Molecular analysis of a California strain of Rupestris stem pitting-associated virus isolated from declining Syrah grapevines

Detalhes bibliográficos
Autor(a) principal: LIMA, M. F.
Data de Publicação: 2006
Outros Autores: ALKOWNI, R., UYEMOTO, J. K., GOLINO, D., OSMAN, F., ROWHANI, A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/157927
Resumo: The sequence of the genome of a Rupestris stem pitting-associated virus (RSPaV) isolated from a declining Syrah grapevine in California, designated the Syrah strain (RSPaV-SY) was determined. The genome of this strain had an overall nucleotide identity os 77% in comparison with RSPaV sequences in GenBank; the coat protein was the most conservd gene among RSPaV sequences among replicase was the least conserved gene. Phylogenetic analysis of partial coat protein and replicase gene sequences showed RSPaV-SY clustrd independently from the majority of RSPaV isolates.
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spelling Molecular analysis of a California strain of Rupestris stem pitting-associated virus isolated from declining Syrah grapevinesUva para vinhoAnálise molecularGrapeUvaDoençaVariedadeVírusCaliforniaThe sequence of the genome of a Rupestris stem pitting-associated virus (RSPaV) isolated from a declining Syrah grapevine in California, designated the Syrah strain (RSPaV-SY) was determined. The genome of this strain had an overall nucleotide identity os 77% in comparison with RSPaV sequences in GenBank; the coat protein was the most conservd gene among RSPaV sequences among replicase was the least conserved gene. Phylogenetic analysis of partial coat protein and replicase gene sequences showed RSPaV-SY clustrd independently from the majority of RSPaV isolates.MIRTES FREITAS LIMA, CPATSA.LIMA, M. F.ALKOWNI, R.UYEMOTO, J. K.GOLINO, D.OSMAN, F.ROWHANI, A.2018-05-18T00:34:12Z2018-05-18T00:34:12Z2006-12-1920062018-05-18T00:34:12Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleArchives of Virology, New York, v. 151, p. 1889-1894, 2006.http://www.alice.cnptia.embrapa.br/alice/handle/doc/157927enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2018-05-18T00:34:18Zoai:www.alice.cnptia.embrapa.br:doc/157927Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542018-05-18T00:34:18falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542018-05-18T00:34:18Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Molecular analysis of a California strain of Rupestris stem pitting-associated virus isolated from declining Syrah grapevines
title Molecular analysis of a California strain of Rupestris stem pitting-associated virus isolated from declining Syrah grapevines
spellingShingle Molecular analysis of a California strain of Rupestris stem pitting-associated virus isolated from declining Syrah grapevines
LIMA, M. F.
Uva para vinho
Análise molecular
Grape
Uva
Doença
Variedade
Vírus
California
title_short Molecular analysis of a California strain of Rupestris stem pitting-associated virus isolated from declining Syrah grapevines
title_full Molecular analysis of a California strain of Rupestris stem pitting-associated virus isolated from declining Syrah grapevines
title_fullStr Molecular analysis of a California strain of Rupestris stem pitting-associated virus isolated from declining Syrah grapevines
title_full_unstemmed Molecular analysis of a California strain of Rupestris stem pitting-associated virus isolated from declining Syrah grapevines
title_sort Molecular analysis of a California strain of Rupestris stem pitting-associated virus isolated from declining Syrah grapevines
author LIMA, M. F.
author_facet LIMA, M. F.
ALKOWNI, R.
UYEMOTO, J. K.
GOLINO, D.
OSMAN, F.
ROWHANI, A.
author_role author
author2 ALKOWNI, R.
UYEMOTO, J. K.
GOLINO, D.
OSMAN, F.
ROWHANI, A.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv MIRTES FREITAS LIMA, CPATSA.
dc.contributor.author.fl_str_mv LIMA, M. F.
ALKOWNI, R.
UYEMOTO, J. K.
GOLINO, D.
OSMAN, F.
ROWHANI, A.
dc.subject.por.fl_str_mv Uva para vinho
Análise molecular
Grape
Uva
Doença
Variedade
Vírus
California
topic Uva para vinho
Análise molecular
Grape
Uva
Doença
Variedade
Vírus
California
description The sequence of the genome of a Rupestris stem pitting-associated virus (RSPaV) isolated from a declining Syrah grapevine in California, designated the Syrah strain (RSPaV-SY) was determined. The genome of this strain had an overall nucleotide identity os 77% in comparison with RSPaV sequences in GenBank; the coat protein was the most conservd gene among RSPaV sequences among replicase was the least conserved gene. Phylogenetic analysis of partial coat protein and replicase gene sequences showed RSPaV-SY clustrd independently from the majority of RSPaV isolates.
publishDate 2006
dc.date.none.fl_str_mv 2006-12-19
2006
2018-05-18T00:34:12Z
2018-05-18T00:34:12Z
2018-05-18T00:34:12Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Archives of Virology, New York, v. 151, p. 1889-1894, 2006.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/157927
identifier_str_mv Archives of Virology, New York, v. 151, p. 1889-1894, 2006.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/157927
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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