Usefulness of Mycobacterium tuberculosis molecular typing in a tuberculosis low-endemic agro-industrial setting of Brazil
Autor(a) principal: | |
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Data de Publicação: | 2008 |
Outros Autores: | , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://www0.nih.go.jp/JJID/61/231.pdf http://hdl.handle.net/11449/70473 |
Resumo: | To highlight the transmission and major phylogenetic clades of Mycobacterium tuberculosis, a retrospective study was carried out at two health facilities in a small agro-industrial area in São Paulo, Brazil, that has a low tuberculosis incidence rate. IS6110-RFLP and spoligotyping were performed on the isolates, with the former revealing that 31.3% (35/112) of strains were clustered. Epidemiological links were found in 16 of the 35 clustered patients and were associated with transmission among patients living in public housing. Spoligotyping grouped 62.8% of the strains. The T genetic family predominated among the isolates. Of interest is that five strains had a pattern characteristic of African or Asian origin (ST535), and two others were of the rare localized type ST1888 (BRA, VEN). In addition, three new types-1889, 1890, and 1891-were identified. Spoligotyping showed that some ST may be circulating to or from Brazil, and RFLP revealed ongoing transmission in inadequately ventilated public-housing buildings. This may point to a failure in tuberculosis control policy. |
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Usefulness of Mycobacterium tuberculosis molecular typing in a tuberculosis low-endemic agro-industrial setting of BrazilpyrazinamidestreptomycinAfricaAsiabacterial strainbacterial transmissionbacterium isolateBrazilcommunity livingdrug sensitivitygeographic originhealth care facilityhumanincidenceindustrial areamolecular typingMycobacterium tuberculosisrestriction fragment length polymorphismretrospective studyspoligotypingstrain identificationtuberculosisDNA Transposable ElementsFemaleHumansIncidenceMaleOligonucleotidesPolymorphism, Restriction Fragment LengthPublic HousingTuberculosis, PulmonaryTo highlight the transmission and major phylogenetic clades of Mycobacterium tuberculosis, a retrospective study was carried out at two health facilities in a small agro-industrial area in São Paulo, Brazil, that has a low tuberculosis incidence rate. IS6110-RFLP and spoligotyping were performed on the isolates, with the former revealing that 31.3% (35/112) of strains were clustered. Epidemiological links were found in 16 of the 35 clustered patients and were associated with transmission among patients living in public housing. Spoligotyping grouped 62.8% of the strains. The T genetic family predominated among the isolates. Of interest is that five strains had a pattern characteristic of African or Asian origin (ST535), and two others were of the rare localized type ST1888 (BRA, VEN). In addition, three new types-1889, 1890, and 1891-were identified. Spoligotyping showed that some ST may be circulating to or from Brazil, and RFLP revealed ongoing transmission in inadequately ventilated public-housing buildings. This may point to a failure in tuberculosis control policy.Faculdade de Ciéncias Farmacêuticas Universidade Estadual Paulista, São PauloHospital Universitário Pedro Ernesto Universidade Federal do Rio de Janeiro, Rio de JaneiroLaboratório de Microbiologia Celular Instituto Oswaldo Cruz/Fiocruz, Av. Brasil 4365, Rio de Janeiro 21045-900Serviço Especial de Saúde de Araraquara Américo Brasilienses, São PauloInstituto Adolfo Lutz Américo Brasilienses, São PauloInstituto de Microbiologia Universidade Federal do Rio de Janeiro, Rio de JaneiroHospital Nestor Goulart Reis Américo Brasilienses, São PauloInstitut of Tropical Medicine, AntwerpFaculdade de Ciéncias Farmacêuticas Universidade Estadual Paulista, São PauloUniversidade Estadual Paulista (Unesp)Universidade Federal do Rio de Janeiro (UFRJ)Instituto Oswaldo Cruz/FiocruzAmérico BrasiliensesInstitut of Tropical MedicineMalaspina, Ana Carolina [UNESP]Cavalcanti, Hebe RodriguesLeite, Clarice Queico Fujimura [UNESP]Machado, Silvia Maria AlmeidaViana, Brunilde Helena JungSilva, Rosangela Maria GasparetoHage, Eduardo FerrazFigueiredo, Walter MachadoMarques, ElisabethFerrazoli, LucilaineArbex, MarcosLessi, MarcioFonseca, Leila S.Rigouts, LeenSaad, Maria Helena Féres [UNESP]2014-05-27T11:23:36Z2014-05-27T11:23:36Z2008-07-02info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article231-233application/pdfhttp://www0.nih.go.jp/JJID/61/231.pdfJapanese Journal of Infectious Diseases, v. 61, n. 3, p. 231-233, 2008.1344-6304http://hdl.handle.net/11449/704732-s2.0-458490847062-s2.0-45849084706.pdf2114570774349859Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJapanese Journal of Infectious Diseases1.0140,595info:eu-repo/semantics/openAccess2024-06-24T13:07:13Zoai:repositorio.unesp.br:11449/70473Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:27:42.175066Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Usefulness of Mycobacterium tuberculosis molecular typing in a tuberculosis low-endemic agro-industrial setting of Brazil |
title |
Usefulness of Mycobacterium tuberculosis molecular typing in a tuberculosis low-endemic agro-industrial setting of Brazil |
spellingShingle |
