Molecular survey and genetic diversity of hemoplasmas in rodents from Chile

Detalhes bibliográficos
Autor(a) principal: Alabí, Amir Salvador
Data de Publicação: 2020
Outros Autores: Monti, Gustavo, Otth, Carola, Sepulveda-García, Paulina, Sánchez-Hidalgo, Melissa, de Mello, Victória Valente Califre [UNESP], Machado, Rosangela Zacarias [UNESP], André, Marcos Rogério [UNESP], Bittencourt, Pedro, Müller, Ananda
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3390/microorganisms8101493
http://hdl.handle.net/11449/206589
Resumo: Even though hemotrophic mycoplasma (hemoplasma) infections are well documented in a wide variety of hosts worldwide, there is a gap in the knowledge aobut hemoplasmas in rodents. This study aimed to molecularly survey and investigate the genetic diversity of hemoplasmas in rodents from Chile. Synanthropic and wild rodents (n = 74) were captured in the southern province of Valdivia (Corral, Valdivia, Riñihue, and Reumén localities). Spleen samples were submitted to a conventional PCR for hemotrophic Mycoplasma spp. targeting the 16S rRNA gene (800 bp), followed by sequencing, phylogenetic, and genetic diversity analyses. The overall occurrence of hemotrophic mycoplasmas in rodents from Valdivia was 24.5% (18/74) [95% CI (14.5; 34.1)]. Hemoplasmas were detected in Mus musculus (1/4), Rattus norvegicus (1/16), Abrothrix longipilis (7/13), A. olivaceo (6/8), and Oligoryzomys longicaudatus (3/10). The nucleotide polymorphism analysis of the targeted 16S rRNA region showed low diversity, with two genotypes and a high identity to the variants detected in wild rodents from Brazil. Hemoplasmas are described for the first time in rodents from Chile with a moderate occurrence and low 16S rDNA genetic diversity within the sampled rodent population. The detected hemoplasma genotypes were specific to rodents and were not shared with other mammals.
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spelling Molecular survey and genetic diversity of hemoplasmas in rodents from Chile16S rRNAHemotrophic mycoplasmasRodentiaSouth AmericaEven though hemotrophic mycoplasma (hemoplasma) infections are well documented in a wide variety of hosts worldwide, there is a gap in the knowledge aobut hemoplasmas in rodents. This study aimed to molecularly survey and investigate the genetic diversity of hemoplasmas in rodents from Chile. Synanthropic and wild rodents (n = 74) were captured in the southern province of Valdivia (Corral, Valdivia, Riñihue, and Reumén localities). Spleen samples were submitted to a conventional PCR for hemotrophic Mycoplasma spp. targeting the 16S rRNA gene (800 bp), followed by sequencing, phylogenetic, and genetic diversity analyses. The overall occurrence of hemotrophic mycoplasmas in rodents from Valdivia was 24.5% (18/74) [95% CI (14.5; 34.1)]. Hemoplasmas were detected in Mus musculus (1/4), Rattus norvegicus (1/16), Abrothrix longipilis (7/13), A. olivaceo (6/8), and Oligoryzomys longicaudatus (3/10). The nucleotide polymorphism analysis of the targeted 16S rRNA region showed low diversity, with two genotypes and a high identity to the variants detected in wild rodents from Brazil. Hemoplasmas are described for the first time in rodents from Chile with a moderate occurrence and low 16S rDNA genetic diversity within the sampled rodent population. The detected hemoplasma genotypes were specific to rodents and were not shared with other mammals.Fondo Nacional de Desarrollo Científico y TecnológicoInstituto de Ciencias Clinicas Veterinarias Facultad de Ciencias Veterinarias Universidad Austral de ChileInsituto de Medicina Preventiva Veterinaria Facultad de Ciencias Veterinarias Universidad Austral de ChileInstituto de Microbiologia Clinica Facultad de Medicina Universidad Austral de ChileInstituto de Ciencia Animal Facultad de de Ciencias Veterinarias Universidad Austral de ChileDepartamento de Patologia UNESP Teriogenologia e Saúde Única Faculdade de Ciências Agrárias e Veterinarias Universidade Estadual Paulista (FCAV)One Health Center for Zoonoses and Tropical Veterinary Medicine Department of Biomedical Sciences Ross University School of Veterinary MedicineDepartamento de Patologia UNESP Teriogenologia e Saúde Única Faculdade de Ciências Agrárias e Veterinarias Universidade Estadual Paulista (FCAV)Fondo Nacional de Desarrollo Científico y Tecnológico: 1141070Fondo Nacional de Desarrollo Científico y Tecnológico: 1191462Universidad Austral de ChileUniversidade Estadual Paulista (Unesp)Ross University School of Veterinary MedicineAlabí, Amir SalvadorMonti, GustavoOtth, CarolaSepulveda-García, PaulinaSánchez-Hidalgo, Melissade Mello, Victória Valente