Polimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, Brasil

Detalhes bibliográficos
Autor(a) principal: VILAÇA, Luciana Florêncio
Data de Publicação: 2017
Tipo de documento: Tese
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UFRPE
Texto Completo: http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6947
Resumo: The program of selection of goats with milk aptitude has been focused on the increase in milk quantity, neglecting factors related to resistance to diseases and milk composition. This behavior has led to studies aimed at the rapid detection of microorganisms and the identification of genes or chromosomal regions related to infectious diseases of the mammary gland. The objective of the present thesis was to detect Mycoplasma agalactiae (Ma) and Mycoplasma mycoides cluster (Mmcluster) in goat milk samples and to evaluate the composition and counting of somatic cells from Ma and Mmcluster positive animals (Experiment 1). In addition, we sought to identify Goat Lymphocyte Antigen (GoLA-DRB.2) gene polymorphisms and to associate them with goat milk characteristics (Experiment 2). To perform the experiment 1, 373 samples of goat milk of different races belonging to herds located in the states of Pernambuco and Paraiba were collected. The genomic DNA of the milk samples was extracted by the silica / guanidine isothiocyanate method, followed by the generic and species-specific amplification by polymerase chain reaction. Identification of the presence or absence of gene products was performed by direct observation of the bands of the PCR products visualized on electrophoresis gel. Analysis of variance and comparison tests of averages were performed to verify the effects of positivity on somatic cell composition and counting characteristics. The frequencies for Ma and Mmcluster were 43.21% and 5.70%, respectively, in the herds evaluated. The breeding system was considered as risk factors (p <0.001) and the racial pattern (p<0.001). Ma positive samples were detected in all genetic groups, with higher occurrence in the and Marota race. Positive samples for Mmcluster were only observed in Moxotó (18.28%), Parda Sertaneja (1.92%) and SPRD (3.12%) rats. In the study of association between positivity and milk composition, a statistical difference was observed for protein, casein and somatic cell counts. The detection of Mycoplasma in samples of goat milk suggests the introduction of infected animals in the evaluated herds, as well as the possible contact with the etiological agents in fairs and exhibitions. In addition, the breeding system adopted on the property influences the spread of the infection in the herd. For the execution of Experiment 2, a total of 181 female goats of different races from the state of Pernambuco and Paraiba were selected. Milk samples were harvested and extracted from genomic DNA as described in Experiment 1. The genotyping of the animals for the 285bp fragment of the GoLA-DRB.2 gene was the result of amplification by PCR-RFLP technique, using the enzymes of Restriction PstI and TaqI. The allelic frequency found for the total population using the PstI enzyme was A equal to 0.7254 and B at 0.2746, with the frequencies of the AA, AB and BB genotypes being 0.6740, 0.0387 and 0, 2873 respectively. The allele frequencies obtained from the digestion with the TaqI enzyme were C = 0.8149 and D = 0.1851, with the frequencies of the genotypes: 0.7403 (CC), 0.1492 (CD) and 0.1105 ( DD), with predominance of the CC genotype in all the racial standards evaluated. The observed Heterozygosity values were lower than those found for expected Heterozygosity in all tested populations with herds out of Hardy-Weinberg equilibrium. There was significant genetic variation between races, among individuals of the same race and within the population. There was no significant difference between genotypes and haplotype patterns on the values of fat, protein, lactose, total solids, casein and somatic cell counts. The GoLA-DRB.2 gene was polymorphic in the evaluation with the PstI and TaqI enzymes studied but had no effect on any of the somatic cell composition and counting characteristics evaluated.
