Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1093/biolinnean/bly093 http://hdl.handle.net/11449/160537 |
Resumo: | Despite encompassing a relatively small geographical area, montane regions harbour disproportionately high levels of species diversity and endemism. Nonetheless, relatively little is known about the evolutionary mechanisms that ultimately lead to montane diversity. In this study, we used target capture of ultraconserved elements to investigate the phylogenetic relationships and diversification patterns of Melanophryniscus (Bufonidae) and Brachycephalus (Brachycephalidae), two frog genera that occur in sky islands of the southern Atlantic Forest of Brazil. Specifically, we tested whether diversification of montane species in these genera could be explained by a single climatic shift leading to isolation in sky islands, followed by climatic stability that maintained populations in allopatry. In both genera, the topologies inferred using concatenation and coalescent-based methods were concordant and had strong nodal support, except for a few recent splits, which nevertheless tended to be supported by more informative loci. Estimation of divergence time of a combined dataset using both genera is consistent with a concordant timing of their diversification. These results support the scenario of diversification by isolation in sky islands and suggest that allopatry attributable to climatic gradients in montane regions is an important mechanism for generating species diversity and endemism in these regions. |
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Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stabilityBrachycephaluscoalescentMelanophryniscustarget enrichmentultraconserved elementsDespite encompassing a relatively small geographical area, montane regions harbour disproportionately high levels of species diversity and endemism. Nonetheless, relatively little is known about the evolutionary mechanisms that ultimately lead to montane diversity. In this study, we used target capture of ultraconserved elements to investigate the phylogenetic relationships and diversification patterns of Melanophryniscus (Bufonidae) and Brachycephalus (Brachycephalidae), two frog genera that occur in sky islands of the southern Atlantic Forest of Brazil. Specifically, we tested whether diversification of montane species in these genera could be explained by a single climatic shift leading to isolation in sky islands, followed by climatic stability that maintained populations in allopatry. In both genera, the topologies inferred using concatenation and coalescent-based methods were concordant and had strong nodal support, except for a few recent splits, which nevertheless tended to be supported by more informative loci. Estimation of divergence time of a combined dataset using both genera is consistent with a concordant timing of their diversification. These results support the scenario of diversification by isolation in sky islands and suggest that allopatry attributable to climatic gradients in montane regions is an important mechanism for generating species diversity and endemism in these regions.Fundacao Grupo Boticario de Protecao a NaturezaConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Univ Fed Parana, Dept Zool, Curitiba, Parana, BrazilMater Nat Inst Estudos Ambientais, Curitiba, Parana, BrazilLouisiana State Univ, Dept Biol Sci, Baton Rouge, LA 70803 USALouisiana State Univ, Museum Nat Sci, Baton Rouge, LA 70803 USAPontificia Univ Catolica Parana, Escola Ciencias Vida, Curitiba, Parana, BrazilUniv Estadual Paulista, Inst Biociencias, Sao Paulo, BrazilOccidental Coll, Moore Lab Zool, Los Angeles, CA 90041 USAUniv Estadual Paulista, Inst Biociencias, Sao Paulo, BrazilFundacao Grupo Boticario de Protecao a Natureza: A0010_2014CNPq: 301636/2016-8Oxford Univ PressUniv Fed ParanaMater Nat Inst Estudos AmbientaisLouisiana State UnivPontificia Univ Catolica ParanaUniversidade Estadual Paulista (Unesp)Occidental CollPie, Marcio R.Faircloth, Brant C.Ribeiro, Luiz F.Bornschein, Marcos R. [UNESP]McCormack, John E.2018-11-26T16:04:53Z2018-11-26T16:04:53Z2018-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article72-82http://dx.doi.org/10.1093/biolinnean/bly093Biological Journal Of The Linnean Society. Oxford: Oxford Univ Press, v. 125, n. 1, p. 72-82, 2018.0024-4066http://hdl.handle.net/11449/16053710.1093/biolinnean/bly093WOS:000442937000007Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBiological Journal Of The Linnean Society1,175info:eu-repo/semantics/openAccess2021-10-23T11:33:42Zoai:repositorio.unesp.br:11449/160537Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T21:43:35.503296Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
title |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
spellingShingle |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability Pie, Marcio R. Brachycephalus coalescent Melanophryniscus target enrichment ultraconserved elements |
title_short |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
title_full |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
title_fullStr |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
title_full_unstemmed |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
title_sort |
Phylogenomics of montane frogs of the Brazilian Atlantic Forest is consistent with isolation in sky islands followed by climatic stability |
author |
Pie, Marcio R. |
author_facet |
Pie, Marcio R. Faircloth, Brant C. Ribeiro, Luiz F. Bornschein, Marcos R. [UNESP] McCormack, John E. |
author_role |
author |
author2 |
Faircloth, Brant C. Ribeiro, Luiz F. Bornschein, Marcos R. [UNESP] McCormack, John E. |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Univ Fed Parana Mater Nat Inst Estudos Ambientais Louisiana State Univ Pontificia Univ Catolica Parana Universidade Estadual Paulista (Unesp) Occidental Coll |
dc.contributor.author.fl_str_mv |
Pie, Marcio R. Faircloth, Brant C. Ribeiro, Luiz F. Bornschein, Marcos R. [UNESP] McCormack, John E. |
dc.subject.por.fl_str_mv |
Brachycephalus coalescent Melanophryniscus target enrichment ultraconserved elements |
topic |
Brachycephalus coalescent Melanophryniscus target enrichment ultraconserved elements |
description |
Despite encompassing a relatively small geographical area, montane regions harbour disproportionately high levels of species diversity and endemism. Nonetheless, relatively little is known about the evolutionary mechanisms that ultimately lead to montane diversity. In this study, we used target capture of ultraconserved elements to investigate the phylogenetic relationships and diversification patterns of Melanophryniscus (Bufonidae) and Brachycephalus (Brachycephalidae), two frog genera that occur in sky islands of the southern Atlantic Forest of Brazil. Specifically, we tested whether diversification of montane species in these genera could be explained by a single climatic shift leading to isolation in sky islands, followed by climatic stability that maintained populations in allopatry. In both genera, the topologies inferred using concatenation and coalescent-based methods were concordant and had strong nodal support, except for a few recent splits, which nevertheless tended to be supported by more informative loci. Estimation of divergence time of a combined dataset using both genera is consistent with a concordant timing of their diversification. These results support the scenario of diversification by isolation in sky islands and suggest that allopatry attributable to climatic gradients in montane regions is an important mechanism for generating species diversity and endemism in these regions. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-11-26T16:04:53Z 2018-11-26T16:04:53Z 2018-09-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1093/biolinnean/bly093 Biological Journal Of The Linnean Society. Oxford: Oxford Univ Press, v. 125, n. 1, p. 72-82, 2018. 0024-4066 http://hdl.handle.net/11449/160537 10.1093/biolinnean/bly093 WOS:000442937000007 |
url |
http://dx.doi.org/10.1093/biolinnean/bly093 http://hdl.handle.net/11449/160537 |
identifier_str_mv |
Biological Journal Of The Linnean Society. Oxford: Oxford Univ Press, v. 125, n. 1, p. 72-82, 2018. 0024-4066 10.1093/biolinnean/bly093 WOS:000442937000007 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Biological Journal Of The Linnean Society 1,175 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
72-82 |
dc.publisher.none.fl_str_mv |
Oxford Univ Press |
publisher.none.fl_str_mv |
Oxford Univ Press |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129350768263168 |