Diet leaves a genetic signature in a keystone member of the gut microbiota

Detalhes bibliográficos
Autor(a) principal: Dapa, Tanja
Data de Publicação: 2022
Outros Autores: Ramiro, Ricardo Serotte, Pedro, Miguel Filipe, Gordo, Isabel, Xavier, Karina Bivar
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.7/976
Resumo: Switching from a low-fat and high-fiber diet to a Western-style high-fat and high-sugar diet causes microbiota imbalances that underlay many pathological conditions (i.e., dysbiosis). Although the effects of dietary changes on microbiota composition and functions are well documented, their impact in gut bacterial evolution remains unexplored. We followed the emergence of mutations in Bacteroides thetaiotaomicron, a prevalent fiber-degrading microbiota member, upon colonization of the murine gut under different dietary regimens. B. thetaiotaomicron evolved rapidly in the gut and Western-style diet selected for mutations that promote degradation of mucin-derived glycans. Periodic dietary changes caused fluctuations in the frequency of such mutations and were associated with metabolic shifts, resulting in the maintenance of higher intraspecies genetic diversity compared to constant dietary regimens. These results show that dietary changes leave a genetic signature in microbiome members and suggest that B. thetaiotaomicron genetic diversity could be a biomarker for dietary differences among individuals.
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spelling Diet leaves a genetic signature in a keystone member of the gut microbiotamicrobiota, high-fat high-sugar diet, Western-style diet, microbiota evolution, gut dysbiosis, Bacteroides thetaiotaomicron, Bacteroidetes, gut metabolon, gut ecology, multi-omics analysesSwitching from a low-fat and high-fiber diet to a Western-style high-fat and high-sugar diet causes microbiota imbalances that underlay many pathological conditions (i.e., dysbiosis). Although the effects of dietary changes on microbiota composition and functions are well documented, their impact in gut bacterial evolution remains unexplored. We followed the emergence of mutations in Bacteroides thetaiotaomicron, a prevalent fiber-degrading microbiota member, upon colonization of the murine gut under different dietary regimens. B. thetaiotaomicron evolved rapidly in the gut and Western-style diet selected for mutations that promote degradation of mucin-derived glycans. Periodic dietary changes caused fluctuations in the frequency of such mutations and were associated with metabolic shifts, resulting in the maintenance of higher intraspecies genetic diversity compared to constant dietary regimens. These results show that dietary changes leave a genetic signature in microbiome members and suggest that B. thetaiotaomicron genetic diversity could be a biomarker for dietary differences among individuals.ARCADapa, TanjaRamiro, Ricardo SerottePedro, Miguel FilipeGordo, IsabelXavier, Karina Bivar2022-03-10T15:55:52Z20222022-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.7/976eng10.1016/j.chom.2022.01.002info:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-29T14:35:23Zoai:arca.igc.gulbenkian.pt:10400.7/976Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:12:09.914430Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Diet leaves a genetic signature in a keystone member of the gut microbiota
title Diet leaves a genetic signature in a keystone member of the gut microbiota
spellingShingle Diet leaves a genetic signature in a keystone member of the gut microbiota
Dapa, Tanja
microbiota, high-fat high-sugar diet, Western-style diet, microbiota evolution, gut dysbiosis, Bacteroides thetaiotaomicron, Bacteroidetes, gut metabolon, gut ecology, multi-omics analyses
title_short Diet leaves a genetic signature in a keystone member of the gut microbiota
title_full Diet leaves a genetic signature in a keystone member of the gut microbiota
title_fullStr Diet leaves a genetic signature in a keystone member of the gut microbiota
title_full_unstemmed Diet leaves a genetic signature in a keystone member of the gut microbiota
title_sort Diet leaves a genetic signature in a keystone member of the gut microbiota
author Dapa, Tanja
author_facet Dapa, Tanja
Ramiro, Ricardo Serotte
Pedro, Miguel Filipe
Gordo, Isabel
Xavier, Karina Bivar
author_role author
author2 Ramiro, Ricardo Serotte
Pedro, Miguel Filipe
Gordo, Isabel
Xavier, Karina Bivar
author2_role author
author
author
author
dc.contributor.none.fl_str_mv ARCA
dc.contributor.author.fl_str_mv Dapa, Tanja
Ramiro, Ricardo Serotte
Pedro, Miguel Filipe
Gordo, Isabel
Xavier, Karina Bivar
dc.subject.por.fl_str_mv microbiota, high-fat high-sugar diet, Western-style diet, microbiota evolution, gut dysbiosis, Bacteroides thetaiotaomicron, Bacteroidetes, gut metabolon, gut ecology, multi-omics analyses
topic microbiota, high-fat high-sugar diet, Western-style diet, microbiota evolution, gut dysbiosis, Bacteroides thetaiotaomicron, Bacteroidetes, gut metabolon, gut ecology, multi-omics analyses
description Switching from a low-fat and high-fiber diet to a Western-style high-fat and high-sugar diet causes microbiota imbalances that underlay many pathological conditions (i.e., dysbiosis). Although the effects of dietary changes on microbiota composition and functions are well documented, their impact in gut bacterial evolution remains unexplored. We followed the emergence of mutations in Bacteroides thetaiotaomicron, a prevalent fiber-degrading microbiota member, upon colonization of the murine gut under different dietary regimens. B. thetaiotaomicron evolved rapidly in the gut and Western-style diet selected for mutations that promote degradation of mucin-derived glycans. Periodic dietary changes caused fluctuations in the frequency of such mutations and were associated with metabolic shifts, resulting in the maintenance of higher intraspecies genetic diversity compared to constant dietary regimens. These results show that dietary changes leave a genetic signature in microbiome members and suggest that B. thetaiotaomicron genetic diversity could be a biomarker for dietary differences among individuals.
publishDate 2022
dc.date.none.fl_str_mv 2022-03-10T15:55:52Z
2022
2022-01-01T00:00:00Z
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.7/976
url http://hdl.handle.net/10400.7/976
dc.language.iso.fl_str_mv eng
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dc.relation.none.fl_str_mv 10.1016/j.chom.2022.01.002
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