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spelling BARBOSA, Severino Benone PaesSILVA, Elizabete Rodrigues daSANTORO, Kleber RégisFRAGA, Angelina BossiBRASIL, Lúcia Helena de AlbuquerqueMAIA, Maria de Mascena Dinizhttp://lattes.cnpq.br/0738544028762008VILAÇA, Luciana Florêncio2017-05-29T14:12:31Z2017-02-21VILAÇA, Luciana Florêncio. Polimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, Brasil. 2017. 85 f. Tese (Programa de Pós-Graduação em Zootecnia) - Universidade Federal Rural de Pernambuco, Recife.http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6947The program of selection of goats with milk aptitude has been focused on the increase in milk quantity, neglecting factors related to resistance to diseases and milk composition. This behavior has led to studies aimed at the rapid detection of microorganisms and the identification of genes or chromosomal regions related to infectious diseases of the mammary gland. The objective of the present thesis was to detect Mycoplasma agalactiae (Ma) and Mycoplasma mycoides cluster (Mmcluster) in goat milk samples and to evaluate the composition and counting of somatic cells from Ma and Mmcluster positive animals (Experiment 1). In addition, we sought to identify Goat Lymphocyte Antigen (GoLA-DRB.2) gene polymorphisms and to associate them with goat milk characteristics (Experiment 2). To perform the experiment 1, 373 samples of goat milk of different races belonging to herds located in the states of Pernambuco and Paraiba were collected. The genomic DNA of the milk samples was extracted by the silica / guanidine isothiocyanate method, followed by the generic and species-specific amplification by polymerase chain reaction. Identification of the presence or absence of gene products was performed by direct observation of the bands of the PCR products visualized on electrophoresis gel. Analysis of variance and comparison tests of averages were performed to verify the effects of positivity on somatic cell composition and counting characteristics. The frequencies for Ma and Mmcluster were 43.21% and 5.70%, respectively, in the herds evaluated. The breeding system was considered as risk factors (p <0.001) and the racial pattern (p<0.001). Ma positive samples were detected in all genetic groups, with higher occurrence in the and Marota race. Positive samples for Mmcluster were only observed in Moxotó (18.28%), Parda Sertaneja (1.92%) and SPRD (3.12%) rats. In the study of association between positivity and milk composition, a statistical difference was observed for protein, casein and somatic cell counts. The detection of Mycoplasma in samples of goat milk suggests the introduction of infected animals in the evaluated herds, as well as the possible contact with the etiological agents in fairs and exhibitions. In addition, the breeding system adopted on the property influences the spread of the infection in the herd. For the execution of Experiment 2, a total of 181 female goats of different races from the state of Pernambuco and Paraiba were selected. Milk samples were harvested and extracted from genomic DNA as described in Experiment 1. The genotyping of the animals for the 285bp fragment of the GoLA-DRB.2 gene was the result of amplification by PCR-RFLP technique, using the enzymes of Restriction PstI and TaqI. The allelic frequency found for the total population using the PstI enzyme was A equal to 0.7254 and B at 0.2746, with the frequencies of the AA, AB and BB genotypes being 0.6740, 0.0387 and 0, 2873 respectively. The allele frequencies obtained from the digestion with the TaqI enzyme were C = 0.8149 and D = 0.1851, with the frequencies of the genotypes: 0.7403 (CC), 0.1492 (CD) and 0.1105 ( DD), with predominance of the CC genotype in all the racial standards evaluated. The observed Heterozygosity values were lower than those found for expected Heterozygosity in all tested populations with herds out of Hardy-Weinberg equilibrium. There was significant genetic variation between races, among individuals of the same race and within the population. There was no significant difference between genotypes and haplotype patterns on the values of fat, protein, lactose, total solids, casein and somatic cell counts. The GoLA-DRB.2 gene was polymorphic in the evaluation with the PstI and TaqI enzymes studied but had no effect on any of the somatic cell composition and counting characteristics evaluated.O programa de seleção de caprinos com aptidão leiteira tem sido, basicamente, voltado ao aumento na quantidade de leite, negligenciando fatores relacionados à resistência a doenças e à composição do leite. Este comportamento vem ocasionando o direcionamento a estudos voltados à rápida detecção de micro-organismos e à