Kalirin: a novel genetic risk factor for ischemic stroke

Detalhes bibliográficos
Autor(a) principal: Krug, T
Data de Publicação: 2010
Outros Autores: Manso, H, Gouveia, L, Sobral, J, Xavier, J, Albergaria, I, Gaspar, G, Correia, M, Viana-Baptista, M, Simões, R, Pinto, A, Taipa, R, Ferreira, C, Fontes, J, Silva, M, Gabriel, J, Matos, I, Lopes, G, Ferro, J, Vicente, A, Oliveira, S
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.10/410
Resumo: Cerebrovascular and cardiovascular diseases are the leading causes of death and disability worldwide. They are complex disorders resulting from the interplay of genetic and environmental factors, and may share several susceptibility genes. Several recent studies have implicated variants of the Kalirin (KALRN) gene with susceptibility to cardiovascular and metabolic phenotypes, but no studies have yet been performed in stroke patients. KALRN is involved, among others, in the inhibition of inducible nitric oxide synthase, in the regulation of ischemic signal transduction, and in neuronal morphogenesis, plasticity, and stability. The goal of the present study was to determine whether SNPs in the KALRN region on 3q13, which includes the Ropporin gene (ROPN1), predispose to ischemic stroke (IS) in a cohort of Portuguese patients and controls. We genotyped 34 tagging SNPs in the KALRN and ROPN1 chromosomal region on 565 IS patients and 517 unrelated controls, and performed genotype imputation for 405 markers on chromosome 3. We tested the single-marker association of these SNPs with IS. One SNP (rs4499545) in the ROPN1-KALRN intergenic region and two SNPs in KALRN (rs17286604 and rs11712619) showed significant (P < 0.05) allelic and genotypic (unadjusted and adjusted for hypertension, diabetes, and ever smoking) association with IS risk. Thirty-two imputed SNPs also showed an association at P < 0.05, and actual genotyping of three of these polymorphisms (rs7620580, rs6438833, and rs11712039) validated their association. Furthermore, rs11712039 was associated with IS (0.001 < P < 0.01) in a recent well-powered genomewide association study (Ikram et al. 2009). These studies suggest that variants in the KALRN gene region constitute risk factors for stroke and that KALRN may represent a common risk factor for vascular diseases.
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spelling Kalirin: a novel genetic risk factor for ischemic strokeIsquémia cerebralAcidente vascular cerebralFactores de riscoIschemic strokeKalirinCerebrovascular and cardiovascular diseases are the leading causes of death and disability worldwide. They are complex disorders resulting from the interplay of genetic and environmental factors, and may share several susceptibility genes. Several recent studies have implicated variants of the Kalirin (KALRN) gene with susceptibility to cardiovascular and metabolic phenotypes, but no studies have yet been performed in stroke patients. KALRN is involved, among others, in the inhibition of inducible nitric oxide synthase, in the regulation of ischemic signal transduction, and in neuronal morphogenesis, plasticity, and stability. The goal of the present study was to determine whether SNPs in the KALRN region on 3q13, which includes the Ropporin gene (ROPN1), predispose to ischemic stroke (IS) in a cohort of Portuguese patients and controls. We genotyped 34 tagging SNPs in the KALRN and ROPN1 chromosomal region on 565 IS patients and 517 unrelated controls, and performed genotype imputation for 405 markers on chromosome 3. We tested the single-marker association of these SNPs with IS. One SNP (rs4499545) in the ROPN1-KALRN intergenic region and two SNPs in KALRN (rs17286604 and rs11712619) showed significant (P < 0.05) allelic and genotypic (unadjusted and adjusted for hypertension, diabetes, and ever smoking) association with IS risk. Thirty-two imputed SNPs also showed an association at P < 0.05, and actual genotyping of three of these polymorphisms (rs7620580, rs6438833, and rs11712039) validated their association. Furthermore, rs11712039 was associated with IS (0.001 < P < 0.01) in a recent well-powered genomewide association study (Ikram et al. 2009). These studies suggest that variants in the KALRN gene region constitute risk factors for stroke and that KALRN may represent a common risk factor for vascular diseases.SpringerRepositório do Hospital Prof. Doutor Fernando FonsecaKrug, TManso, HGouveia, LSobral, JXavier, JAlbergaria, IGaspar, GCorreia, MViana-Baptista, MSimões, RPinto, ATaipa, RFerreira, CFontes, JSilva, MGabriel, JMatos, ILopes, GFerro, JVicente, AOliveira, S2011-08-30T10:53:24Z2010-01-01T00:00:00Z2010-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.10/410engHum Genet. 2010 Mar;127(5):513-230340-6717info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-09-20T15:51:20Zoai:repositorio.hff.min-saude.pt:10400.10/410Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:51:42.678429Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Kalirin: a novel genetic risk factor for ischemic stroke
