m6A RNA Methylation in marine plants: first insights and relevance for biological rhythms

Detalhes bibliográficos
Autor(a) principal: Ruocco, Miriam
Data de Publicação: 2020
Outros Autores: Ambrosino, Luca, Jahnke, Marlene, Chiusano, Maria, Barrote, Isabel, Procaccini, Gabriele, Silva, João, Dattolo, Emanuela
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/14845
Resumo: Circadian regulations are essential for enabling organisms to synchronize physiology with environmental light-dark cycles. Post-transcriptional RNA modifications still represent an understudied level of gene expression regulation in plants, although they could play crucial roles in environmental adaptation. N6-methyl-adenosine (m6A) is the most prevalent mRNA modification, established by "writer" and "eraser" proteins. It influences the clockwork in several taxa, but only few studies have been conducted in plants and none in marine plants. Here, we provided a first inventory of m6A-related genes in seagrasses and investigated daily changes in the global RNA methylation and transcript levels of writers and erasers in Cymodocea nodosa and Zostera marina. Both species showed methylation peaks during the dark period under the same photoperiod, despite exhibiting asynchronous changes in the m6A profile and related gene expression during a 24-h cycle. At contrasting latitudes, Z. marina populations displayed overlapping daily patterns of the m6A level and related gene expression. The observed rhythms are characteristic for each species and similar in populations of the same species with different photoperiods, suggesting the existence of an endogenous circadian control. Globally, our results indicate that m6A RNA methylation could widely contribute to circadian regulation in seagrasses, potentially affecting the photo-biological behaviour of these plants.
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spelling m6A RNA Methylation in marine plants: first insights and relevance for biological rhythmsMarine plantsm6A-methylationEpitranscriptomeRNA methyltransferasesCircadian clockCircadian regulations are essential for enabling organisms to synchronize physiology with environmental light-dark cycles. Post-transcriptional RNA modifications still represent an understudied level of gene expression regulation in plants, although they could play crucial roles in environmental adaptation. N6-methyl-adenosine (m6A) is the most prevalent mRNA modification, established by "writer" and "eraser" proteins. It influences the clockwork in several taxa, but only few studies have been conducted in plants and none in marine plants. Here, we provided a first inventory of m6A-related genes in seagrasses and investigated daily changes in the global RNA methylation and transcript levels of writers and erasers in Cymodocea nodosa and Zostera marina. Both species showed methylation peaks during the dark period under the same photoperiod, despite exhibiting asynchronous changes in the m6A profile and related gene expression during a 24-h cycle. At contrasting latitudes, Z. marina populations displayed overlapping daily patterns of the m6A level and related gene expression. The observed rhythms are characteristic for each species and similar in populations of the same species with different photoperiods, suggesting the existence of an endogenous circadian control. Globally, our results indicate that m6A RNA methylation could widely contribute to circadian regulation in seagrasses, potentially affecting the photo-biological behaviour of these plants.FCT: UIDB/04326/2020MDPISapientiaRuocco, MiriamAmbrosino, LucaJahnke, MarleneChiusano, MariaBarrote, IsabelProcaccini, GabrieleSilva, JoãoDattolo, Emanuela2020-11-25T13:42:25Z20202020-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/14845eng1661-659610.3390/ijms21207508info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:27:11Zoai:sapientia.ualg.pt:10400.1/14845Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:05:48.357056Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv m6A RNA Methylation in marine plants: first insights and relevance for biological rhythms
title m6A RNA Methylation in marine plants: first insights and relevance for biological rhythms
spellingShingle m6A RNA Methylation in marine plants: first insights and relevance for biological rhythms
Ruocco, Miriam
Marine plants
m6A-methylation
Epitranscriptome
RNA methyltransferases
Circadian clock
title_short m6A RNA Methylation in marine plants: first insights and relevance for biological rhythms
title_full m6A RNA Methylation in marine plants: first insights and relevance for biological rhythms
title_fullStr m6A RNA Methylation in marine plants: first insights and relevance for biological rhythms
title_full_unstemmed m6A RNA Methylation in marine plants: first insights and relevance for biological rhythms
title_sort m6A RNA Methylation in marine plants: first insights and relevance for biological rhythms
author Ruocco, Miriam
author_facet Ruocco, Miriam
Ambrosino, Luca
Jahnke, Marlene
Chiusano, Maria
Barrote, Isabel
Procaccini, Gabriele
Silva, João
Dattolo, Emanuela
author_role author
author2 Ambrosino, Luca
Jahnke, Marlene
Chiusano, Maria
Barrote, Isabel
Procaccini, Gabriele
Silva, João
Dattolo, Emanuela
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Ruocco, Miriam
Ambrosino, Luca
Jahnke, Marlene
Chiusano, Maria
Barrote, Isabel
Procaccini, Gabriele
Silva, João
Dattolo, Emanuela
dc.subject.por.fl_str_mv Marine plants
m6A-methylation
Epitranscriptome
RNA methyltransferases
Circadian clock
topic Marine plants
m6A-methylation
Epitranscriptome
RNA methyltransferases
Circadian clock
description Circadian regulations are essential for enabling organisms to synchronize physiology with environmental light-dark cycles. Post-transcriptional RNA modifications still represent an understudied level of gene expression regulation in plants, although they could play crucial roles in environmental adaptation. N6-methyl-adenosine (m6A) is the most prevalent mRNA modification, established by "writer" and "eraser" proteins. It influences the clockwork in several taxa, but only few studies have been conducted in plants and none in marine plants. Here, we provided a first inventory of m6A-related genes in seagrasses and investigated daily changes in the global RNA methylation and transcript levels of writers and erasers in Cymodocea nodosa and Zostera marina. Both species showed methylation peaks during the dark period under the same photoperiod, despite exhibiting asynchronous changes in the m6A profile and related gene expression during a 24-h cycle. At contrasting latitudes, Z. marina populations displayed overlapping daily patterns of the m6A level and related gene expression. The observed rhythms are characteristic for each species and similar in populations of the same species with different photoperiods, suggesting the existence of an endogenous circadian control. Globally, our results indicate that m6A RNA methylation could widely contribute to circadian regulation in seagrasses, potentially affecting the photo-biological behaviour of these plants.
publishDate 2020
dc.date.none.fl_str_mv 2020-11-25T13:42:25Z
2020
2020-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/14845
url http://hdl.handle.net/10400.1/14845
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1661-6596
10.3390/ijms21207508
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dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
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