Molecular survey and genetic diversity of hemoplasmas in rodents from Chile
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.3390/microorganisms8101493 http://hdl.handle.net/11449/206589 |
Resumo: | Even though hemotrophic mycoplasma (hemoplasma) infections are well documented in a wide variety of hosts worldwide, there is a gap in the knowledge aobut hemoplasmas in rodents. This study aimed to molecularly survey and investigate the genetic diversity of hemoplasmas in rodents from Chile. Synanthropic and wild rodents (n = 74) were captured in the southern province of Valdivia (Corral, Valdivia, Riñihue, and Reumén localities). Spleen samples were submitted to a conventional PCR for hemotrophic Mycoplasma spp. targeting the 16S rRNA gene (800 bp), followed by sequencing, phylogenetic, and genetic diversity analyses. The overall occurrence of hemotrophic mycoplasmas in rodents from Valdivia was 24.5% (18/74) [95% CI (14.5; 34.1)]. Hemoplasmas were detected in Mus musculus (1/4), Rattus norvegicus (1/16), Abrothrix longipilis (7/13), A. olivaceo (6/8), and Oligoryzomys longicaudatus (3/10). The nucleotide polymorphism analysis of the targeted 16S rRNA region showed low diversity, with two genotypes and a high identity to the variants detected in wild rodents from Brazil. Hemoplasmas are described for the first time in rodents from Chile with a moderate occurrence and low 16S rDNA genetic diversity within the sampled rodent population. The detected hemoplasma genotypes were specific to rodents and were not shared with other mammals. |
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Molecular survey and genetic diversity of hemoplasmas in rodents from Chile16S rRNAHemotrophic mycoplasmasRodentiaSouth AmericaEven though hemotrophic mycoplasma (hemoplasma) infections are well documented in a wide variety of hosts worldwide, there is a gap in the knowledge aobut hemoplasmas in rodents. This study aimed to molecularly survey and investigate the genetic diversity of hemoplasmas in rodents from Chile. Synanthropic and wild rodents (n = 74) were captured in the southern province of Valdivia (Corral, Valdivia, Riñihue, and Reumén localities). Spleen samples were submitted to a conventional PCR for hemotrophic Mycoplasma spp. targeting the 16S rRNA gene (800 bp), followed by sequencing, phylogenetic, and genetic diversity analyses. The overall occurrence of hemotrophic mycoplasmas in rodents from Valdivia was 24.5% (18/74) [95% CI (14.5; 34.1)]. Hemoplasmas were detected in Mus musculus (1/4), Rattus norvegicus (1/16), Abrothrix longipilis (7/13), A. olivaceo (6/8), and Oligoryzomys longicaudatus (3/10). The nucleotide polymorphism analysis of the targeted 16S rRNA region showed low diversity, with two genotypes and a high identity to the variants detected in wild rodents from Brazil. Hemoplasmas are described for the first time in rodents from Chile with a moderate occurrence and low 16S rDNA genetic diversity within the sampled rodent population. The detected hemoplasma genotypes were specific to rodents and were not shared with other mammals.Fondo Nacional de Desarrollo Científico y TecnológicoInstituto de Ciencias Clinicas Veterinarias Facultad de Ciencias Veterinarias Universidad Austral de ChileInsituto de Medicina Preventiva Veterinaria Facultad de Ciencias Veterinarias Universidad Austral de ChileInstituto de Microbiologia Clinica Facultad de Medicina Universidad Austral de ChileInstituto de Ciencia Animal Facultad de de Ciencias Veterinarias Universidad Austral de ChileDepartamento de Patologia UNESP Teriogenologia e Saúde Única Faculdade de Ciências Agrárias e Veterinarias Universidade Estadual Paulista (FCAV)One Health Center for Zoonoses and Tropical Veterinary Medicine Department of Biomedical Sciences Ross University School of Veterinary MedicineDepartamento de Patologia UNESP Teriogenologia e Saúde Única Faculdade de Ciências Agrárias e Veterinarias Universidade Estadual Paulista (FCAV)Fondo Nacional de Desarrollo Científico y Tecnológico: 1141070Fondo Nacional de Desarrollo Científico y Tecnológico: 1191462Universidad Austral de ChileUniversidade Estadual Paulista (Unesp)Ross University School of Veterinary MedicineAlabí, Amir SalvadorMonti, GustavoOtth, CarolaSepulveda-García, PaulinaSánchez-Hidalgo, Melissade Mello, Victória Valente Califre [UNESP]Machado, Rosangela Zacarias [UNESP]André, Marcos Rogério [UNESP]Bittencourt, PedroMüller, Ananda2021-06-25T10:34:49Z2021-06-25T10:34:49Z2020-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1-16http://dx.doi.org/10.3390/microorganisms8101493Microorganisms, v. 8, n. 10, p. 1-16, 2020.2076-2607http://hdl.handle.net/11449/20658910.3390/microorganisms81014932-s2.0-85091760154Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMicroorganismsinfo:eu-repo/semantics/openAccess2024-06-07T13:03:08Zoai:repositorio.unesp.br:11449/206589Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:52:28.051624Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Molecular survey and genetic diversity of hemoplasmas in rodents from Chile |