title Kalirin: a novel genetic risk factor for ischemic stroke
spellingShingle Kalirin: a novel genetic risk factor for ischemic stroke
Krug, T
Isquémia cerebral
Acidente vascular cerebral
Factores de risco
Ischemic stroke
Kalirin
title_short Kalirin: a novel genetic risk factor for ischemic stroke
title_full Kalirin: a novel genetic risk factor for ischemic stroke
title_fullStr Kalirin: a novel genetic risk factor for ischemic stroke
title_full_unstemmed Kalirin: a novel genetic risk factor for ischemic stroke
title_sort Kalirin: a novel genetic risk factor for ischemic stroke
author Krug, T
author_facet Krug, T
Manso, H
Gouveia, L
Sobral, J
Xavier, J
Albergaria, I
Gaspar, G
Correia, M
Viana-Baptista, M
Simões, R
Pinto, A
Taipa, R
Ferreira, C
Fontes, J
Silva, M
Gabriel, J
Matos, I
Lopes, G
Ferro, J
Vicente, A
Oliveira, S
author_role author
author2 Manso, H
Gouveia, L
Sobral, J
Xavier, J
Albergaria, I
Gaspar, G
Correia, M
Viana-Baptista, M
Simões, R
Pinto, A
Taipa, R
Ferreira, C
Fontes, J
Silva, M
Gabriel, J
Matos, I
Lopes, G
Ferro, J
Vicente, A
Oliveira, S
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório do Hospital Prof. Doutor Fernando Fonseca
dc.contributor.author.fl_str_mv Krug, T
Manso, H
Gouveia, L
Sobral, J
Xavier, J
Albergaria, I
Gaspar, G
Correia, M
Viana-Baptista, M
Simões, R
Pinto, A
Taipa, R
Ferreira, C
Fontes, J
Silva, M
Gabriel, J
Matos, I
Lopes, G
Ferro, J
Vicente, A
Oliveira, S
dc.subject.por.fl_str_mv Isquémia cerebral
Acidente vascular cerebral
Factores de risco
Ischemic stroke
Kalirin
topic Isquémia cerebral
Acidente vascular cerebral
Factores de risco
Ischemic stroke
Kalirin
description Cerebrovascular and cardiovascular diseases are the leading causes of death and disability worldwide. They are complex disorders resulting from the interplay of genetic and environmental factors, and may share several susceptibility genes. Several recent studies have implicated variants of the Kalirin (KALRN) gene with susceptibility to cardiovascular and metabolic phenotypes, but no studies have yet been performed in stroke patients. KALRN is involved, among others, in the inhibition of inducible nitric oxide synthase, in the regulation of ischemic signal transduction, and in neuronal morphogenesis, plasticity, and stability. The goal of the present study was to determine whether SNPs in the KALRN region on 3q13, which includes the Ropporin gene (ROPN1), predispose to ischemic stroke (IS) in a cohort of Portuguese patients and controls. We genotyped 34 tagging SNPs in the KALRN and ROPN1 chromosomal region on 565 IS patients and 517 unrelated controls, and performed genotype imputation for 405 markers on chromosome 3. We tested the single-marker association of these SNPs with IS. One SNP (rs4499545) in the ROPN1-KALRN intergenic region and two SNPs in KALRN (rs17286604 and rs11712619) showed significant (P < 0.05) allelic and genotypic (unadjusted and adjusted for hypertension, diabetes, and ever smoking) association with IS risk. Thirty-two imputed SNPs also showed an association at P < 0.05, and actual genotyping of three of these polymorphisms (rs7620580, rs6438833, and rs11712039) validated their association. Furthermore, rs11712039 was associated with IS (0.001 < P < 0.01) in a recent well-powered genomewide association study (Ikram et al. 2009). These studies suggest that variants in the KALRN gene region constitute risk factors for stroke and that KALRN may represent a common risk factor for vascular diseases.
publishDate 2010
dc.date.none.fl_str_mv 2010-01-01T00:00:00Z
2010-01-01T00:00:00Z
2011-08-30T10:53:24Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.10/410
url http://hdl.handle.net/10400.10/410
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Hum Genet. 2010 Mar;127(5):513-23
0340-6717
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Springer
publisher.none.fl_str_mv Springer
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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