identificação de genes ou regiões cromossômicas relacionadas a doenças infectocontagiosas da glândula mamária. Diante do exposto, a presente tese teve como objetivo inicial, detectar Mycoplasma agalactiae (Ma) e Mycoplasma mycoides cluster (Mmcluster) em amostras de leite caprino e avaliar a composição e a contagem de células somáticas provenientes de animais positivos para Ma e Mmcluster (Experimento 1). Além disso, buscou-se identificar os polimorfismos do gene Goat Lymphocyte Antigen (GoLA-DRB.2) e associar com características do leite de cabra (Experimento 2). Para realização do Experimento 1, foram colhidas 373 amostras de leite de caprinos de diferentes raças pertencentes a rebanhos localizados nos estados de Pernambuco e da Paraíba. O DNA genômico das amostras de leite foi extraído pelo método sílica/isotiocianato de guanidina, seguida da amplificação genérica e espécie-específica por reação em cadeia da polimerase. A identificação da presença ou não de produtos gênicos foi realizada através de observação direta das bandas dos produtos de PCR visualizados em gel de eletroforese. Análises de variância e testes de comparação de médias foram realizados para verificar os efeitos da positividade sobre as características de composição e contagem de células somáticas. As frequências para Ma e Mmcluster foram de 43,21% e 5,70%, nos rebanhos avaliados, respectivamente. Foram considerados fatores de risco o sistema de criação (p<0,001) e o padrão racial (p<0,001). Em todos os grupos genéticos foram detectadas amostras positivas para Ma, sendo observada maior ocorrência na raça Marota. Amostras positivas para Mmc só foram observadas em animais das raças Moxotó (18,28%), Parda Sertaneja (1,92%) e SPRD (3,12%). No estudo de associação entre a positividade e composição do leite, observou-se diferença estatística para as médias de proteína, caseína e contagem de células somáticas. A detecção de Mycoplasma em amostras de leite caprino sugere a introdução de animais infectados nos rebanhos avaliados, como também o possível contato com os agentes etiológicos em feiras e exposições. Além disso, o sistema de criação adotado na propriedade influencia a disseminação da infecção no rebanho. Para execução do Experimento 2, um total de 181 fêmeas caprinas de diferentes raças provenientes do estado de Pernambuco e da Paraíba foram selecionadas. Amostras de leite foram colhidas e submetidas à extração do DNA genômico como descrito no Experimento 1. A genotipagem dos animais para o fragmento de 285 pb do gene GoLADRB. 2 foi resultante da amplificação pela técnica de PCR-RFLP, utilizando as enzimas de restrição PstI e TaqI. A frequência alélica encontrada para a população total com a utilização da enzima PstI foi de A igual a 0,7254 e B a 0,2746, sendo as frequências dos genótipos AA, AB e BB de 0,6740, 0,0387 e 0,2873, respectivamente. As frequências alélicas obtidas a partir da digestão com a enzima TaqI foi de C = 0,8149 e D = 0,1851, sendo as frequências dos genótipos: 0,7403 (CC), 0,1492 (CD) e 0,1105 (DD), com predominância do genótipo CC em todos os padrões raciais avaliados. Os valores da Heterozigosidade observada foram menores do que os encontrado para Heterozigosidade esperada em todas as populações testadas, com rebanhos fora do equilíbrio de Hardy-Weinberg. Houve variação genética significativa entre raças, entre indivíduos da mesma raça e dentro da população. Não houve diferença significativa entre os genótipos e os padrões de haplótipos sobre os valores de gordura, proteína, lactose, sólidos totais, caseína e contagem de células somáticas. O gene GoLA-DRB.2 foi polimórfico na avaliação com as enzimas PstI e TaqI estudadas, mas não desempenhou efeitos sobre nenhumas das características de composição e contagem de células somáticas avaliadas.Submitted by Mario BC (mario@bc.ufrpe.br) on 2017-05-29T14:12:30Z No. of bitstreams: 1 Luciana Florencio Vilaca.pdf: 780940 bytes, checksum: f71ece6a621a081642573fed11311887 (MD5)Made available in DSpace on 2017-05-29T14:12:31Z (GMT). No. of bitstreams: 1 Luciana Florencio Vilaca.pdf: 780940 bytes, checksum: f71ece6a621a081642573fed11311887 (MD5) Previous issue date: 2017-02-21Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESConselho Nacional de Pesquisa e Desenvolvimento Científico e Tecnológico - CNPqapplication/pdfporUniversidade Federal Rural de PernambucoPrograma de Pós-Graduação em ZootecniaUFRPEBrasilDepartamento de ZootecniaMycoplasma agalactiaeMycoplasma mycoidesGoat Lymphocyte AntigenPolimorfismoAgalactia contagiosaCaprinoCIENCIAS AGRARIAS::ZOOTECNIAPolimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, BrasilPolymorphism of the GoLA-DRB.2 gene and detection of Mycoplasma agalactiae and Mycoplasma mycoides cluster in