Usefulness of Mycobacterium tuberculosis molecular typing in a tuberculosis low-endemic agro-industrial setting of Brazil Malaspina, Ana Carolina [UNESP] pyrazinamide streptomycin Africa Asia bacterial strain bacterial transmission bacterium isolate Brazil community living drug sensitivity geographic origin health care facility human incidence industrial area molecular typing Mycobacterium tuberculosis restriction fragment length polymorphism retrospective study spoligotyping strain identification tuberculosis DNA Transposable Elements Female Humans Incidence Male Oligonucleotides Polymorphism, Restriction Fragment Length Public Housing Tuberculosis, Pulmonary |
title_short |
Usefulness of Mycobacterium tuberculosis molecular typing in a tuberculosis low-endemic agro-industrial setting of Brazil |
title_full |
Usefulness of Mycobacterium tuberculosis molecular typing in a tuberculosis low-endemic agro-industrial setting of Brazil |
title_fullStr |
Usefulness of Mycobacterium tuberculosis molecular typing in a tuberculosis low-endemic agro-industrial setting of Brazil |
title_full_unstemmed |
Usefulness of Mycobacterium tuberculosis molecular typing in a tuberculosis low-endemic agro-industrial setting of Brazil |
title_sort |
Usefulness of Mycobacterium tuberculosis molecular typing in a tuberculosis low-endemic agro-industrial setting of Brazil |
author |
Malaspina, Ana Carolina [UNESP] |
author_facet |
Malaspina, Ana Carolina [UNESP] Cavalcanti, Hebe Rodrigues Leite, Clarice Queico Fujimura [UNESP] Machado, Silvia Maria Almeida Viana, Brunilde Helena Jung Silva, Rosangela Maria Gaspareto Hage, Eduardo Ferraz Figueiredo, Walter Machado Marques, Elisabeth Ferrazoli, Lucilaine Arbex, Marcos Lessi, Marcio Fonseca, Leila S. Rigouts, Leen Saad, Maria Helena Féres [UNESP] |
author_role |
author |
author2 |
Cavalcanti, Hebe Rodrigues Leite, Clarice Queico Fujimura [UNESP] Machado, Silvia Maria Almeida Viana, Brunilde Helena Jung Silva, Rosangela Maria Gaspareto Hage, Eduardo Ferraz Figueiredo, Walter Machado Marques, Elisabeth Ferrazoli, Lucilaine Arbex, Marcos Lessi, Marcio Fonseca, Leila S. Rigouts, Leen Saad, Maria Helena Féres [UNESP] |
author2_role |
author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidade Federal do Rio de Janeiro (UFRJ) Instituto Oswaldo Cruz/Fiocruz Américo Brasilienses Institut of Tropical Medicine |
dc.contributor.author.fl_str_mv |
Malaspina, Ana Carolina [UNESP] Cavalcanti, Hebe Rodrigues Leite, Clarice Queico Fujimura [UNESP] Machado, Silvia Maria Almeida Viana, Brunilde Helena Jung Silva, Rosangela Maria Gaspareto Hage, Eduardo Ferraz Figueiredo, Walter Machado Marques, Elisabeth Ferrazoli, Lucilaine Arbex, Marcos Lessi, Marcio Fonseca, Leila S. Rigouts, Leen Saad, Maria Helena Féres [UNESP] |
dc.subject.por.fl_str_mv |
pyrazinamide streptomycin Africa Asia bacterial strain bacterial transmission bacterium isolate Brazil community living drug sensitivity geographic origin health care facility human incidence industrial area molecular typing Mycobacterium tuberculosis restriction fragment length polymorphism retrospective study spoligotyping strain identification tuberculosis DNA Transposable Elements Female Humans Incidence Male Oligonucleotides Polymorphism, Restriction Fragment Length Public Housing Tuberculosis, Pulmonary |
topic |
pyrazinamide streptomycin Africa Asia bacterial strain bacterial transmission bacterium isolate Brazil community living drug sensitivity geographic origin health care facility human incidence industrial area molecular typing Mycobacterium tuberculosis restriction fragment length polymorphism retrospective study spoligotyping strain identification tuberculosis DNA Transposable Elements Female Humans Incidence Male Oligonucleotides Polymorphism, Restriction Fragment Length Public Housing Tuberculosis, Pulmonary |
description |
To highlight the transmission and major phylogenetic clades of Mycobacterium tuberculosis, a retrospective study was carried out at two health facilities in a small agro-industrial area in São Paulo, Brazil, that has a low tuberculosis incidence rate. IS6110-RFLP and spoligotyping were performed on the isolates, with the former revealing that 31.3% (35/112) of strains were clustered. Epidemiological links were found in 16 of the 35 clustered patients and were associated with transmission among patients living in public housing. Spoligotyping grouped 62.8% of the strains. The T genetic family predominated among the isolates. Of interest is that five strains had a pattern characteristic of African or Asian origin (ST535), and two others were of the rare localized type ST1888 (BRA, VEN). In addition, three new types-1889, 1890, and 1891-were identified. Spoligotyping showed that some ST may be circulating to or from Brazil, and RFLP revealed ongoing transmission in inadequately ventilated public-housing buildings. This may point to a failure in tuberculosis control policy. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-07-02 2014-05-27T11:23:36Z 2014-05-27T11:23:36Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://www0.nih.go.jp/JJID/61/231.pdf Japanese Journal of Infectious Diseases, v. 61, n. 3, p. 231-233, 2008. 1344-6304 http://hdl.handle.net/11449/70473 2-s2.0-45849084706 2-s2.0-45849084706.pdf 2114570774349859 |
url |
http://www0.nih.go.jp/JJID/61/231.pdf http://hdl.handle.net/11449/70473 |
identifier_str_mv |
Japanese Journal of Infectious Diseases, v. 61, n. 3, p. 231-233, 2008. 1344-6304 2-s2.0-45849084706 2-s2.0-45849084706.pdf 2114570774349859 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Japanese Journal of Infectious Diseases 1.014 0,595 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
231-233 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128514727084032 |