Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1038/s41598-019-42383-8 http://hdl.handle.net/11449/188972 |
Resumo: | The accumulation of repetitive DNA sequences on the sex-limited W or Y chromosomes is a well-known process that is likely triggered by the suppression of recombination between the sex chromosomes, which leads to major differences in their sizes and genetic content. Here, we report an analysis conducted on the satellitome of Megaleporinus macrocephalus that focuses specifically on the satDNAs that have been shown to have higher abundances in females and are putatively located on the W chromosome in this species. We characterized 164 satellite families in M. macrocephalus, which is, by far, the most satellite-rich species discovered to date. Subsequently, we mapped 30 satellites, 22 of which were located on the W chromosome, and 14 were shown to exist only on the W chromosome. Finally, we report two simple, quick and reliable methods that can be used for sex identification in M. macrocephalus individuals using fin clips or scales, which could be applicable to future studies conducted in the field of aquaculture. |
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Repositório Institucional da UNESP |
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spelling |
Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosomeThe accumulation of repetitive DNA sequences on the sex-limited W or Y chromosomes is a well-known process that is likely triggered by the suppression of recombination between the sex chromosomes, which leads to major differences in their sizes and genetic content. Here, we report an analysis conducted on the satellitome of Megaleporinus macrocephalus that focuses specifically on the satDNAs that have been shown to have higher abundances in females and are putatively located on the W chromosome in this species. We characterized 164 satellite families in M. macrocephalus, which is, by far, the most satellite-rich species discovered to date. Subsequently, we mapped 30 satellites, 22 of which were located on the W chromosome, and 14 were shown to exist only on the W chromosome. Finally, we report two simple, quick and reliable methods that can be used for sex identification in M. macrocephalus individuals using fin clips or scales, which could be applicable to future studies conducted in the field of aquaculture.Departamento de Morfologia Instituto de Biociências Universidade Estadual Paulista - UNESP, Distrito de Rubião Junior, s/nDepartamento de Genética Universidad de GranadaDepartamento de Ciências Biológicas Faculdade de Ciências Universidade Estadual Paulista - UNESP, Campus de BauruCAUNESP Universidade Estadual Paulista - UNESP Campus JaboticabalDepartamento de Morfologia Instituto de Biociências Universidade Estadual Paulista - UNESP, Distrito de Rubião Junior, s/nDepartamento de Ciências Biológicas Faculdade de Ciências Universidade Estadual Paulista - UNESP, Campus de BauruCAUNESP Universidade Estadual Paulista - UNESP Campus JaboticabalUniversidade Estadual Paulista (Unesp)Universidad de GranadaUtsunomia, Ricardo [UNESP]Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP]Ruiz-Ruano, Francisco J.Goes, Caio Augusto Gomes [UNESP]Melo, Silvana [UNESP]Ramos, Lucas Peres [UNESP]Oliveira, Claudio [UNESP]Porto-Foresti, Fábio [UNESP]Foresti, Fausto [UNESP]Hashimoto, Diogo Teruo [UNESP]2019-10-06T16:25:39Z2019-10-06T16:25:39Z2019-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1038/s41598-019-42383-8Scientific Reports, v. 9, n. 1, 2019.2045-2322http://hdl.handle.net/11449/18897210.1038/s41598-019-42383-82-s2.0-85064251303Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengScientific Reportsinfo:eu-repo/semantics/openAccess2024-04-23T15:23:39Zoai:repositorio.unesp.br:11449/188972Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:37:53.590682Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome |
title |
Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome |
spellingShingle |
Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome Utsunomia, Ricardo [UNESP] |
title_short |
Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome |
title_full |
Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome |
title_fullStr |
Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome |
title_full_unstemmed |
Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome |
title_sort |
Satellitome landscape analysis of Megaleporinus macrocephalus (Teleostei, Anostomidae) reveals intense accumulation of satellite sequences on the heteromorphic sex chromosome |
author |
Utsunomia, Ricardo [UNESP] |
author_facet |
Utsunomia, Ricardo [UNESP] Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP] Ruiz-Ruano, Francisco J. Goes, Caio Augusto Gomes [UNESP] Melo, Silvana [UNESP] Ramos, Lucas Peres [UNESP] Oliveira, Claudio [UNESP] Porto-Foresti, Fábio [UNESP] Foresti, Fausto [UNESP] Hashimoto, Diogo Teruo [UNESP] |
author_role |
author |
author2 |
Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP] Ruiz-Ruano, Francisco J. Goes, Caio Augusto Gomes [UNESP] Melo, Silvana [UNESP] Ramos, Lucas Peres [UNESP] Oliveira, Claudio [UNESP] Porto-Foresti, Fábio [UNESP] Foresti, Fausto [UNESP] Hashimoto, Diogo Teruo [UNESP] |
author2_role |
author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidad de Granada |
dc.contributor.author.fl_str_mv |
Utsunomia, Ricardo [UNESP] Silva, Duílio Mazzoni Zerbinato de Andrade [UNESP] Ruiz-Ruano, Francisco J. Goes, Caio Augusto Gomes [UNESP] Melo, Silvana [UNESP] Ramos, Lucas Peres [UNESP] Oliveira, Claudio [UNESP] Porto-Foresti, Fábio [UNESP] Foresti, Fausto [UNESP] Hashimoto, Diogo Teruo [UNESP] |
description |
The accumulation of repetitive DNA sequences on the sex-limited W or Y chromosomes is a well-known process that is likely triggered by the suppression of recombination between the sex chromosomes, which leads to major differences in their sizes and genetic content. Here, we report an analysis conducted on the satellitome of Megaleporinus macrocephalus that focuses specifically on the satDNAs that have been shown to have higher abundances in females and are putatively located on the W chromosome in this species. We characterized 164 satellite families in M. macrocephalus, which is, by far, the most satellite-rich species discovered to date. Subsequently, we mapped 30 satellites, 22 of which were located on the W chromosome, and 14 were shown to exist only on the W chromosome. Finally, we report two simple, quick and reliable methods that can be used for sex identification in M. macrocephalus individuals using fin clips or scales, which could be applicable to future studies conducted in the field of aquaculture. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-10-06T16:25:39Z 2019-10-06T16:25:39Z 2019-12-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1038/s41598-019-42383-8 Scientific Reports, v. 9, n. 1, 2019. 2045-2322 http://hdl.handle.net/11449/188972 10.1038/s41598-019-42383-8 2-s2.0-85064251303 |
url |
http://dx.doi.org/10.1038/s41598-019-42383-8 http://hdl.handle.net/11449/188972 |
identifier_str_mv |
Scientific Reports, v. 9, n. 1, 2019. 2045-2322 10.1038/s41598-019-42383-8 2-s2.0-85064251303 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Scientific Reports |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129098322542592 |