goat herds in the states of Pernambuco and Paraíba, Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis-3881065194686295060600600600600600-768565415068297243213468589812708456022075167498588264571-2555911436985713659info:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UFRPEinstname:Universidade Federal Rural de Pernambuco (UFRPE)instacron:UFRPELICENSElicense.txtlicense.txttext/plain; charset=utf-82165http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/6947/1/license.txtbd3efa91386c1718a7f26a329fdcb468MD51ORIGINALLuciana Florencio Vilaca.pdfLuciana Florencio Vilaca.pdfapplication/pdf780940http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/6947/2/Luciana+Florencio+Vilaca.pdff71ece6a621a081642573fed11311887MD52tede2/69472017-05-29 11:12:31.301oai:tede2: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Biblioteca Digital de Teses e Dissertaçõeshttp://www.tede2.ufrpe.br:8080/tede/PUBhttp://www.tede2.ufrpe.br:8080/oai/requestbdtd@ufrpe.br ||bdtd@ufrpe.bropendoar:2017-05-29T14:12:31Biblioteca Digital de Teses e Dissertações da UFRPE - Universidade Federal Rural de Pernambuco (UFRPE)false
dc.title.por.fl_str_mv Polimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, Brasil
dc.title.alternative.eng.fl_str_mv Polymorphism of the GoLA-DRB.2 gene and detection of Mycoplasma agalactiae and Mycoplasma mycoides cluster in goat herds in the states of Pernambuco and Paraíba, Brazil
title Polimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, Brasil
spellingShingle Polimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, Brasil
VILAÇA, Luciana Florêncio
Mycoplasma agalactiae
Mycoplasma mycoides
Goat Lymphocyte Antigen
Polimorfismo
Agalactia contagiosa
Caprino
CIENCIAS AGRARIAS::ZOOTECNIA
title_short Polimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, Brasil
title_full Polimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, Brasil
title_fullStr Polimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, Brasil
title_full_unstemmed Polimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, Brasil
title_sort Polimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, Brasil
author VILAÇA, Luciana Florêncio
author_facet VILAÇA, Luciana Florêncio
author_role author
dc.contributor.advisor1.fl_str_mv BARBOSA, Severino Benone Paes
dc.contributor.advisor-co1.fl_str_mv SILVA, Elizabete Rodrigues da
dc.contributor.advisor-co2.fl_str_mv SANTORO, Kleber Régis
dc.contributor.referee1.fl_str_mv FRAGA, Angelina Bossi
dc.contributor.referee2.fl_str_mv BRASIL, Lúcia Helena de Albuquerque
dc.contributor.referee3.fl_str_mv MAIA, Maria de Mascena Diniz
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/0738544028762008
dc.contributor.author.fl_str_mv VILAÇA, Luciana Florêncio
contributor_str_mv BARBOSA, Severino Benone Paes
SILVA, Elizabete Rodrigues da
SANTORO, Kleber Régis
FRAGA, Angelina Bossi
BRASIL, Lúcia Helena de Albuquerque
MAIA, Maria de Mascena Diniz
dc.subject.por.fl_str_mv Mycoplasma agalactiae
Mycoplasma mycoides
Goat Lymphocyte Antigen
Polimorfismo
Agalactia contagiosa
Caprino
topic Mycoplasma agalactiae
Mycoplasma mycoides
Goat Lymphocyte Antigen
Polimorfismo
Agalactia contagiosa
Caprino
CIENCIAS AGRARIAS::ZOOTECNIA
dc.subject.cnpq.fl_str_mv CIENCIAS AGRARIAS::ZOOTECNIA
description The program of selection of goats with milk aptitude has been focused on the increase in milk quantity, neglecting factors related to resistance to diseases and milk composition. This behavior has led to studies aimed at the rapid detection of microorganisms and the identification of genes or chromosomal regions related to infectious diseases of the mammary gland. The objective of the present thesis was to detect Mycoplasma agalactiae (Ma) and Mycoplasma mycoides cluster (Mmcluster) in goat milk samples and to evaluate the composition and counting of somatic cells from Ma and Mmcluster positive animals (Experiment 1). In addition, we sought to identify Goat Lymphocyte Antigen (GoLA-DRB.2) gene polymorphisms and to associate them with goat milk characteristics (Experiment 2). To perform the experiment 1, 373 samples of goat milk of different races belonging to herds located in the states of Pernambuco and Paraiba were collected. The genomic DNA of the milk samples was extracted by the silica / guanidine isothiocyanate method, followed by the generic and species-specific amplification by polymerase chain reaction. Identification of the presence or absence of gene products was performed by direct observation of the bands of the PCR products visualized on electrophoresis gel. Analysis of variance and comparison tests of averages were performed to verify the effects of positivity on somatic cell composition and counting characteristics. The frequencies for Ma and