Genetic diversity assessment in Portuguese Olea europea L. cultivars using the combinatorial β-Tubulin-based polymorphism (cTBP) marker system

Detalhes bibliográficos
Autor(a) principal: Cardoso, Hélia
Data de Publicação: 2018
Outros Autores: Ferreira, Alexandre, Macedo, Elisete, Peixe, Augusto, Arnholdt-Schmitt, Birgit
Tipo de documento: Artigo de conferência
Idioma: por
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10174/23316
Resumo: In Olea europaea L. subsp. europaea var. sativa one of the most outstanding issues for commercial production and product certification lies in clarifying genetic relationships among the highly diverse, cultivated olive material. This report validates the applicability of the combinatorial β-tubulin based polymorphism (cTBP) molecular marker system for Olea europaea L. genotypes. The method is based on the analysis of length polymorphisms resulting from combined amplification of introns 1 and 2 of the β-tubulin genes, followed by fragment resolution in polyacrylamide electrophoresis gel. When compared with other molecular tools the technique is advantageous in terms of low costs and time consumption. The cTBP method was applied on a collection of morphologically classified olive trees (Coleção Nacional de Referência de Cultivares de Oliveira) that are established in the ‘Instituto Nacional de Investigação Agrária e Veterinária’ (INIAV, Elvas, Portugal). The results show that the cTBP marker system is useful to trace genetic variability and phylogenetic relationships in olive material thus able to help clarifying misleading classifications based on morphological characterization. Therefore, the method here presented can be recommended as an efficient tool for commercial applications and scientific studies that aim to verify genetic relationships in Olea europaea L.
id RCAP_16f6caf6e3fe27a26d17dfd0717841a3
oai_identifier_str oai:dspace.uevora.pt:10174/23316
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling Genetic diversity assessment in Portuguese Olea europea L. cultivars using the combinatorial β-Tubulin-based polymorphism (cTBP) marker systemEPIC-PCRgenotypefingerprintingintron length polymorphismolivetubulinIn Olea europaea L. subsp. europaea var. sativa one of the most outstanding issues for commercial production and product certification lies in clarifying genetic relationships among the highly diverse, cultivated olive material. This report validates the applicability of the combinatorial β-tubulin based polymorphism (cTBP) molecular marker system for Olea europaea L. genotypes. The method is based on the analysis of length polymorphisms resulting from combined amplification of introns 1 and 2 of the β-tubulin genes, followed by fragment resolution in polyacrylamide electrophoresis gel. When compared with other molecular tools the technique is advantageous in terms of low costs and time consumption. The cTBP method was applied on a collection of morphologically classified olive trees (Coleção Nacional de Referência de Cultivares de Oliveira) that are established in the ‘Instituto Nacional de Investigação Agrária e Veterinária’ (INIAV, Elvas, Portugal). The results show that the cTBP marker system is useful to trace genetic variability and phylogenetic relationships in olive material thus able to help clarifying misleading classifications based on morphological characterization. Therefore, the method here presented can be recommended as an efficient tool for commercial applications and scientific studies that aim to verify genetic relationships in Olea europaea L.Associação Portuguesa de Horticultura (APH)2018-07-17T12:03:35Z2018-07-172018-03-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObjecthttp://hdl.handle.net/10174/23316http://hdl.handle.net/10174/23316porCardoso, H., Ferreira, A., Macedo, E. S., Peixe, A., Arnholdt-Schmitt, Birgit. (2018). Genetic diversity assessment in Portuguese Olea europea L. cultivars using the combinatorial β-Tubulin-based polymorphism (cTBP) marker system. Congresso Luso Brasileiro de Horticultra, Lisboa 1-4 Novembro de 2017, Actas Portuguesas de Horticultura, 29(1ed.), 545-552.978-972-8936-28-0simnaonaoFIThcardoso@uevora.ptndndapeixe@uevora.ptnd586Cardoso, HéliaFerreira, AlexandreMacedo, ElisetePeixe, AugustoArnholdt-Schmitt, Birgitinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-03T19:15:17Zoai:dspace.uevora.pt:10174/23316Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:14:10.050910Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Genetic diversity assessment in Portuguese Olea europea L. cultivars using the combinatorial β-Tubulin-based polymorphism (cTBP) marker system