Califre [UNESP]Machado, Rosangela Zacarias [UNESP]André, Marcos Rogério [UNESP]Bittencourt, PedroMüller, Ananda2021-06-25T10:34:49Z2021-06-25T10:34:49Z2020-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1-16http://dx.doi.org/10.3390/microorganisms8101493Microorganisms, v. 8, n. 10, p. 1-16, 2020.2076-2607http://hdl.handle.net/11449/20658910.3390/microorganisms81014932-s2.0-85091760154Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMicroorganismsinfo:eu-repo/semantics/openAccess2024-06-07T13:03:08Zoai:repositorio.unesp.br:11449/206589Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:52:28.051624Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Molecular survey and genetic diversity of hemoplasmas in rodents from Chile
title Molecular survey and genetic diversity of hemoplasmas in rodents from Chile
spellingShingle Molecular survey and genetic diversity of hemoplasmas in rodents from Chile
Alabí, Amir Salvador
16S rRNA
Hemotrophic mycoplasmas
Rodentia
South America
title_short Molecular survey and genetic diversity of hemoplasmas in rodents from Chile
title_full Molecular survey and genetic diversity of hemoplasmas in rodents from Chile
title_fullStr Molecular survey and genetic diversity of hemoplasmas in rodents from Chile
title_full_unstemmed Molecular survey and genetic diversity of hemoplasmas in rodents from Chile
title_sort Molecular survey and genetic diversity of hemoplasmas in rodents from Chile
author Alabí, Amir Salvador
author_facet Alabí, Amir Salvador
Monti, Gustavo
Otth, Carola
Sepulveda-García, Paulina
Sánchez-Hidalgo, Melissa
de Mello, Victória Valente Califre [UNESP]
Machado, Rosangela Zacarias [UNESP]
André, Marcos Rogério [UNESP]
Bittencourt, Pedro
Müller, Ananda
author_role author
author2 Monti, Gustavo
Otth, Carola
Sepulveda-García, Paulina
Sánchez-Hidalgo, Melissa
de Mello, Victória Valente Califre [UNESP]
Machado, Rosangela Zacarias [UNESP]
André, Marcos Rogério [UNESP]
Bittencourt, Pedro
Müller, Ananda
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidad Austral de Chile
Universidade Estadual Paulista (Unesp)
Ross University School of Veterinary Medicine
dc.contributor.author.fl_str_mv Alabí, Amir Salvador
Monti, Gustavo
Otth, Carola
Sepulveda-García, Paulina
Sánchez-Hidalgo, Melissa
de Mello, Victória Valente Califre [UNESP]
Machado, Rosangela Zacarias [UNESP]
André, Marcos Rogério [UNESP]
Bittencourt, Pedro
Müller, Ananda
dc.subject.por.fl_str_mv 16S rRNA
Hemotrophic mycoplasmas
Rodentia
South America
topic 16S rRNA
Hemotrophic mycoplasmas
Rodentia
South America
description Even though hemotrophic mycoplasma (hemoplasma) infections are well documented in a wide variety of hosts worldwide, there is a gap in the knowledge aobut hemoplasmas in rodents. This study aimed to molecularly survey and investigate the genetic diversity of hemoplasmas in rodents from Chile. Synanthropic and wild rodents (n = 74) were captured in the southern province of Valdivia (Corral, Valdivia, Riñihue, and Reumén localities). Spleen samples were submitted to a conventional PCR for hemotrophic Mycoplasma spp. targeting the 16S rRNA gene (800 bp), followed by sequencing, phylogenetic, and genetic diversity analyses. The overall occurrence of hemotrophic mycoplasmas in rodents from Valdivia was 24.5% (18/74) [95% CI (14.5; 34.1)]. Hemoplasmas were detected in Mus musculus (1/4), Rattus norvegicus (1/16), Abrothrix longipilis (7/13), A. olivaceo (6/8), and Oligoryzomys longicaudatus (3/10). The nucleotide polymorphism analysis of the targeted 16S rRNA region showed low diversity, with two genotypes and a high identity to the variants detected in wild rodents from Brazil. Hemoplasmas are described for the first time in rodents from Chile with a moderate occurrence and low 16S rDNA genetic diversity within the sampled rodent population. The detected hemoplasma genotypes were specific to rodents and were not shared with other mammals.
publishDate 2020
dc.date.none.fl_str_mv 2020-10-01
2021-06-25T10:34:49Z
2021-06-25T10:34:49Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3390/microorganisms8101493
Microorganisms, v. 8, n. 10, p. 1-16, 2020.
2076-2607
http://hdl.handle.net/11449/206589
10.3390/microorganisms8101493
2-s2.0-85091760154
url http://dx.doi.org/10.3390/microorganisms8101493
http://hdl.handle.net/11449/206589
identifier_str_mv Microorganisms, v. 8, n. 10, p. 1-16, 2020.
2076-2607
10.3390/microorganisms8101493
2-s2.0-85091760154
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Microorganisms
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 1-16
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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