally, we report two simple, quick and reliable methods that can be used for sex identification in M. macrocephalus individuals using fin clips or scales, which could be applicable to future studies conducted in the field of aquaculture.Departamento de Morfologia Instituto de Biociências Universidade Estadual Paulista - UNESP, Distrito de Rubião Junior, s/nDepartamento de Genética Universidad de GranadaDepartamento de Ciências Biológicas Faculdade de Ciências Universidade Estadual Paulista - UNESP, Campus de BauruCAUNESP Universidade Estadual Paulista - UNESP Campus JaboticabalDepartamento de Morfologia Instituto de Biociências Universidade Estadual Paulista - UNESP, Distrito de Rubião Junior, s/nDepartamento de Ciências Biológicas Faculdade de Ciências Universidade Estadual Paulista - UNESP, Campus de BauruCAUNESP Universidade Estadual Paulista - UNESP Campus JaboticabalUniversidade Estadual Paulista (Unesp)Universidad de GranadaUtsunomia, Ricardo [UNESP]Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP]Ruiz-Ruano, Francisco J.Goes, Caio Augusto Gomes [UNESP]Melo, Silvana [UNESP]Ramos, Lucas Peres [UNESP]Oliveira, Claudio [UNESP]Porto-Foresti, Fábio [UNESP]Foresti, Fausto [UNESP]Hashimoto, Diogo Teruo [UNESP]2019-10-06T16:25:39Z2019-10-06T16:25:39Z2019-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1038/s41598-019-42383-8Scientific Reports, v. 9, n. 1, 2019.2045-2322http://hdl.handle.net/11449/18897210.1038/s41598-019-42383-82-s2.0-85064251303Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengScientific Reportsinfo:eu-repo/semantics/openAccess2024-04-23T15:23:39Zoai:repositorio.unesp.br:11449/188972Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:37:53.590682Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
title Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
spellingShingle Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
Utsunomia, Ricardo [UNESP]
title_short Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
title_full Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
title_fullStr Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
title_full_unstemmed Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
title_sort Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
author Utsunomia, Ricardo [UNESP]
author_facet Utsunomia, Ricardo [UNESP]
Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP]
Ruiz-Ruano, Francisco J.
Goes, Caio Augusto Gomes [UNESP]
Melo, Silvana [UNESP]
Ramos, Lucas Peres [UNESP]
Oliveira, Claudio [UNESP]
Porto-Foresti, Fábio [UNESP]
Foresti, Fausto [UNESP]
Hashimoto, Diogo Teruo [UNESP]
author_role author
author2 Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP]
Ruiz-Ruano, Francisco J.
Goes, Caio Augusto Gomes [UNESP]
Melo, Silvana [UNESP]
Ramos, Lucas Peres [UNESP]
Oliveira, Claudio [UNESP]
Porto-Foresti, Fábio [UNESP]
Foresti, Fausto [UNESP]
Hashimoto, Diogo Teruo [UNESP]
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidad de Granada
dc.contributor.author.fl_str_mv Utsunomia, Ricardo [UNESP]
Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP]
Ruiz-Ruano, Francisco J.
Goes, Caio Augusto Gomes [UNESP]
Melo, Silvana [UNESP]
Ramos, Lucas Peres [UNESP]
Oliveira, Claudio [UNESP]
Porto-Foresti, Fábio [UNESP]
Foresti, Fausto [UNESP]
Hashimoto, Diogo Teruo [UNESP]
description The accumulation of repetitive DNA sequences on the sex-limited W or Y chromosomes is a well-known process that is likely triggered by the suppression of recombination between the sex chromosomes, which leads to major differences in their sizes and genetic content. Here, we report an analysis conducted on the satellitome of Megaleporinus macrocephalus that focuses specifically on the satDNAs that have been shown to have higher abundances in females and are putatively located on the W chromosome in this species. We characterized 164 satellite families in M. macrocephalus, which is, by far, the most satellite-rich species discovered to date. Subsequently, we mapped 30 satellites, 22 of which were located on the W chromosome, and 14 were shown to exist only on the W chromosome. Finally, we report two simple, quick and reliable methods that can be used for sex identification in M. macrocephalus individuals using fin clips or scales, which could be applicable to future studies conducted in the field of aquaculture.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-06T16:25:39Z
2019-10-06T16:25:39Z
2019-12-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1038/s41598-019-42383-8
Scientific Reports, v. 9, n. 1, 2019.
2045-2322
http://hdl.handle.net/11449/188972
10.1038/s41598-019-42383-8
2-s2.0-85064251303
url http://dx.doi.org/10.1038/s41598-019-42383-8
http://hdl.handle.net/11449/188972
identifier_str_mv Scientific Reports, v. 9, n. 1, 2019.
2045-2322
10.1038/s41598-019-42383-8
2-s2.0-85064251303
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Scientific Reports
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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