title Genetic diversity assessment in Portuguese Olea europea L. cultivars using the combinatorial β-Tubulin-based polymorphism (cTBP) marker system
spellingShingle Genetic diversity assessment in Portuguese Olea europea L. cultivars using the combinatorial β-Tubulin-based polymorphism (cTBP) marker system
Cardoso, Hélia
EPIC-PCR
genotype
fingerprinting
intron length polymorphism
olive
tubulin
title_short Genetic diversity assessment in Portuguese Olea europea L. cultivars using the combinatorial β-Tubulin-based polymorphism (cTBP) marker system
title_full Genetic diversity assessment in Portuguese Olea europea L. cultivars using the combinatorial β-Tubulin-based polymorphism (cTBP) marker system
title_fullStr Genetic diversity assessment in Portuguese Olea europea L. cultivars using the combinatorial β-Tubulin-based polymorphism (cTBP) marker system
title_full_unstemmed Genetic diversity assessment in Portuguese Olea europea L. cultivars using the combinatorial β-Tubulin-based polymorphism (cTBP) marker system
title_sort Genetic diversity assessment in Portuguese Olea europea L. cultivars using the combinatorial β-Tubulin-based polymorphism (cTBP) marker system
author Cardoso, Hélia
author_facet Cardoso, Hélia
Ferreira, Alexandre
Macedo, Elisete
Peixe, Augusto
Arnholdt-Schmitt, Birgit
author_role author
author2 Ferreira, Alexandre
Macedo, Elisete
Peixe, Augusto
Arnholdt-Schmitt, Birgit
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Cardoso, Hélia
Ferreira, Alexandre
Macedo, Elisete
Peixe, Augusto
Arnholdt-Schmitt, Birgit
dc.subject.por.fl_str_mv EPIC-PCR
genotype
fingerprinting
intron length polymorphism
olive
tubulin
topic EPIC-PCR
genotype
fingerprinting
intron length polymorphism
olive
tubulin
description In Olea europaea L. subsp. europaea var. sativa one of the most outstanding issues for commercial production and product certification lies in clarifying genetic relationships among the highly diverse, cultivated olive material. This report validates the applicability of the combinatorial β-tubulin based polymorphism (cTBP) molecular marker system for Olea europaea L. genotypes. The method is based on the analysis of length polymorphisms resulting from combined amplification of introns 1 and 2 of the β-tubulin genes, followed by fragment resolution in polyacrylamide electrophoresis gel. When compared with other molecular tools the technique is advantageous in terms of low costs and time consumption. The cTBP method was applied on a collection of morphologically classified olive trees (Coleção Nacional de Referência de Cultivares de Oliveira) that are established in the ‘Instituto Nacional de Investigação Agrária e Veterinária’ (INIAV, Elvas, Portugal). The results show that the cTBP marker system is useful to trace genetic variability and phylogenetic relationships in olive material thus able to help clarifying misleading classifications based on morphological characterization. Therefore, the method here presented can be recommended as an efficient tool for commercial applications and scientific studies that aim to verify genetic relationships in Olea europaea L.
publishDate 2018
dc.date.none.fl_str_mv 2018-07-17T12:03:35Z
2018-07-17
2018-03-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/conferenceObject
format conferenceObject
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10174/23316
http://hdl.handle.net/10174/23316
url http://hdl.handle.net/10174/23316
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv Cardoso, H., Ferreira, A., Macedo, E. S., Peixe, A., Arnholdt-Schmitt, Birgit. (2018). Genetic diversity assessment in Portuguese Olea europea L. cultivars using the combinatorial β-Tubulin-based polymorphism (cTBP) marker system. Congresso Luso Brasileiro de Horticultra, Lisboa 1-4 Novembro de 2017, Actas Portuguesas de Horticultura, 29(1ed.), 545-552.
978-972-8936-28-0
sim
nao
nao
FIT
hcardoso@uevora.pt
nd
nd
apeixe@uevora.pt
nd
586
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Associação Portuguesa de Horticultura (APH)
publisher.none.fl_str_mv Associação Portuguesa de Horticultura (APH)
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799136623505440768