Mmcluster were 43.21% and 5.70%, respectively, in the herds evaluated. The breeding system was considered as risk factors (p <0.001) and the racial pattern (p<0.001). Ma positive samples were detected in all genetic groups, with higher occurrence in the and Marota race. Positive samples for Mmcluster were only observed in Moxotó (18.28%), Parda Sertaneja (1.92%) and SPRD (3.12%) rats. In the study of association between positivity and milk composition, a statistical difference was observed for protein, casein and somatic cell counts. The detection of Mycoplasma in samples of goat milk suggests the introduction of infected animals in the evaluated herds, as well as the possible contact with the etiological agents in fairs and exhibitions. In addition, the breeding system adopted on the property influences the spread of the infection in the herd. For the execution of Experiment 2, a total of 181 female goats of different races from the state of Pernambuco and Paraiba were selected. Milk samples were harvested and extracted from genomic DNA as described in Experiment 1. The genotyping of the animals for the 285bp fragment of the GoLA-DRB.2 gene was the result of amplification by PCR-RFLP technique, using the enzymes of Restriction PstI and TaqI. The allelic frequency found for the total population using the PstI enzyme was A equal to 0.7254 and B at 0.2746, with the frequencies of the AA, AB and BB genotypes being 0.6740, 0.0387 and 0, 2873 respectively. The allele frequencies obtained from the digestion with the TaqI enzyme were C = 0.8149 and D = 0.1851, with the frequencies of the genotypes: 0.7403 (CC), 0.1492 (CD) and 0.1105 ( DD), with predominance of the CC genotype in all the racial standards evaluated. The observed Heterozygosity values were lower than those found for expected Heterozygosity in all tested populations with herds out of Hardy-Weinberg equilibrium. There was significant genetic variation between races, among individuals of the same race and within the population. There was no significant difference between genotypes and haplotype patterns on the values of fat, protein, lactose, total solids, casein and somatic cell counts. The GoLA-DRB.2 gene was polymorphic in the evaluation with the PstI and TaqI enzymes studied but had no effect on any of the somatic cell composition and counting characteristics evaluated.
publishDate 2017
dc.date.accessioned.fl_str_mv 2017-05-29T14:12:31Z
dc.date.issued.fl_str_mv 2017-02-21
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format doctoralThesis
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dc.identifier.citation.fl_str_mv VILAÇA, Luciana Florêncio. Polimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, Brasil. 2017. 85 f. Tese (Programa de Pós-Graduação em Zootecnia) - Universidade Federal Rural de Pernambuco, Recife.
dc.identifier.uri.fl_str_mv http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6947
identifier_str_mv VILAÇA, Luciana Florêncio. Polimorfismo do gene GoLA-DRB.2 e detecção de Mycoplasma agalactiae e Mycoplasma mycoides cluster em rebanhos caprinos nos estados de Pernambuco e Paraíba, Brasil. 2017. 85 f. Tese (Programa de Pós-Graduação em Zootecnia) - Universidade Federal Rural de Pernambuco, Recife.
url http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6947
dc.language.iso.fl_str_mv por
language por
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dc.relation.confidence.fl_str_mv 600
600
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600
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dc.relation.cnpq.fl_str_mv 1346858981270845602
dc.relation.sponsorship.fl_str_mv 2075167498588264571
-2555911436985713659
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal Rural de Pernambuco
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Zootecnia
dc.publisher.initials.fl_str_mv UFRPE
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Departamento de Zootecnia
publisher.none.fl_str_mv Universidade Federal Rural de Pernambuco
dc.source.none.fl_str_mv reponame:Biblioteca Digital de Teses e Dissertações da UFRPE
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reponame_str Biblioteca Digital de Teses e Dissertações da UFRPE
collection Biblioteca Digital de Teses e Dissertações da UFRPE
bitstream.url.fl_str_mv http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/6947/1/license.txt
http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/6947/2/Luciana+Florencio+Vilaca.pdf
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repository.name.fl_str_mv Biblioteca Digital de Teses e Dissertações da UFRPE - Universidade Federal Rural de Pernambuco (UFRPE)
repository.mail.fl_str_mv bdtd@ufrpe.br ||bdtd@ufrpe.br
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