title |
Molecular survey and genetic diversity of hemoplasmas in rodents from Chile |
spellingShingle |
Molecular survey and genetic diversity of hemoplasmas in rodents from Chile Alabí, Amir Salvador 16S rRNA Hemotrophic mycoplasmas Rodentia South America |
title_short |
Molecular survey and genetic diversity of hemoplasmas in rodents from Chile |
title_full |
Molecular survey and genetic diversity of hemoplasmas in rodents from Chile |
title_fullStr |
Molecular survey and genetic diversity of hemoplasmas in rodents from Chile |
title_full_unstemmed |
Molecular survey and genetic diversity of hemoplasmas in rodents from Chile |
title_sort |
Molecular survey and genetic diversity of hemoplasmas in rodents from Chile |
author |
Alabí, Amir Salvador |
author_facet |
Alabí, Amir Salvador Monti, Gustavo Otth, Carola Sepulveda-García, Paulina Sánchez-Hidalgo, Melissa de Mello, Victória Valente Califre [UNESP] Machado, Rosangela Zacarias [UNESP] André, Marcos Rogério [UNESP] Bittencourt, Pedro Müller, Ananda |
author_role |
author |
author2 |
Monti, Gustavo Otth, Carola Sepulveda-García, Paulina Sánchez-Hidalgo, Melissa de Mello, Victória Valente Califre [UNESP] Machado, Rosangela Zacarias [UNESP] André, Marcos Rogério [UNESP] Bittencourt, Pedro Müller, Ananda |
author2_role |
author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidad Austral de Chile Universidade Estadual Paulista (Unesp) Ross University School of Veterinary Medicine |
dc.contributor.author.fl_str_mv |
Alabí, Amir Salvador Monti, Gustavo Otth, Carola Sepulveda-García, Paulina Sánchez-Hidalgo, Melissa de Mello, Victória Valente Califre [UNESP] Machado, Rosangela Zacarias [UNESP] André, Marcos Rogério [UNESP] Bittencourt, Pedro Müller, Ananda |
dc.subject.por.fl_str_mv |
16S rRNA Hemotrophic mycoplasmas Rodentia South America |
topic |
16S rRNA Hemotrophic mycoplasmas Rodentia South America |
description |
Even though hemotrophic mycoplasma (hemoplasma) infections are well documented in a wide variety of hosts worldwide, there is a gap in the knowledge aobut hemoplasmas in rodents. This study aimed to molecularly survey and investigate the genetic diversity of hemoplasmas in rodents from Chile. Synanthropic and wild rodents (n = 74) were captured in the southern province of Valdivia (Corral, Valdivia, Riñihue, and Reumén localities). Spleen samples were submitted to a conventional PCR for hemotrophic Mycoplasma spp. targeting the 16S rRNA gene (800 bp), followed by sequencing, phylogenetic, and genetic diversity analyses. The overall occurrence of hemotrophic mycoplasmas in rodents from Valdivia was 24.5% (18/74) [95% CI (14.5; 34.1)]. Hemoplasmas were detected in Mus musculus (1/4), Rattus norvegicus (1/16), Abrothrix longipilis (7/13), A. olivaceo (6/8), and Oligoryzomys longicaudatus (3/10). The nucleotide polymorphism analysis of the targeted 16S rRNA region showed low diversity, with two genotypes and a high identity to the variants detected in wild rodents from Brazil. Hemoplasmas are described for the first time in rodents from Chile with a moderate occurrence and low 16S rDNA genetic diversity within the sampled rodent population. The detected hemoplasma genotypes were specific to rodents and were not shared with other mammals. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-10-01 2021-06-25T10:34:49Z 2021-06-25T10:34:49Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.3390/microorganisms8101493 Microorganisms, v. 8, n. 10, p. 1-16, 2020. 2076-2607 http://hdl.handle.net/11449/206589 10.3390/microorganisms8101493 2-s2.0-85091760154 |
url |
http://dx.doi.org/10.3390/microorganisms8101493 http://hdl.handle.net/11449/206589 |
identifier_str_mv |
Microorganisms, v. 8, n. 10, p. 1-16, 2020. 2076-2607 10.3390/microorganisms8101493 2-s2.0-85091760154 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Microorganisms |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
1-16 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808129468860989440 |