Plant identification based on leaf midrib cross-section images using fractal descriptors
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0130014 http://hdl.handle.net/11449/129493 |
Resumo: | The correct identification of plants is a common necessity not only to researchers but also to the lay public. Recently, computational methods have been employed to facilitate this task, however, there are few studies front of the wide diversity of plants occurring in the world. This study proposes to analyse images obtained from cross-sections of leaf midrib using fractal descriptors. These descriptors are obtained from the fractal dimension of the object computed at a range of scales. In this way, they provide rich information regarding the spatial distribution of the analysed structure and, as a consequence, they measure the multiscale morphology of the object of interest. In Biology, such morphology is of great importance because it is related to evolutionary aspects and is successfully employed to characterize and discriminate among different biological structures. Here, the fractal descriptors are used to identify the species of plants based on the image of their leaves. A large number of samples are examined, being 606 leaf samples of 50 species from Brazilian flora. The results are compared to other imaging methods in the literature and demonstrate that fractal descriptors are precise and reliable in the taxonomic process of plant species identification. |
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Plant identification based on leaf midrib cross-section images using fractal descriptorsThe correct identification of plants is a common necessity not only to researchers but also to the lay public. Recently, computational methods have been employed to facilitate this task, however, there are few studies front of the wide diversity of plants occurring in the world. This study proposes to analyse images obtained from cross-sections of leaf midrib using fractal descriptors. These descriptors are obtained from the fractal dimension of the object computed at a range of scales. In this way, they provide rich information regarding the spatial distribution of the analysed structure and, as a consequence, they measure the multiscale morphology of the object of interest. In Biology, such morphology is of great importance because it is related to evolutionary aspects and is successfully employed to characterize and discriminate among different biological structures. Here, the fractal descriptors are used to identify the species of plants based on the image of their leaves. A large number of samples are examined, being 606 leaf samples of 50 species from Brazilian flora. The results are compared to other imaging methods in the literature and demonstrate that fractal descriptors are precise and reliable in the taxonomic process of plant species identification.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Univ Sao Paulo, Sao Carlos Inst Phys, BR-13560970 Sao Carlos, SP, BrazilUniv Sao Paulo, Inst Math &Comp Sci, BR-13560970 Sao Carlos, SP, BrazilNatl Univ Littoral, Fac Biochem &Biol Sci, Dept Phys, Santa Fe, ArgentinaUniv Estadual Paulista, UNESP, Fac Agr &Vet Sci, Dept Appl Biol, Jaboticabal, SP, BrazilUniv Estadual Paulista, UNESP, Fac Sci &Letters, Dept Biol Sci, Assis, SP, BrazilUniv Estadual Paulista, UNESP, Fac Agr &Vet Sci, Dept Appl Biol, Jaboticabal, SP, BrazilUniv Estadual Paulista, UNESP, Fac Sci &Letters, Dept Biol Sci, Assis, SP, BrazilFAPESP: 2011/21467-9FAPESP: 2012/19143-3FAPESP: 2011/23112-3FAPESP: 2011/01523-1CNPq: 307797/2014-7CNPq: 484312/2013-8Public Library ScienceUniversidade de São Paulo (USP)Natl Univ LittoralUniversidade Estadual Paulista (Unesp)Silva, Nubia Rosa daFlorindo, Joao BatistaGomez, Maria CeciliaRossatto, Davi Rodrigo [UNESP]Kolb, Rosana Marta [UNESP]Bruno, Odemir Martinez2015-10-21T21:12:53Z2015-10-21T21:12:53Z2015-06-19info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1-14application/pdfhttp://journals.plos.org/plosone/article?id=10.1371/journal.pone.0130014Plos One. San Francisco: Public Library Science, v. 10, n. 6, p. 1-14, 2015.1932-6203http://hdl.handle.net/11449/12949310.1371/journal.pone.0130014WOS:000356835000083WOS000356835000083.pdf05886661725016650000-0003-3841-5597Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPlos One2.7661,164info:eu-repo/semantics/openAccess2024-06-13T17:37:58Zoai:repositorio.unesp.br:11449/129493Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T13:53:11.264907Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Plant identification based on leaf midrib cross-section images using fractal descriptors |
title |
Plant identification based on leaf midrib cross-section images using fractal descriptors |
spellingShingle |
Plant identification based on leaf midrib cross-section images using fractal descriptors Silva, Nubia Rosa da |
title_short |
Plant identification based on leaf midrib cross-section images using fractal descriptors |
title_full |
Plant identification based on leaf midrib cross-section images using fractal descriptors |
title_fullStr |
Plant identification based on leaf midrib cross-section images using fractal descriptors |
title_full_unstemmed |
Plant identification based on leaf midrib cross-section images using fractal descriptors |
title_sort |
Plant identification based on leaf midrib cross-section images using fractal descriptors |
author |
Silva, Nubia Rosa da |
author_facet |
Silva, Nubia Rosa da Florindo, Joao Batista Gomez, Maria Cecilia Rossatto, Davi Rodrigo [UNESP] Kolb, Rosana Marta [UNESP] Bruno, Odemir Martinez |
author_role |
author |
author2 |
Florindo, Joao Batista Gomez, Maria Cecilia Rossatto, Davi Rodrigo [UNESP] Kolb, Rosana Marta [UNESP] Bruno, Odemir Martinez |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade de São Paulo (USP) Natl Univ Littoral Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Silva, Nubia Rosa da Florindo, Joao Batista Gomez, Maria Cecilia Rossatto, Davi Rodrigo [UNESP] Kolb, Rosana Marta [UNESP] Bruno, Odemir Martinez |
description |
The correct identification of plants is a common necessity not only to researchers but also to the lay public. Recently, computational methods have been employed to facilitate this task, however, there are few studies front of the wide diversity of plants occurring in the world. This study proposes to analyse images obtained from cross-sections of leaf midrib using fractal descriptors. These descriptors are obtained from the fractal dimension of the object computed at a range of scales. In this way, they provide rich information regarding the spatial distribution of the analysed structure and, as a consequence, they measure the multiscale morphology of the object of interest. In Biology, such morphology is of great importance because it is related to evolutionary aspects and is successfully employed to characterize and discriminate among different biological structures. Here, the fractal descriptors are used to identify the species of plants based on the image of their leaves. A large number of samples are examined, being 606 leaf samples of 50 species from Brazilian flora. The results are compared to other imaging methods in the literature and demonstrate that fractal descriptors are precise and reliable in the taxonomic process of plant species identification. |
publishDate |
2015 |
dc.date.none.fl_str_mv |
2015-10-21T21:12:53Z 2015-10-21T21:12:53Z 2015-06-19 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0130014 Plos One. San Francisco: Public Library Science, v. 10, n. 6, p. 1-14, 2015. 1932-6203 http://hdl.handle.net/11449/129493 10.1371/journal.pone.0130014 WOS:000356835000083 WOS000356835000083.pdf 0588666172501665 0000-0003-3841-5597 |
url |
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0130014 http://hdl.handle.net/11449/129493 |
identifier_str_mv |
Plos One. San Francisco: Public Library Science, v. 10, n. 6, p. 1-14, 2015. 1932-6203 10.1371/journal.pone.0130014 WOS:000356835000083 WOS000356835000083.pdf 0588666172501665 0000-0003-3841-5597 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Plos One 2.766 1,164 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
1-14 application/pdf |
dc.publisher.none.fl_str_mv |
Public Library Science |
publisher.none.fl_str_mv |
Public Library Science |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808128287099060224 |